New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5775531 =	49 (0.930)	4 (0.080)	4/236	NT	8.2%	coding (1342/1473 nt)	betB	NAD‑dependent betaine aldehyde dehydrogenase
	?	NC_002947	5775547 =	42 (0.830)					coding (1358/1473 nt)	betB	NAD‑dependent betaine aldehyde dehydrogenase

GAAAACCGAGTTGTAGCCGCCCAGCTCGACCTGGACCGACTTGATGCGAGTGTATTGAGCCAGCGAGCTGACGCCGTTTTCACGGCCGACGCCCGACTGCTTGTAGCCACCTACCGGCATTTCGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5775659‑5775531 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggTAGGTGGCTACAAGCAGTCGGGCGTCGGC  >  NC_002947/5775547‑5775575                                                                                                                                                                GAAAACCGAGTTGTAGCCGCCCAGCTCGACCTGGACCGACTTGATGCGAGTGTATTGAGCCAGCGAGCTGACGCCGTTTTCACGGCCGACGCCCGACTGCTTGTAGCCACCTACCGGCCGAAATGCCGGTAGGTGGCTACAAGCAGTC            >  1:1341024/1‑148 GAAAACCGAGTTGTAGCCGCCCAGCTCGACCTGGACCGACTTGATGCGAGTGTATTGAGCCAGCGAGCTGACGCCGTTTTCACGGCCGACGCCCGACTGCTTGTAGCCACCTACCGGCCGAAATGCCGGTAGGTGGCTACAAGCAGTC            <  2:1341024/148‑1                                                                                                               CTACCGGCATTTCGGCCGGTAGGTGGCTACAAGCAGTCGGGCGTCGGC  <  1:415325/48‑1                                                                                                               CTACCGGCATTTCGGCCGGTAGGTGGCTACAAGCAGTCGGGCGTCGGC  >  2:415325/1‑48                                                                                                                                                                GAAAACCGAGTTGTAGCCGCCCAGCTCGACCTGGACCGACTTGATGCGAGTGTATTGAGCCAGCGAGCTGACGCCGTTTTCACGGCCGACGCCCGACTGCTTGTAGCCACCTACCGGCATTTCGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5775659‑5775531 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggTAGGTGGCTACAAGCAGTCGGGCGTCGGC  >  NC_002947/5775547‑5775575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.