New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5435212	65 (1.240)	3 (0.060)	3/236	NT	4.6%	coding (100/2529 nt)	hrpB	ATP‑dependent helicase HrpB
	?	NC_002947	= 5435240	62 (1.230)					coding (72/2529 nt)	hrpB	ATP‑dependent helicase HrpB
Rejected: Frequency below/above cutoff threshold.

ACCCACCGTTTCCCCAACCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAATGAAATCATGGTGGTCCTCGAGCAGTCTCGCGAGTATAACGGCGAACCCAGCCTGCTC  >  NC_002947/5435066‑5435360                                                                                                                                                   |                                                                                                                                                     aCCCACCGTTTCCCCAACCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCtt                                                                                                                                                   <  1:1423755/150‑1 (MQ=255)   ccACCGTTTCCCCAACCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTTCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGc                                                                                                                                                 >  2:1296732/1‑150 (MQ=255)   ccACCGTTTCCCCAACCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGc                                                                                                                                                 >  2:1003436/1‑150 (MQ=255)   ccACCGTTTCCCCAACCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGc                                                                                                                                                 >  1:456310/1‑150 (MQ=255)   ccACCGTTTCCCCAACCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGc                                                                                                                                                 >  1:1221318/1‑150 (MQ=255)         tttCCCCAACCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAgcgc                                                                                                                                           <  1:997685/150‑1 (MQ=255)            ccagaaCCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCtt                                                                                                                                                   >  2:1371096/5‑139 (MQ=255)            ccagaaCCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCtt                                                                                                                                                   <  1:1371096/135‑1 (MQ=255)             cccAACCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAgg                                                                                                                                       >  2:1201165/1‑150 (MQ=255)             cccAACCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAgg                                                                                                                                       >  1:619994/1‑150 (MQ=255)              ccAACCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAggc                                                                                                                                      >  1:450170/1‑150 (MQ=255)               cAACCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAggcg                                                                                                                                     >  1:1197409/1‑150 (MQ=255)                aaCCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAggcgg                                                                                                                                    <  1:1201165/150‑1 (MQ=255)                    tGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCt                                                                                                                                >  2:1363057/1‑150 (MQ=255)                     gCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCtt                                                                                                                               >  2:526580/1‑150 (MQ=255)                      cTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTc                                                                                                                              <  2:1380706/150‑1 (MQ=255)                            cAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCac                                                                                                                        <  2:224790‑M2/150‑3 (MQ=255)                             aGCTCACTCGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTgcttgaagcgccgcctggcgctggcaagacc                                                                                                                       <  1:1236205‑M1/150‑32 (MQ=255)                                  aCTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTc                                                                                                                  <  2:456310/150‑1 (MQ=255)                                      gCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCa                                                                                                              <  2:1078548/150‑1 (MQ=255)                                        cAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACg                                                                                                            >  1:1359041/1‑150 (MQ=255)                                           ccGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGtt                                                                                                         >  1:315548/1‑150 (MQ=255)                                              ttCGGCCGCTTCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTc                                                                                                      <  1:1296732/150‑1 (MQ=255)                                              ttCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCAACACTTCGTCACGGttttg                                                                                                      >  2:560731/1‑149 (MQ=255)                                                  gCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCaga                                                                                                  <  1:224790/150‑1 (MQ=255)                                                     gCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCt                                                                                               >  1:661804/1‑150 (MQ=255)                                                       tGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTg                                                                                             <  2:1359041/150‑1 (MQ=255)                                                         cccGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGgc                                                                                           >  1:282689/1‑150 (MQ=255)                                                         cccGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGgc                                                                                           >  2:480218/1‑150 (MQ=255)                                                          ccGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCNGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGgcg                                                                                          <  1:560731/150‑1 (MQ=255)                                                          ccGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTc                                                                                                                              >  1:586396/1‑114 (MQ=255)                                                          ccGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTc                                                                                                                              <  2:586396/114‑1 (MQ=255)                                                            gcgcAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCa                                                                                        >  1:10871/1‑150 (MQ=255)                                                                  ccAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAgggcgg                                                                                  >  1:342088/1‑150 (MQ=255)                                                                  ccAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAgggcgg                                                                                  <  2:1197409/150‑1 (MQ=255)                                                                  ccAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAgggcgg                                                                                  <  2:619994/150‑1 (MQ=255)                                                                      gcgcCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCaa                                                                              >  2:1017906/1‑150 (MQ=255)                                                                       cgcCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAg                                                                             <  1:535611/150‑1 (MQ=255)                                                                          cGTGGCTTGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGgca                                                                          <  1:951815/150‑1 (MQ=255)                                                                              gCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCAt                                                                      >  2:190331/1‑150 (MQ=255)                                                                              gCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCAt                                                                      >  1:157707/1‑150 (MQ=255)                                                                               cTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATc                                                                     >  1:896048/1‑150 (MQ=255)                                                                                tCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGgca                                                                          >  1:597712/1‑144 (MQ=255)                                                                                tCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGgca                                                                          <  2:597712/144‑1 (MQ=255)                                                                                  gAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAAt                                                                  <  2:537875/150‑1 (MQ=255)                                                                                    gCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATgg                                                                <  2:896048/150‑1 (MQ=255)                                                                                    gCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATgg                                                                <  2:157707/150‑1 (MQ=255)                                                                                      aTTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGt                                                              <  1:1363057/150‑1 (MQ=255)                                                                                       ttAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTa                                                             >  2:463671/1‑150 (MQ=255)                                                                                         aGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAAt                                                           <  1:443647/150‑1 (MQ=255)                                                                                           gATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTgcttgaagcgccgcctggcgctggcaagaccaccc                                                                                                                   <  2:719022‑M1/92‑36 (MQ=255)                                                                                           gATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTgcttgaagcgccgcctggcgctggcaagaccaccc                                                                                                                   >  1:719022‑M1/1‑57 (MQ=255)                                                                                                tctGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGttt                                                                                                        <  1:283732/98‑1 (MQ=255)                                                                                                tctGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGttt                                                                                                        >  2:283732/1‑98 (MQ=255)                                                                                                tctGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAATGAAATCa                                                    >  1:1110501/1‑150 (MQ=255)                                                                                                  tGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAATGAAATCAtg                                                  <  1:480218/150‑1 (MQ=255)                                                                                                   gCCCGGCCAGCCACGGTTCGAGCAGCAGCGCCAGTGGCACGCGGGAGGTCTTGACAGCGTCAGGCGGCGCTTCAAGCACAACTTCGGCACGGTTTGCCAGAGCTCGGCGCAGGCGCGGCAGGGCAGCATCAATGGGGAATGGAATCGtgg                                                 >  2:177754/1‑150 (MQ=255)                                                                                                    cccGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATggg                                                               >  2:499538/1‑135 (MQ=255)                                                                                                    cccGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATggg                                                               <  1:499538/135‑1 (MQ=255)                                                                                                    cccGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAATGAAATCAtggt                                                <  1:371401/150‑1 (MQ=255)                                                                                                    cccGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAATGAAATCAtggt                                                <  2:282689/150‑1 (MQ=255)                                                                                                    cccGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAATGAAATCAtggt                                                <  2:443424/150‑1 (MQ=255)                                                                                                      cGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAATGAAATCAtggtgg                                              >  2:627400/1‑150 (MQ=255)                                                                                                             ccaCGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATCGGTAATGACCTCCTAGTGGTCCTccc                                       <  2:380472/150‑3 (MQ=255)                                                                                                               aCGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGCCGCGGTTTTCCAGAGCTTGGCGGAGGGGGGATCCCACCGCAGTGATTAGTAATGAAATCATGGTGGTCCTCGAGc                                     >  1:1385489/1‑150 (MQ=255)                                                                                                                cGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAATGAAATCATGGTGGTCCTCGAGCa                                    <  2:1110501/150‑1 (MQ=255)                                                                                                                   ttCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCa                                                                                                    <  1:1228401/83‑1 (MQ=255)                                                                                                                   ttCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCa                                                                                                    >  2:1228401/1‑83 (MQ=255)                                                                                                                        gcagcaGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAATGAAATCATGGTGGTCCACGAGCAGTCTcgcg                            >  1:222010/1‑150 (MQ=255)                                                                                                                          agcagcGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAATGAAATCATGGTGGTCCTCGAGCAGTCTCGCGAg                          <  1:1158665/150‑1 (MQ=255)                                                                                                                              gcgcCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAATGAAATCATGGTGGTCCTCGAGCAGTCTCGCGAGtata                      >  1:1216929/1‑150 (MQ=255)                                                                                                                                   aGTGGCACGCGGGTGGCCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGCGCGGGCAAGGCAGCATCAATGGGTAATGAAATCATGGTGGTCCTCGAGCAGTCTCGCGAGTATAACGGc                 <  2:342088/150‑1 (MQ=255)                                                                                                                                      ggCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAATGAAATCATGGTGGTCCTCGAGCAGTCTCGCGAGTATAACGGCGaa              <  2:10871/150‑1 (MQ=255)                                                                                                                                         aCGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGgca                                                                          >  2:377315/1‑87 (MQ=255)                                                                                                                                         aCGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGgca                                                                          <  1:377315/87‑1 (MQ=255)                                                                                                                                           gcgGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAATGAAATCATGGTGGTCCTCGAGCAGTCTCGCGAGTATAACGGCGAACCCAg         <  1:1003436/150‑1 (MQ=255)                                                                                                                                             gggTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCaccacccgcgtgccactggcgctgctgcacgaaccgtggctggccgggcagagcatc                                                                 >  1:719022‑M2/1‑35 (MQ=255)                                                                                                                                             gggTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCaccacccgcgtgccactggcgctgctgcacgaaccgtggctggccgggcagagcatc                                                                 <  2:719022‑M2/92‑58 (MQ=255)                                                                                                                                                 ggtCTTGCCAGCGCCAGGCGGCGCTTCAAGCaccacccgcgtgccactggcgctgctgcacgaaccgtggctggccgggcagagcatcctaatgctcgagccacggcgcctggctgcgcgggcagcggccgaacggctggcgagtgagct   <  1:1236205‑M2/150‑120 (MQ=255)                                                                                                                                                  gtgcttgaagcgccgcctggcgctggcaagaccacccgcgtgccactggcgctgctgcacgaaccgtggctggccgggcagagcatcctaatgctcgagccacggcgcctggctgcgcgggcagcggccgaacggctggccagtgagctg  <  2:224790‑M1/150‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                     ACCCACCGTTTCCCCAACCTGCTCGCCCAGCTCACTGGCCAGCCGTTCGGCCGCTGCCCGCGCAGCCAGGCGCCGTGGCTCGAGCATTAGGATGCTCTGCCCGGCCAGCCACGGTTCGTGCAGCAGCGCCAGTGGCACGCGGGTGGTCTTGCCAGCGCCAGGCGGCGCTTCAAGCACCACTTCGTCACGGTTTTCCAGAGCTTGGCGCAGGGCGGGCAAGGCAGCATCAATGGGTAATGAAATCATGGTGGTCCTCGAGCAGTCTCGCGAGTATAACGGCGAACCCAGCCTGCTC  >  NC_002947/5435066‑5435360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.