| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6027969 | 40 (0.760) | 10 (0.230) | 8/204 | NT | 21.3% | intergenic (‑57/+54) | PP_5277/kauB | MFS transporter/4‑guanidinobutyraldehyde dehydrogenase |
| ? | NC_002947 | = 6027984 | 41 (0.940) | intergenic (‑72/+39) | PP_5277/kauB | MFS transporter/4‑guanidinobutyraldehyde dehydrogenase | |||||
GCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6027802‑6027969‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcaagcccgctcctgcaGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCAAATGGGCCCCTGGAAATATTGGCTGGGAGGCTGTAATGCGTTGGGGTACCTACTTCGCCGTACTGGCATCGGTGCTCAGTGTCGGGCTGGCGCTTGGCGTGAGCATGC < NC_002947/6027984‑6027840 GCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCG < 1:1136474/150‑1GCCGAAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCG < 1:280554/150‑1 CCGTAGCGTCAGGCCTCCAGGCGCAGGGACGCCAGCGGTATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGG < 2:82766/150‑1 CCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCC < 2:1024975/150‑1 CCAGTCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCC > 1:1051725/1‑150 GCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCGCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTC > 2:870597/1‑150 CCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCC > 2:1086688/1‑150 TCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTG < 1:1086688/150‑1 TCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTG > 2:818082/1‑150 CAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATAACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCA > 2:1108496/1‑150 GCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGC < 1:754244/150‑1 GCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGC < 1:818082/150‑1 ACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCC > 1:346113/1‑113 ACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCC < 2:346113/113‑1 CGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGG > 1:105796/1‑89 CGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGG < 2:105796/89‑1 ACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGG < 2:1419007/123‑1 ACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGG > 1:1419007/1‑123 CCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGC < 2:1218418/112‑1 CCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGC > 1:1218418/1‑112 GCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTT < 2:236521/96‑1 GCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTT > 1:236521/1‑96 CAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGG > 2:1408470/1‑74 CAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGG < 1:1408470/74‑1 GGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCAAATGGGCCCCTGGAAATATTGGCTGGGAGGCTGTAATGCGTTGGGGTACCTACTTCGCCGTACTGGCATCGGTGCTCAGTGTCGGGCTGGCGCTT > 1:215094/1‑150 CAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCAAATGGGCCCCTGGAAATATTGGCTGGGAGGCTGTAATGCGTTGGGGTACC < 1:1415608/103‑1 CAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCAAATGGGCCCCTGGAAATATTGGCTGGGAGGCTGTAATGCGTTGGGGTACC > 2:1415608/1‑103 GCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCAAATGGGCCCCTGGAAATATTGGCTGGGAGGCTGTAATGCGTTGGGGTACCTACTTCGCCGTACTGGCATCGGTGCTCAGTGTCGGGCTGGCGCTTGGCGT > 1:660606/1‑150 GCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCAAATGGGCCCCTGGAAATATTGGCTGGGAGGCTGTAATGCGTTGGGGTACCTACTTCGCCGTACTGGCATCGGTGCTCAGTGTCGG > 2:722873/1‑131 GCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCAAATGGGCCCCTGGAAATATTGGCTGGGAGGCTGTAATGCGTTGGGGTACCTACTTCGCCGTACTGGCATCGGTGCTCAGTGTCGG < 1:722873/131‑1 CTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCAAATGGGCCCCTGGAAATATTGGCTGGGAGGCTGTAATGCGTTGGGGTACCTACTTTGCCGTACTTGCATCGGTGCTCAGTGTCGGTCTGGCGCTTGGCGTGAGCATGC > 1:571204/1‑150 GCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6027802‑6027969‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcaagcccgctcctgcaGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCAAATGGGCCCCTGGAAATATTGGCTGGGAGGCTGTAATGCGTTGGGGTACCTACTTCGCCGTACTGGCATCGGTGCTCAGTGTCGGGCTGGCGCTTGGCGTGAGCATGC < NC_002947/6027984‑6027840 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |