New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 611517947 (0.890)4 (0.080) 4/224 NT 8.6% coding (564/1287 nt) PP_5365 fatty acid methyltransferase
?NC_002947 = 6115207 42 (0.880)coding (536/1287 nt) PP_5365 fatty acid methyltransferase

AAGCCCTTCCGCTTGCACACGCTTGCGGCCGAGCTTCAATTGCTCCTTGCTCAGGGTAATGCCGAACACCTTGGCGCCATATTCACGGGCAGCGAACCGCGCCAGCCCGCCCCAGCCACAGCCAACATCGAGCAGGTAGTCACCGGCATCCAGGCGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6115020‑6115179
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcgcagcAGGACAAGTTCGACCACCTGTGCCGCAAGCTGCGCCTGGATGCCGGTGACTACCTGCTCGATGTTGGCTGTGGCTGGGGCGGGCTGGCGCGGTTCGCTGCCCGTGAATATGGCGCCAAGGTGTTCGGCATTACCCTGAGCAAGGAG  <  NC_002947/6115207‑6115062
                                                                                                                                                                                                                                                                                                                  
AAGCCCTTCCGCTTGCACACGCTTGCGGCCGAGCTTCAATTGCTCCTTGCTCAGGGTAATGCCGAACACCTTGGCGCCATATTCACGGGCAGCGAACCGCGCCAGCCCGCCCCAGCCACAGCCAACATCGAGCAGGTAGTCACCGGCATC                                                                                                                                                              >  2:897584/1‑150
  GCCCTTCCGCTTGCACACGCTTGCGGCCGAGCTTCAATTGCTCCTTGNTCAGGGTAATGCCGAACACCTTGGCGCCATATTCACGGGCAGCGCACCGCGCCAGCCCGCCCCAGCCACAGCCAACATCGAGCAGGTAGTCACCGGCATCCA                                                                                                                                                            >  1:520959/1‑150
                                                        TAATGCCGAACACCTTGGCGCCATATTCACGGGCAGCGAACCGCGCCAGCCCGCCCCAGCCACAGCCAACATCGAGCAGGTAGTCACCGGCATCCAG                                                                                                                                                           <  1:144919/97‑1
                                                        TAATGCCGAACACCTTGGCGCCATATTCACGGGCAGCGAACCGCGCCAGCCCGCCCCAGCCACAGCCAACATCGAGCAGGTAGTCACCGGCATCCAG                                                                                                                                                           >  2:144919/1‑97
                                                                                 TTCACGGGCAGCGAACCGCGCCAGCCCGCCCCAGCCACAGCCAACATCGAGCAGGTAGTCACCGGCATCCAGGCGCAGCAGGACAAGTTCGACCACCTGTGCCGCAAGCTGCGC                                                                                                                 >  1:619447/1‑114
                                                                                 TTCACGGGCAGCGAACCGCGCCAGCCCGCCCCAGCCACAGCCAACATCGAGCAGGTAGTCACCGGCATCCAGGCGCAGCAGGACAAGTTCGACCACCTGTGCCGCAAGCTGCGC                                                                                                                 <  2:619447/114‑1
                                                                                                 CGCGCCAGCCCGCCCCAGCCACAGCCAACATCGAGCAGGTAGTCACCGGCATCCAGGCGCAGCAGGACAAGTTCGACCACCTGTGCCGCAAGCTGCGCCTGGAT                                                                                                           >  1:69162/1‑104
                                                                                                 CGCGCCAGCCCGCCCCAGCCACAGCCAACATCGAGCAGGTAGTCACCGGCATCCAGGCGCAGCAGGACAAGTTCGACCACCTGTGCCGCAAGCTGCGCCTGGAT                                                                                                           <  2:69162/104‑1
                                                                                                                                                     CCAGGCGCAGCAGGACAAGTTCGACCACCTGTGCCGCAAGCTGCGCCTGGATGCCGGTGACTACCTGCTCGATGTTGGCTGTGGCTGGGGCGGGCTGGCGCGGTTCGCTGCCCGTGAATATGGCGCCAAGGTGTTCGGCATTACCCTGAG         <  2:315450/150‑1
                                                                                                                                                            CAGCAGGACAAGTTCGACCACCTGTGCCGCAAGCTGCGCCGGGATGCCGGTTACTACCTGCTCGATGTTGGCTGTGGCTGGGGCGGGCTGGCGCGGTTCGCTGCCCGTGAATATGGCGCCAAGGTGTTCGGCATTACCCTGAGCAAGGAG  <  2:6258/150‑1
                                                                                                                                                                                                                                                                                                                  
AAGCCCTTCCGCTTGCACACGCTTGCGGCCGAGCTTCAATTGCTCCTTGCTCAGGGTAATGCCGAACACCTTGGCGCCATATTCACGGGCAGCGAACCGCGCCAGCCCGCCCCAGCCACAGCCAACATCGAGCAGGTAGTCACCGGCATCCAGGCGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6115020‑6115179
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcgcagcAGGACAAGTTCGACCACCTGTGCCGCAAGCTGCGCCTGGATGCCGGTGACTACCTGCTCGATGTTGGCTGTGGCTGGGGCGGGCTGGCGCGGTTCGCTGCCCGTGAATATGGCGCCAAGGTGTTCGGCATTACCCTGAGCAAGGAG  <  NC_002947/6115207‑6115062

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.