| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5621093 | 47 (0.890) | 5 (0.100) | 4/238 | NT | 10.4% | coding (222/774 nt) | PP_4939 | hypothetical protein |
| ? | NC_002947 | = 5621110 | 41 (0.810) | coding (205/774 nt) | PP_4939 | hypothetical protein | |||||
GATGTTGGGACTGACATCCAGGATGGCCTGCGAGTCTTCGACAAAGCCTTGGCGATAGAATTGCCAGTCGTCTTCGCAGTGAAAAATGTACGGCGTCTTGACCTGGCTGTAGGCCAGGTCGATAGACGGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5620961‑5621093‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacCGGCCCAAACTTGGCCAGTTGCCGTCTATCGACCTGGCCTACAGCCAGGTCAAGACGCCGTACATTTTTCACTGCGAAGACGACTGGCAATTCTATCGCCAAGGCTTTGTCGAAGACTCGCAGGCCATCCTGGATGTCAGTCCCAACAT < NC_002947/5621110‑5620962 GATGTTGGGACTGACATCCAGGATGGCCTGCGAGTCTTCGACAAAGCCTTGGCGATAGAATTGCCAGTCGTCTTCGCAGTGAAAAATGTACGGCGTCTTGACCTGGCTGTAGGCCAGGTCGATAGACGGCAA < 1:232577/132‑1GATGTTGGGACTGACATCCAGGATGGCCTGCGAGTCTTCGACAAAGCCTTGGCGATAGAATTGCCAGTCGTCTTCGCAGTGAAAAATGTACGGCGTCTTGACCTGGCTGTAGGCCAGGTCGATAGACGGCAA > 2:232577/1‑132 TGGGACTGACATCCAGGATGGCCTGCGAGTCTTCGACAAAGCCTTGGCGATAGAATTGCCAGTCGTCTTCGCAGTGAAAAATGTACGGCGTCTTGACCTGGCTGTAGGCCAGGTCGATAGACGGCAACCGGCCCAAACTTGGCCAGTTGC < 2:1103161/150‑1 TCGCAGTGAAAAATGTACGGCGTCTTGACCTGGCTGTAGGCCAGGTCGATAGACGGCAACCGGCCCAAACTTGGCCAGTTGCC < 1:584737/83‑1 TCGCAGTGAAAAATGTACGGCGTCTTGACCTGGCTGTAGGCCAGGTCGATAGACGGCAACCGGCCCAAACTTGGCCAGTTGCC > 2:584737/1‑83 GTGAAAAATGTACGGCGTCTTGACCTGGCTGTAGGCCAGGTCGATAGACGGCAACCGGCCCAAACTTGGCCAGTTGCC > 1:813857/1‑78 GTGAAAAATGTACGGCGTCTTGACCTGGCTGTAGGCCAGGTCGATAGACGGCAACCGGCCCAAACTTGGCCAGTTGCC < 2:813857/78‑1 CCGGCCCAAACTTGGCCAGTTGCCGTCTATCGACCTGGCCTACAGCCAGGTCAAGACGCCGTACATTTTTCACTGCGAAGACGACTGGCAATTCTATCGCCAAGGCTTTGTCGAAGACTCGCAGGCCATCCTGGATGTCAGTCCCAACAT > 2:490068/1‑150 CCGGCCCAAACTTGGCCAGTTGCCGTCTATCGACCTGGCCTACAGCCAGGTCAAGACGCCGTACATTTTTCACTGCGAAGACGACTGGCAATTCTATCGCCAAGGCTTTGTCGAAGACTCGCAGGCCATCCTG < 1:686293/133‑1 CCGGCCCAAACTTGGCCAGTTGCCGTCTATCGACCTGGCCTACAGCCAGGTCAAGACGCCGTACATTTTTCACTGCGAAGACGACTGGCAATTCTATCGCCAAGGCTTTGTCGAAGACTCGCAGGCCATCCTG > 2:686293/1‑133 GATGTTGGGACTGACATCCAGGATGGCCTGCGAGTCTTCGACAAAGCCTTGGCGATAGAATTGCCAGTCGTCTTCGCAGTGAAAAATGTACGGCGTCTTGACCTGGCTGTAGGCCAGGTCGATAGACGGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5620961‑5621093‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacCGGCCCAAACTTGGCCAGTTGCCGTCTATCGACCTGGCCTACAGCCAGGTCAAGACGCCGTACATTTTTCACTGCGAAGACGACTGGCAATTCTATCGCCAAGGCTTTGTCGAAGACTCGCAGGCCATCCTGGATGTCAGTCCCAACAT < NC_002947/5621110‑5620962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |