New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6175253 =61 (1.160)10 (0.200) 9/232 NT 15.4% intergenic (‑21/+23) atpC/atpD ATP synthase subunit epsilon/ATP synthase subunit beta
?NC_002947 6175271 = 52 (1.050)intergenic (‑39/+5) atpC/atpD ATP synthase subunit epsilon/ATP synthase subunit beta

TGGAGCGATACCAAGATCACCCAGGTTACCGTGCGCAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAACGTACTTGCCTGGCGAA  >  NC_002947/6175122‑6175420
                                                                                                                                                     |                                                                                                                                                     
tGGAGCGATACCAAGATCACCCAGGTTACCGTGCGCAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCa                                                                                                                                                       <  1:730410/150‑1 (MQ=255)
 ggAGCGATACCAATATCACCCATTTTACCGTTCTCAATCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCTCGCTGACGATATCGCAATGGACTGTCATAGCCATCTTCTTGCCTCAACCTGATAGCGCCCCTTTCGGGGCGCAg                                                                                                                                                      <  2:1002471/150‑1 (MQ=255)
      gATACCAAGATCACCCAGGTTACCGTGCGCAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAAtt                                                                                                                                                 >  2:406613/1‑150 (MQ=255)
      gATACCAAGATCACCCAGGTTACCGTGCGCAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAAtt                                                                                                                                                 >  2:698818/1‑150 (MQ=255)
        tACCAAGATCACCCAGGTTACCGTGCGCAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTAc                                                                                                                                               >  2:79103/1‑150 (MQ=255)
         aCCACGATCACCCAGGTTACCGTGCGCAACCACCATCGCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACa                                                                                                                                              >  2:448492/1‑150 (MQ=255)
                 ctgccAGGTCACCTTGCGCAACCACCATCTCGACCAGGCCGGAGAAGAGCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTg                                                                                                                                      <  2:365771/147‑1 (MQ=255)
                 cACCCAGGTTACCGTGCGCAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTg                                                                                                                                      <  1:79103/150‑1 (MQ=255)
                   ccctgtttACCTTGCGCAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGc                                                                                                                                    <  2:865169/144‑1 (MQ=255)
                   cccAGGTTACCGTGCGCAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGc                                                                                                                                    >  2:717865/1‑150 (MQ=255)
                      aGGTTACCGTGCGCAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCttt                                                                                                                                 <  1:1290041/150‑1 (MQ=255)
                         ttACCGTGCGCAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTtctc                                                                                                                              <  2:685608/150‑1 (MQ=255)
                            ccGTGCGCAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGAt                                                                                                                           <  1:1229510/150‑1 (MQ=255)
                                 cgcAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCtt                                                                                                                      <  1:1012835/150‑1 (MQ=255)
                                  gcAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCtt                                                                                                                                       >  2:1111901/1‑132 (MQ=255)
                                  gcAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCtt                                                                                                                                       <  1:1111901/132‑1 (MQ=255)
                                  gcAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTtc                                                                                                                     >  2:220193/1‑150 (MQ=255)
                                       caccaTCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTtcgtcgt                                                                                                                >  2:1278187/1‑149 (MQ=255)
                                       caccaTCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGa                                                                                                                <  1:698818/150‑1 (MQ=255)
                                        accaTCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGCCTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGAt                                                                                                               <  1:1086606/150‑1 (MQ=255)
                                        accaTCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGAt                                                                                                               >  1:1042554/1‑150 (MQ=255)
                                             ctcGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGAtgctgc                                                                                                          <  1:717865/150‑1 (MQ=255)
                                              tcGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTTTCATTGCCATCTGCTTGCCTCAACCTGATAGAGCCCCTTGCGGGGCGCAGGAAGTACAGGTGCTGGTGTATCTTGCTCGTTTCGTCGTtgataat                                                                                                         >  2:590109/1‑145 (MQ=255)
                                                tacgaccacctgccagaacaagcgttctacatggtcggcagcatcgacgaagcgatcgagaaagccaagaaactgtaattcctgcgccccttgcggggcgcAGGAATTACAGTTTCTTGGCTTtct                                                                                                                               >  2:604567‑M2/102‑126 (MQ=255)
                                                tacgaccacctgccagaacaagcgttctacatggtcggcagcatcgacgaagcgatcgagaaagccaagaaactgtaattcctgcgccccgtgcggggcgcAGGAATTACAGTTTCTTGGCTTtct                                                                                                                               <  1:604567‑M2/25‑1 (MQ=255)
                                                            gaagaTCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACg                                                                                           >  1:1258034/1‑150 (MQ=255)
                                                               gaTCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCtt                                                                                        <  1:332575/150‑1 (MQ=255)
                                                                        ttCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAAc                                                                                            >  2:1211698/1‑137 (MQ=255)
                                                                        ttCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAAc                                                                                            <  1:1211698/137‑1 (MQ=255)
                                                                        ttCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCa                                                                               >  2:1215228/1‑150 (MQ=255)
                                                                               cTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCACCCTCACTGCTCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTc                                                                        <  1:448492/150‑1 (MQ=255)
                                                                                     gcagcatcgacgaagcgatcgagaaagccaagaaactgtaattcctGCGCCCCTTGCGGGGCGCAg                                                                                                                                                      >  1:382950‑M1/47‑66 (MQ=255)
                                                                                     gcagcatcgacgaagcgatcgagaaagccaagaaactgtaattcctGCGCCCCTTGCGGGGCGCAg                                                                                                                                                      <  2:382950‑M1/20‑1 (MQ=255)
                                                                                      tatCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCa                                                                 >  1:139054/1‑150 (MQ=255)
                                                                                            aaTGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTg                                                           <  1:406613/150‑1 (MQ=255)
                                                                                             gacgaagcgatcgagaaagccaagaaactgtaattcctGCGCCCCTTGCGGGGCGCAg                                                                                                                                                      >  1:755271‑M1/39‑58 (MQ=255)
                                                                                             gacgaagcgatcgagaaagccaagaaactgtaattcctGCGCCCCTTGCGGGGCGCAg                                                                                                                                                      <  2:755271‑M1/20‑1 (MQ=255)
                                                                                                   tGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGc                                                    >  1:8840/1‑150 (MQ=255)
                                                                                                   tGTCATAGCCATCTACTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGc                                                    >  1:1272823/1‑150 (MQ=255)
                                                                                                     tCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGa                                                          >  1:11055/1‑142 (MQ=255)
                                                                                                     tCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGa                                                          <  2:11055/142‑1 (MQ=255)
                                                                                                       aTAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCt                                                <  1:220193/150‑1 (MQ=255)
                                                                                                          agaaagccaagaaactgtaattcctGCGCCCCGCACGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTa                                                                     <  1:604567‑M1/101‑1 (MQ=255)
                                                                                                          agaaagccaagaaactgtaattcctGCGCCCCGCAAGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTa                                                                     >  2:604567‑M1/26‑126 (MQ=255)
                                                                                                            cATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCa                                                                                                    >  1:1370496/1‑93 (MQ=255)
                                                                                                            cATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCa                                                                                                    <  2:1370496/93‑1 (MQ=255)
                                                                                                               cTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAg                                        <  2:784390/150‑1 (MQ=255)
                                                                                                               cTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTCTGACTTTGTCGCTGaattcag                                        <  2:1156541/150‑6 (MQ=255)
                                                                                                                   ttGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGAt                                    <  2:139054/150‑1 (MQ=255)
                                                                                                                   ttGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGAt                                    >  2:1245210/1‑150 (MQ=255)
                                                                                                                    tGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATg                                   <  2:8840/150‑1 (MQ=255)
                                                                                                                       cTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTa                                                                     <  1:1019909/113‑1 (MQ=255)
                                                                                                                       cTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTa                                                                     >  2:1019909/1‑113 (MQ=255)
                                                                                                                       cTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGaa                                             >  1:517028/1‑137 (MQ=255)
                                                                                                                       cTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGaa                                             <  2:517028/137‑1 (MQ=255)
                                                                                                                       cTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGc                                       <  2:383745/143‑1 (MQ=255)
                                                                                                                       cTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGc                                       >  1:383745/1‑143 (MQ=255)
                                                                                                                       cTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTAGGCTGACTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGgtg                                >  1:1105484/1‑150 (MQ=255)
                                                                                                                        tCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGgtgt                               >  2:1099520/1‑150 (MQ=255)
                                                                                                                           aCCTGCTAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGTATGCCGCTGAAGCCAGCGATGGTGTCtt                            <  1:590109/150‑1 (MQ=255)
                                                                                                                            ccTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCt                                                                                   >  2:420175/1‑94 (MQ=255)
                                                                                                                            ccTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCt                                                                                   <  1:420175/94‑1 (MQ=255)
                                                                                                                                 ctgcgccccgcaaggggcgcAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTtcgtc                                                                                                                  >  1:755271‑M2/21‑58 (MQ=255)
                                                                                                                                 ctgcgccccgcaaggggcgcAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTtcgtc                                                                                                                  <  2:755271‑M2/38‑1 (MQ=255)
                                                                                                                                 ctgcgccccgcaaggggcgcAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGAtgctgc                                                                                                          <  2:382950‑M2/46‑1 (MQ=255)
                                                                                                                                 ctgcgccccgcaaggggcgcAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGAtgctgc                                                                                                          >  1:382950‑M2/21‑66 (MQ=255)
                                                                                                                                   gcgccccgcaaggggcgcAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGaa                    >  1:1116796‑M2/19‑150 (MQ=255)
                                                                                                                                     gccccgcaaggggcgcAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAAc                  >  2:186623‑M2/17‑150 (MQ=255)
                                                                                                                                        ccgcaaggggcgcAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAACGTa               <  1:186623‑M2/137‑1 (MQ=255)
                                                                                                                                        ccgcaaggggcgcAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCCTTCAGGGAAACGTa               >  1:1254302‑M2/14‑150 (MQ=255)
                                                                                                                                         cgcaaggggcgcAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAACGTAc              <  2:1116796‑M2/138‑1 (MQ=255)
                                                                                                                                         CTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCCATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAACGTAc              <  1:747566‑M1/150‑1 (MQ=255)
                                                                                                                                               gggcgcAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAACGTACTTGCCt        <  1:1215228‑M2/144‑1 (MQ=255)
                                                                                                                                                     aGGAATTACAGTGTCGTTTCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAACGTACTTGCCTGGCGaa  <  2:747566/150‑1 (MQ=255)
                                                                                                                                                     aGGAAGTACAGTTTCGTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAACGTACTTGCCTGGCGaa  >  2:1124969/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TGGAGCGATACCAAGATCACCCAGGTTACCGTGCGCAACCACCATCTCGACCAGGCCGGAGAAGATCTCTCCTTCCGCGCTGACGATATCGCAATGGACTGTCATAGCCATCTGCTTGCCTCAACCTGATAGCGCCCCTTGCGGGGCGCAGGAATTACAGTTTCTTGGCTTTCTCGATCGCTTCGTCGATGCTGCCGACCATGTAGAACGCTTGTTCTGGCAGGTGGTCGTAGTCACCTTTGAGGATGCCGCTGAAGCCAGCGATGGTGTCTTTCAGGGAAACGTACTTGCCTGGCGAA  >  NC_002947/6175122‑6175420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.