New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5611532	72 (1.370)	8 (0.160)	7/240	NT	10.3%	coding (475/1176 nt)	PP_4931	hypothetical protein
	?	NC_002947	= 5611554	69 (1.350)					coding (497/1176 nt)	PP_4931	hypothetical protein

GGCAACCTCACAAGCTTCTTCGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCA  >  NC_002947/5611385‑5611682                                                                                                                                                    |                                                                                                                                                        ggCAACCTCACAAGCTTCTTCGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCctg                                                                                                                                                       >  2:90416/1‑150 (MQ=255) ggCAACCTCACAAGCTTCTTCGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCctg                                                                                                                                                       >  1:1086690/1‑150 (MQ=255)    aaCCTCACAAGCTTCTTCGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCctgct‑g                                                                                                                                                   <  1:265770/150‑1 (MQ=255)     aCCTCACAAGCTTCTTCGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑gg                                                                                                                                                  <  1:670696/150‑1 (MQ=255)      ccTCACAAGCTTCTTCGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGc                                                                                                                                                 >  2:292600/1‑150 (MQ=255)       cTCACAAGCTTCTTCGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGcc                                                                                                                                                >  1:1147767/1‑150 (MQ=255)        tCACAAGCTTCTTCGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCa                                                                                                                                               >  1:622069/1‑150 (MQ=255)             aGCTTCTTCGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTg                                                                                                                                          <  2:622069/150‑1 (MQ=255)                ttcttcGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑gg                                                                                                                                                  >  1:717963/1‑139 (MQ=255)                ttcttcGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑gg                                                                                                                                                  <  2:717963/139‑1 (MQ=255)                ttcttcGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGcc                                                                                                                                       <  1:90416/150‑1 (MQ=255)                  cttcGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGa                                                                                                                                     <  2:1086690/150‑1 (MQ=255)                   ttcGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAg                                                                                                                                    >  1:141212/1‑150 (MQ=255)                     cGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTTCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCtgctggccaggttggccagcag                                                                                                                                   <  1:1069590‑M1/150‑23 (MQ=255)                     cGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCagctcggccaggttggccagca                                                                                                                                   <  2:340895‑M1/150‑23 (MQ=255)                       ccAGCAAGGCCGTGCGCGGCCGGTTCGCCCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGGGGAACTGGTGGTCGATGTCCCGAGCCagctcggccaggttggccagcagg                                                                                                                                 <  1:106707‑M1/150‑25 (MQ=255)                             aGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCg                                                                                                                          >  1:1069411/1‑150 (MQ=255)                                 cGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCAGCTCGGCCAGGTTGGCC‑AGCAggctcgggacat                                                                                                                      >  1:131689‑M2/1‑138 (MQ=255)                                       gggCCGGGTCGACAGGGTCAAGGGTGACGAGTTGCAACGGGCACTGCAGGACCGCTCGTTCAAGGCCAAGGTGTACCGCCTGAGGGTACTGGTGTTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCTGAGCTGGCCGGCGAGTCCTTGCt                                                                                                                <  2:66535/149‑1 (MQ=255)                                              gTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGt                                                                                                         <  1:689717/150‑1 (MQ=255)                                                      ggTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCAt                                                                                                 <  2:638039/150‑1 (MQ=255)                                                       gTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCct                                                                                                                                                        <  1:1138614/95‑1 (MQ=255)                                                       gTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCct                                                                                                                                                        >  2:1140308/1‑95 (MQ=255)                                                       gTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCct                                                                                                                                                        >  2:1138614/1‑95 (MQ=255)                                                       gTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCct                                                                                                                                                        <  1:1140308/95‑1 (MQ=255)                                                       gTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATc                                                                                                >  1:783576/1‑150 (MQ=255)                                                          aaGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGaa                                                                                             >  1:450511/1‑150 (MQ=255)                                                          aaGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGaa                                                                                             >  2:66863/1‑150 (MQ=255)                                                          aaGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGaa                                                                                             >  1:307726/1‑150 (MQ=255)                                                           aGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAAc                                                                                            <  2:1330002/150‑1 (MQ=255)                                                             ggTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAAccc                                                                                          <  2:783576/150‑1 (MQ=255)                                                                 aCCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTGGc                                                                                      <  1:34719/150‑1 (MQ=255)                                                                   cAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTTTCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAAc                                                                                                                                             >  1:811963/1‑93 (MQ=255)                                                                   cAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAAc                                                                                                                                             <  2:811963/93‑1 (MQ=255)                                                                   cAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGt                                                                                    >  2:1005228/1‑150 (MQ=255)                                                                      ttGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGaa                                                                                 <  1:137724/150‑1 (MQ=255)                                                                       tGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAg                                                                                >  2:903028/1‑150 (MQ=255)                                                                           aCCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGGCAGCT‑TGGCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTaa                                                                            >  2:115352/1‑150 (MQ=255)                                                                            ccGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAAt                                                                           >  2:1234067/1‑150 (MQ=255)                                                                             cGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATg                                                                          <  2:752996/150‑1 (MQ=255)                                                                               gCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCg                                                                        >  2:446563/1‑150 (MQ=255)                                                                                 gcTGCAGGCCCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGCCCGGCGAGCCCTTGCTGGCAGGTGACCGCATCGAACCCTTGCGTGAAGGTAATGCGtt                                                                      >  2:171420/2‑150 (MQ=255)                                                                                   tGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCagctcggccaggttggccagcaggctcgg                                                                                                                            <  1:10462‑M1/95‑30 (MQ=255)                                                                                   tGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCagctcggccaggttggccagcaggctcgg                                                                                                                            >  2:10462‑M1/1‑66 (MQ=255)                                                                                   tGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTgg                                                                    >  1:136911/1‑150 (MQ=255)                                                                                    gCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGCACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGt                                                                   >  2:261636/1‑150 (MQ=255)                                                                                      aGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCg                                                                 <  2:599800/150‑1 (MQ=255)                                                                                      aGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCg                                                                 <  2:307726/150‑1 (MQ=255)                                                                                       ggACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTAGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCgg                                                                >  1:80972/1‑150 (MQ=255)                                                                                        gACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGc                                                               <  2:1223368/150‑1 (MQ=255)                                                                                        gACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGc                                                               <  1:66863/150‑1 (MQ=255)                                                                                                gTTCCAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGCAGGTTGGCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGt                                                       <  1:727691/150‑1 (MQ=255)                                                                                                  tCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTgg                                                     <  2:1147767/150‑1 (MQ=255)                                                                                                    aaGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGaa                                                                                             <  1:890517/108‑1 (MQ=255)                                                                                                    aaGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGaa                                                                                             >  2:890517/1‑108 (MQ=255)                                                                                                    aaGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACGCTTGCGTGAAGGTAATGAGTTGGTTGGCCTGCGTGTGgac                                                   >  1:707885/1‑150 (MQ=255)                                                                                                    aaGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGgac                                                   <  2:1349977/150‑1 (MQ=255)                                                                                                     aGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTg                                                                                                               >  2:1123553/1‑89 (MQ=255)                                                                                                     aGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTg                                                                                                               <  1:1123553/89‑1 (MQ=255)                                                                                                      gggCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCagctcggccaggttggccagcaggctcgg                                                                                                                            <  1:1115968‑M1/76‑30 (MQ=255)                                                                                                      gggCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCagctcggccaggttggccagcaggctcgg                                                                                                                            >  2:1115968‑M1/1‑47 (MQ=255)                                                                                                      gggCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGgacga                                                 >  1:521355/1‑150 (MQ=255)                                                                                                        gCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGTCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGAcc                                               >  2:1031936/1‑150 (MQ=255)                                                                                                        gCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAAccc                                                                                          <  1:795409/107‑1 (MQ=255)                                                                                                        gCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAAccc                                                                                          >  2:795409/1‑107 (MQ=255)                                                                                                          aaGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTg                                                      >  2:1123396/1‑141 (MQ=255)                                                                                                          aaGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTg                                                      <  1:1123396/141‑1 (MQ=255)                                                                                                                   cGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGt                                    <  2:450511/150‑1 (MQ=255)                                                                                                                   cGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGt                                    <  2:803990/150‑1 (MQ=255)                                                                                                                   cGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGt                                    <  2:80972/150‑1 (MQ=255)                                                                                                                    gCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGa                                                                                                                         <  1:486663/64‑1 (MQ=255)                                                                                                                    gCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGa                                                                                                                         >  2:486663/1‑64 (MQ=255)                                                                                                                     ccTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGc                                  >  2:421844/1‑150 (MQ=255)                                                                                                                         gCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGt                                                                                                         <  1:1323296/75‑1 (MQ=255)                                                                                                                         gCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGt                                                                                                         >  2:1323296/1‑75 (MQ=255)                                                                                                                           ggAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGc                                                                                      <  2:580644/92‑1 (MQ=255)                                                                                                                           ggAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGc                                                                                      >  1:580644/1‑92 (MQ=255)                                                                                                                           ggAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACg                            >  2:309487/1‑150 (MQ=255)                                                                                                                                tggtggTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCg                       >  2:40694/1‑150 (MQ=255)                                                                                                                                  gtggtCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTa                     >  1:1390028/1‑150 (MQ=255)                                                                                                                                    ggtCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTAtt                   <  1:446563/150‑1 (MQ=255)                                                                                                                                     gtCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCgg                                             <  2:84476/123‑1 (MQ=255)                                                                                                                                     gtCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCgg                                             >  1:84476/1‑123 (MQ=255)                                                                                                                                     gtCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTACTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTg                  >  2:871348/1‑150 (MQ=255)                                                                                                                                         cagttccGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAgcg              >  2:1251017/6‑150 (MQ=255)                                                                                                                                         aTGTCCCGAGCCtgctggccaacctggccgagctggctcgggacatcgaccaccagttccgccaggcggtacaccttgcccttgaacgcgcggtcctgcagtgccggtggcaactggtcacccttgacctggtcgacccggccgcgcacg               >  1:131689‑M1/1‑12 (MQ=255)                                                                                                                                           gTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCTAACGCATAGTATTGAGCGcc            <  2:141212/150‑1 (MQ=255)                                                                                                                                              ccGAGCCTGCT‑GGCCAACCTGGCCGAGCTggctcgggacatcgaccaccagttccgccaggcggtacaccttgcccttgaacgcgcggtcctgca                                                                >  2:10462‑M2/1‑29 (MQ=255)                                                                                                                                              ccGAGCCTGCT‑GGCCAACCTGGCCGAGCTggctcgggacatcgaccaccagttccgccaggcggtacaccttgcccttgaacgcgcggtcctgca                                                                <  1:10462‑M2/95‑67 (MQ=255)                                                                                                                                              ccGAGCCTGCT‑GGCCAACCTGGCCGAGCTggctcgggacatcgaccaccagttccgccaggcggtacaccttgccc                                                                                   <  1:1115968‑M2/76‑48 (MQ=255)                                                                                                                                              ccGAGCCTGCT‑GGCCAACCTGGCCGAGCTggctcgggacatcgaccaccagttccgccaggcggtacaccttgccc                                                                                   >  2:1115968‑M2/1‑29 (MQ=255)                                                                                                                                              ccGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGa         >  1:576384/1‑150 (MQ=255)                                                                                                                                                   ccTGCT‑GGCCAACCTGGCCGAGCTggctcgggacatcgaccaccagttcccccaggcggtacaccttgcccttgaacgcgcggtcctgcagtgccggtggcaactggtcacccttgacctgggcgaaccggccgcgcacggccttgctgg    <  1:106707‑M2/150‑127 (MQ=255)                                                                                                                                                    ctgct‑gGCCAACCTGGCC‑AGCAggctcgggacatcgaccaccagttccgccaggcggtacaccttgcccttgaacgcgcggtcctgcagtgccggtggaaactggtcacccttgacctggtcgacccggccgcgcacggccttgctggcg  <  1:1069590‑M2/150‑129 (MQ=255)                                                                                                                                                    |                                                                                                                                                        GGCAACCTCACAAGCTTCTTCGCCAGCAAGGCCGTGCGCGGCCGGGTCGACCAGGTCAAGGGTGACCAGTTGCCACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCT‑GGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGTCGGCCTGCGCGTGGACGACCGGGAAATCCGTGCCCAACGCATCGTATTGAGCGCCGGAGCCGGCA  >  NC_002947/5611385‑5611682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.