New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5577513 =	52 (0.990)	3 (0.060)	3/238	NT	5.4%	coding (1184/1536 nt)	PP_4906	hypothetical protein
	?	NC_002947	5577585 =	54 (1.060)					coding (1256/1536 nt)	PP_4906	hypothetical protein

GCCGAGAACTGGCTGTGGTTTTCCGGTGTGATGCGCAGCTGCCCGGCCTGACTCAGCAGCTTTTGCAGCAGCTTGTTCTGCGATACCTGCAGGGCCAGGGCACCGGCCTCTTTGGGCAGGCCGGCAATTTGCTGCACGCGCAGGTAGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5577663‑5577513 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAACCACAGCCAGTTCTCGGCGCTGTTGCCCGCCCCGCTGCGCACCTTGTTCCGCAGCGAACATGTACTACTTCGCTCGCTGGCAGCCAAC  >  NC_002947/5577585‑5577733                                                                                                                                                                                                                                                                                                              GCCGAGAACTGGCTGTGGTTTTCCGGTGTGATGCGCAGCTGCCCGGCCTGACTCAGCAGCTTTTGCAGCAGCTTGTTCTGCGATACCTGCAGGGCCAGGGCACCGGCCTCTTTGGGCAGGCCGGCAATTTGCTGCACGCGCAGGTAGTCG                                                                                                                                                        >  2:44065/1‑150                                                                       GCTTGTTCTGCGATACCTGCAGGGCCAGGGCACCGGCCTCTTTGGGCAGGCCGGCAATTTGCTGCACGCGCAGGTAGTCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAACCACAGCC                                                                                  >  2:1240648/1‑150                                                                         TTGTTCTGCGATACCTGCAGGGCCAGGGCACCGGCCTCTTTGGGCAGGCCGGCAATTTGCTGCACGCGCAGGTAGTCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCATGCCGGGCAGCTGCGCATCACACCGGAAAACCACAGCCAG                                                                                >  2:160073/1‑150                                                                                                            CTCTTTGGGCAGGCCGGCAATTTGCTGCACGCGCAGGTAGTCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAACCACAGCCAGTTCTCGGCGCTGTTGCCCGCCCCGCTGCGCACCTT                                             <  1:1240648/150‑1                                                                                                                                                      GCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAACCACAGCCAGTTCTCGGCGCTGTTGCCCGCCCCGCTGCGCACCTTGTTCCGCAGCGAACATGTACTACTTCGCTCGCTGGCAGCCAA   >  1:19764/1‑150                                                                                                                                                      GCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAACCACAGCCAGTTCTCGGCGCTATTGCCCGCCCCGCTGCGCACCTTGTTCCGCAGCGAACATGTACTACTTCGCTCGCTGGCAGCCAA   >  2:846697/1‑150                                                                                                                                                       CAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAACCACAGCCAGTTCTCGGCGCTGTTGCCCGCCCCGCTGCGCACCTTGTTCCGCAGCGAACATGTACTACTTCGCTCGCTGGCAGCCAAC  >  1:644864/1‑150                                                                                                                                                       CAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAACCACAGCCAGTTCTCGGCGCTGTTGCCCGCCCCGCTGCGCACCTTGTTCCGCAGCGAACATGTACTACTTCGCTCGCTGGCAGCCAAC  >  2:1279859/1‑150                                                                                                                                                       CAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAACCACAGCCAGTTCTCGGCGCTGTTGCCCGCCCCGCTGCGCACCTTGTTCCGCAGCGAACATGTACTACTTCGCTCGCTGGCAGCCAAC  <  2:915075/150‑1                                                                                                                                                                                                                                                                                                              GCCGAGAACTGGCTGTGGTTTTCCGGTGTGATGCGCAGCTGCCCGGCCTGACTCAGCAGCTTTTGCAGCAGCTTGTTCTGCGATACCTGCAGGGCCAGGGCACCGGCCTCTTTGGGCAGGCCGGCAATTTGCTGCACGCGCAGGTAGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5577663‑5577513 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAACCACAGCCAGTTCTCGGCGCTGTTGCCCGCCCCGCTGCGCACCTTGTTCCGCAGCGAACATGTACTACTTCGCTCGCTGGCAGCCAAC  >  NC_002947/5577585‑5577733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.