New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5435212	65 (1.240)	3 (0.060)	3/236	NT	4.6%	coding (100/2529 nt)	hrpB	ATP‑dependent helicase HrpB
	?	NC_002947	= 5435240	62 (1.230)					coding (72/2529 nt)	hrpB	ATP‑dependent helicase HrpB
Rejected: Frequency below/above cutoff threshold.

AGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5435094‑5435212 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggtGCTTGAAGCGCCGCCTGGCGCTGGCAAGACCACCCGCGTGCCACTGGCGCTGCTGCACGAACCGTGGCTGGCCGGGCAGAGCATCCTAATGCTCGAGCCACGGCGCCTGGCTGCGCGGGCAGCGGCCGAACGGCTGGCCAGTGAGCTG  <  NC_002947/5435240‑5435093                                                                                                                                                                                                                                                                             AGCTCACTCGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTGCTTGAAGCGCCGCCTGGCGCTGGCAAGACC                                                                                                                       <  1:1236205/150‑1                                                               GATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTGCTTGAAGCGCCGCCTGGCGCTGGCAAGACCACCC                                                                                                                   >  1:719022/1‑92                                                               GATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTGCTTGAAGCGCCGCCTGGCGCTGGCAAGACCACCC                                                                                                                   <  2:719022/92‑1                                                                                                                      GTGCTTGAAGCGCCGCCTGGCGCTGGCAAGACCACCCGCGTGCCACTGGCGCTGCTGCACGAACCGTGGCTGGCCGGGCAGAGCATCCTAATGCTCGAGCCACGGCGCCTGGCTGCGCGGGCAGCGGCCGAACGGCTGGCCAGTGAGCTG  <  2:224790/150‑1                                                                                                                                                                                                                                                                             AGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5435094‑5435212 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggtGCTTGAAGCGCCGCCTGGCGCTGGCAAGACCACCCGCGTGCCACTGGCGCTGCTGCACGAACCGTGGCTGGCCGGGCAGAGCATCCTAATGCTCGAGCCACGGCGCCTGGCTGCGCGGGCAGCGGCCGAACGGCTGGCCAGTGAGCTG  <  NC_002947/5435240‑5435093

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.