New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5577513 =	52 (0.990)	3 (0.060)	3/238	NT	5.4%	coding (1184/1536 nt)	PP_4906	hypothetical protein
	?	NC_002947	5577585 =	54 (1.060)					coding (1256/1536 nt)	PP_4906	hypothetical protein

CGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAACCACAGCCAGTTCTC  >  NC_002947/5577364‑5577660                                                                                                                                                      |                                                                                                                                                     gttggctgccagcgagcgaagtagtacatgttcgctgcggaacaaggtgcgcagcggggcgggcaacagcgccgagaactggctgtggttttccggtgtgatgcgcagctgcccggcctgactcagcagcttttgcagcagcttgttctg                                                                                                                                                      >  2:1279859‑M1/150‑150 (MQ=255) gttggctgccagcgagcgaagtagtacatgttcgctgcggaacaaggtgcgcagcggggcgggcaacagcgccgagaactggctgtggttttccggtgtgatgcgcagctgcccggcctgactcagcagcttttgcagcagcttgttctg                                                                                                                                                      >  1:644864‑M1/150‑150 (MQ=255) gttggctgccagcgagcgaagtagtacatgttcgctgcggaacaaggtgcgcagcggggcgggcaacagcgccgagaactggctgtggttttccggtgtgatgcgcagctgcccggcctgactcagcagcttttgcagcagcttgttctg                                                                                                                                                      <  2:915075‑M1/1‑1 (MQ=255)  ttggctgccagcgagcgaagtagtacatgttcgctgcggaacaaggtgcgcagcggggcgggcaatagcgccgagaactggctgtggttttccggtgtgatgcgcagctgcccggcctgactcagcagcttttgcagcagcttgttctGc                                                                                                                                                     >  2:846697‑M1/149‑150 (MQ=255)  ttggctgccagcgagcgaagtagtacatgttcgctgcggaacaaggtgcgcagcggggcgggcaacagcgccgagaactggctgtggttttccggtgtgatgcgcagctgcccggcctgactcagcagcttttgcagcagcttgttctGc                                                                                                                                                     >  1:19764‑M1/149‑150 (MQ=255)    ccTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGa                                                                                                                                                   <  2:1212629/150‑1 (MQ=255)      tGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACt                                                                                                                                                 >  2:779650/1‑150 (MQ=255)           cGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACCAGGCCAGCGACTACCTg                                                                                                                                            <  2:770447/150‑1 (MQ=255)              tGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTgcgc                                                                                                                                         >  2:755230/1‑150 (MQ=255)              tGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTgcgc                                                                                                                                         <  2:1251936/150‑1 (MQ=255)                    acaTTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTgc‑ag                                                                                                                                  >  1:117314/1‑150 (MQ=255)                             cAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGcc                                                                                                                         <  2:122638/150‑1 (MQ=255)                              aGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCg                                                                                                                        <  1:589765/150‑1 (MQ=255)                                  ccTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCt                                                                                                                    <  2:578660/150‑1 (MQ=255)                                   ctgccgGCCCAACCCAGCCCGTTCCCCACCGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCCTGCAACGCATCATGCTGCTTAGCCTGGCCCAGTCCAGCGACTACCTGCGCGTGC‑AGCAAATTGccacccag                                                                                                                   <  2:83789/150‑7 (MQ=255)                                      ctgGCCCAACCCACCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGccc                                                                                                                <  1:982996/150‑1 (MQ=255)                                         gCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCaaa                                                                                                             <  1:1052354/150‑1 (MQ=255)                                         gCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCaaa                                                                                                             >  1:57407/1‑150 (MQ=255)                                           ccAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAaga                                                                                                           >  2:202238/1‑150 (MQ=255)                                            aaggtgcgcagcggggcgggcaacagcgccgagaactggctgtggttttccggtgtgatgcgcagctgcccggcctgactcagcagcttttgcagcagcttgttctGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAagag                                                                                                          <  1:1240648‑M1/44‑1 (MQ=255)                                                ccAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCg                                                                                                      >  2:61155/1‑150 (MQ=255)                                                      cGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTgccc                                                                                                <  2:1304911/150‑1 (MQ=255)                                                       gTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTgccct                                                                                               >  2:993091/1‑150 (MQ=255)                                                         tCACCACCGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTgccctgg                                                                                             <  2:1073908/150‑1 (MQ=255)                                                             cAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTgccctggccct                                                                                         >  2:800035/1‑150 (MQ=255)                                                                cGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGCCAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCa                                                                                      <  2:1341971/150‑1 (MQ=255)                                                                cGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCa                                                                                      <  1:779650/150‑1 (MQ=255)                                                                     tGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGcc                                                                                                       <  1:1375575/128‑1 (MQ=255)                                                                     tGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGcc                                                                                                       >  2:1375575/1‑128 (MQ=255)                                                                         ccTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCa                                                                             <  2:751820/150‑1 (MQ=255)                                                                            ggCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAGGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGaa                                                                          >  2:618446/1‑150 (MQ=255)                                                                               ctggctgtggttttccggtgtgatgcgcagctgcccggcatgactcagcagcttttgcagcagcttgttctGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACaa                                                                       >  2:160073‑M1/72‑150 (MQ=255)                                                                                 ggctgtggttttccggtgtgatgcgcagctgcccggcctgactcagcagcttttgcagcagcttgttctGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAgc                                                                     >  2:1240648‑M1/70‑150 (MQ=255)                                                                                   cAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAgctg                                                                   <  1:202238/150‑1 (MQ=255)                                                                                    aGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAgctgc                                                                  <  1:77795/150‑1 (MQ=255)                                                                                     ggCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAGGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAgctgct                                                                 <  1:618446/150‑1 (MQ=255)                                                                                      gCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGctgctg                                                                <  1:484648/150‑1 (MQ=255)                                                                                      gCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCCAGTCAATG‑AATTGCGTGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGctgctg                                                                <  2:409841/150‑1 (MQ=255)                                                                                        ccAATAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAgctg                                                                   <  1:61116/145‑1 (MQ=255)                                                                                        ccAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAgctg                                                                   >  2:61116/1‑145 (MQ=255)                                                                                         cAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCGTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCaa                                                             >  2:283856/1‑150 (MQ=255)                                                                                         cAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCaa                                                             >  2:1362036/1‑150 (MQ=255)                                                                                         cAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCaa                                                             >  2:464630/1‑150 (MQ=255)                                                                                          aagaagCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTgc                                                                                                                                           <  2:706732/72‑1 (MQ=255)                                                                                          aagaagCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTgc                                                                                                                                           >  1:706732/1‑72 (MQ=255)                                                                                                 ccTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTCTCGCAGAACAAGCTGCTGCAAAAgctgct                                                     >  2:143850/1‑150 (MQ=255)                                                                                                 ccTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCCGCAGGTATCGCAGAACAAGCTGCTGCAAAAgctgct                                                     <  1:755230/150‑1 (MQ=255)                                                                                                          cTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGAGACCAGGTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGACCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGc                                            >  1:260492/1‑150 (MQ=255)                                                                                                                 aTGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAg                                     >  1:44065/1‑150 (MQ=255)                                                                                                                    cAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTg                                  >  1:606905/1‑150 (MQ=255)                                                                                                                        gCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCa                              <  2:1266813/150‑1 (MQ=255)                                                                                                                                    tCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGaaa                  >  1:187593/1‑150 (MQ=255)                                                                                                                                      aGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCgg                                         >  2:124579/1‑125 (MQ=255)                                                                                                                                      aGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCgg                                         <  1:124579/125‑1 (MQ=255)                                                                                                                                      aGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAAc                <  2:117314/150‑1 (MQ=255)                                                                                                                                      aGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAAc                <  1:993091/150‑1 (MQ=255)                                                                                                                                       gCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTTCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTgc                                 <  1:630140/132‑1 (MQ=255)                                                                                                                                       gCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTgc                                 >  2:630140/1‑132 (MQ=255)                                                                                                                                         cTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAGGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCGGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAACcac             <  1:1362036/150‑1 (MQ=255)                                                                                                                                          tGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCgg                                         >  2:366162/1‑121 (MQ=255)                                                                                                                                          tGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCgg                                         <  1:366162/121‑1 (MQ=255)                                                                                                                                                   ccAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCAt                             <  2:1015978/124‑1 (MQ=255)                                                                                                                                                   ccAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCAt                             >  1:1015978/1‑124 (MQ=255)                                                                                                                                                   ccAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGa                    <  1:908588/133‑1 (MQ=255)                                                                                                                                                   ccAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGa                    >  2:908588/1‑133 (MQ=255)                                                                                                                                                    cAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAACCACAGCCAGTtctc  >  2:294916/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGC‑AGCAAATTGCCGGCCTGCCCAAAGAGGCCGGTGCCCTGGCCCTGCAGGTATCGCAGAACAAGCTGCTGCAAAAGCTGCTGAGTCAGGCCGGGCAGCTGCGCATCACACCGGAAAACCACAGCCAGTTCTC  >  NC_002947/5577364‑5577660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.