| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6175253 = | 61 (1.160) | 10 (0.200) | 9/232 | NT | 15.4% | intergenic (‑21/+23) | atpC/atpD | ATP synthase subunit epsilon/ATP synthase subunit beta |
| ? | NC_002947 | 6175271 = | 52 (1.050) | intergenic (‑39/+5) | atpC/atpD | ATP synthase subunit epsilon/ATP synthase subunit beta | |||||
GTACGTTTCCCTGAAAGACACCATCGCTGGCTTCAGCGGCATCCTCAAAGGTGACTACGACCACCTGCCAGAACAAGCGTTCTACATGGTCGGCAGCATCGACGAAGCGATCGAGAAAGCCAAGAAACTGTAATTCCTGCGCCCCGCAAGGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6175408‑6175253‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggcgcAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAACGTACTTGCCT > NC_002947/6175271‑6175414 GTACGTTTCCCTGAAAGACACCATCGCTGGCTTCAGCGGCATCCTCAAAGGTGACTACGACCACCTGCCAGAACAAGCGTTCTACATGGTCGGCAGCATGGACGAAGCGATCGAGAAAGCCAAGAAACTGTAATTCCTGCGCCCCGCAAG < 1:747566/150‑1 TACGACCACCTGCCAGAACAAGCGTTCTACATGGTCGGCAGCATCGACGAAGCGATCGAGAAAGCCAAGAAACTGTAATTCCTGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCT > 2:604567/1‑126 TACGACCACCTGCCAGAACAAGCGTTCTACATGGTCGGCAGCATCGACGAAGCGATCGAGAAAGCCAAGAAACTGTAATTCCTGCGCCCCGTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCT < 1:604567/126‑1 CTGCGCCCCGCAAGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGC > 1:382950/1‑66 CTGCGCCCCGCAAGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGC < 2:382950/66‑1 CTGCGCCCCGCAAGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTC > 1:755271/1‑58 CTGCGCCCCGCAAGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTC < 2:755271/58‑1 GCGCCCCGCAAGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAA > 1:1116796/1‑150 GCCCCGCAAGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAAC > 2:186623/1‑150 CCGCAAGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAACGTA < 1:186623/150‑1 CCGCAAGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCCTTCAGGGAAACGTA > 1:1254302/1‑150 CGCAAGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAACGTAC < 2:1116796/150‑1 GGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAACGTACTTGCCT < 1:1215228/150‑1 GTACGTTTCCCTGAAAGACACCATCGCTGGCTTCAGCGGCATCCTCAAAGGTGACTACGACCACCTGCCAGAACAAGCGTTCTACATGGTCGGCAGCATCGACGAAGCGATCGAGAAAGCCAAGAAACTGTAATTCCTGCGCCCCGCAAGGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6175408‑6175253‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggcgcAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAACGTACTTGCCT > NC_002947/6175271‑6175414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |