| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5611532 | 72 (1.370) | 8 (0.160) | 7/240 | NT | 10.3% | coding (475/1176 nt) | PP_4931 | hypothetical protein |
| ? | NC_002947 | = 5611554 | 69 (1.350) | coding (497/1176 nt) | PP_4931 | hypothetical protein | |||||
CGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5611405‑5611532‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGCTCGGCCAGGTTGGCC‑AGCAGGCTCGGGACATCGACCACCAGTTCCGCCAGGCGGTACACCTTGCCCTTGAACGCGCGGTCCTGCAGTGCCGGTGGCAACTGGTCACCCTTGACCTGGTCGACCCGGCCGCGCACG < NC_002947/5611554‑5611417 CGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTTCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAGGTTGGCC‑AGCAG < 1:1069590/150‑1CGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCAGCTCGGCCAGGTTGGCC‑AGCA < 2:340895/150‑1 CCAGCAAGGCCGTGCGCGGCCGGTTCGCCCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGGGGAACTGGTGGTCGATGTCCCGAGCCAGCTCGGCCAGGTTGGCC‑AGCAGG < 1:106707/150‑1 TGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCAGCTCGGCCAGGTTGGCC‑AGCAGGCTCGG < 1:10462/95‑1 TGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCAGCTCGGCCAGGTTGGCC‑AGCAGGCTCGG > 2:10462/1‑95 GGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCAGCTCGGCCAGGTTGGCC‑AGCAGGCTCGG < 1:1115968/76‑1 GGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCAGCTCGGCCAGGTTGGCC‑AGCAGGCTCGG > 2:1115968/1‑76 ATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCTCGGGACATCGACCACCAGTTCCGCCAGGCGGTACACCTTGCCCTTGAACGCGCGGTCCTGCAGTGCCGGTGGCAACTGGTCACCCTTGACCTGGTCGACCCGGCCGCGCACG > 1:131689/1‑150 CGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5611405‑5611532‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGCTCGGCCAGGTTGGCC‑AGCAGGCTCGGGACATCGACCACCAGTTCCGCCAGGCGGTACACCTTGCCCTTGAACGCGCGGTCCTGCAGTGCCGGTGGCAACTGGTCACCCTTGACCTGGTCGACCCGGCCGCGCACG < NC_002947/5611554‑5611417 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |