New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5647443	53 (1.010)	5 (0.100)	4/228	NT	7.6%	coding (196/738 nt)	PP_4955	hypothetical protein
	?	NC_002947	= 5647478	72 (1.480)					coding (161/738 nt)	PP_4955	hypothetical protein

TAAACGCCTCGCCCTTACGCTGCAGCAGGCGAATACGATTACTCAGGTAGGCGCTGGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5647287‑5647443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacggcacTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGGGCGCGTGCGTTGCTGGGGGTAGGTGAAGGGCGCTACGACGTGCTGATCAA  <  NC_002947/5647478‑5647385                                                                                                                                                                                                                                                             TAAACGCCTCGCCCTTACGCTGCAGCAGGCGAATACGATTACTCAGGTAGGCGCTGGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCC                                                                                                       >  2:510860/1‑150     CGCCTCGCCCTTACGCTGCAGCAGGCGAATACGATTACTCAGGTAGGCGCTGGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGG                                                                                                   <  2:122288/150‑1       CCTCGCCCTTACGCTGCAGCAGGCGAATACGATTACTCAGGTAGGCGCTCGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCA                                                                                                 >  2:199622/1‑150                            GGCGAATACGATTACGCAGGTAGGCGCTGGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGGATTGATCAGCACGTCGTAGCGCCCTATAACTACTCTCGGCAAGGCACGCGCCCAGGTCGTTGGCGCGTGCCGGCTACGCC                                                                            >  2:665493/1‑150                                                    CGCTGGAGAATTGCCCGATATTGGCGCGCCAGTCGTCGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAGCGCACGCGCCCACGGCACTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGG                                                    <  1:665493/150‑1                                                          AGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCACTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGGGCGCGT                                              <  1:199622/150‑1                                                                                                          GCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCACTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGG                                                    <  1:31780/96‑1                                                                                                          GCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCACTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGG                                                    >  2:31780/1‑96                                                                                                                                                            ACTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGGGCGCGTGCGTTGCTGGGGGTAGGTGAAGGGCGCTACGACGTGCTGATCAA  >  1:139678/1‑96                                                                                                                                                            ACTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGGGCGCGTGCGTTGCTGGGGGTAGGTGAAGGGCGCTACGACGTGCTGATCAA  <  2:139678/96‑1                                                                                                                                                                                                                                                             TAAACGCCTCGCCCTTACGCTGCAGCAGGCGAATACGATTACTCAGGTAGGCGCTGGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5647287‑5647443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacggcacTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGGGCGCGTGCGTTGCTGGGGGTAGGTGAAGGGCGCTACGACGTGCTGATCAA  <  NC_002947/5647478‑5647385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.