New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 160985	37 (0.700)	4 (0.080)	4/232	NT	10.0%	coding (51/294 nt)	PP_0151	hypothetical protein
	?	NC_002947	= 160992	37 (0.750)					coding (44/294 nt)	PP_0151	hypothetical protein

GCGGGCCTGTGTAAGCAGTTTGCGATCGAATGGTGCGACTGTGACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATC  >  NC_002947/160883‑161126                                                                                                        |                                                                                                                                              gcgGGCCTGTGTAAGCAGTTTGCGATCGAATGGTGCGACTGTGACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATATCg                                                                                                <  2:1311409/150‑1 (MQ=255)      ccTGTGTAAGCAGTTTGCGATCGAATGGTGCGACTGTGACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGa                                                                                           <  2:1233077/150‑1 (MQ=255)      ccTGTGTAAGCAGTTTGCGATCGAATGGTGCGACTGTGACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGa                                                                                           <  2:864138/150‑1 (MQ=255)       cTGTGTAAGCAGTTTGCGATCGAATGGTGCGACTGTGACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCGTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAg                                                                                          >  1:1369770/1‑150 (MQ=255)        tgtgTAAGCAGTTTGCGATCGAATGGTGCGACTGTGACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGc                                                                                         >  1:626787/1‑150 (MQ=255)          tgtAAGCAGTTTGCGATCGAATGGTGCGACTGTGACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCtt                                                                                       >  1:328277/1‑150 (MQ=255)                 aGTTTGCGATCGAATGGTGCGACTGTGACCTGGCTGGAGAGATCCGTGGGTG‑TCTGGAGTTTTGGTGTGTTGGTCTCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGaa                                                                                <  1:319861/150‑1 (MQ=255)                     tGCGATCGAATGGTGCGACTGTGACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCt                                                                            >  2:920918/1‑150 (MQ=255)                      gcgcTCGCATCGAGCCACTTTCACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTg                                                                           <  2:1105172/150‑1 (MQ=255)                        gATCGAATGGTGCGACTGTGACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGaa                                                                                                                     >  1:367893/1‑106 (MQ=255)                        gATCGAATGGTGCGACTGTGACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGaa                                                                                                                     <  2:367893/106‑1 (MQ=255)                        gATCGAATGGTGCGACTGTGACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGa                                                                         >  1:638275/1‑150 (MQ=255)                                ggTGCGACTGTGACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGaa                                                                 <  2:626787/150‑1 (MQ=255)                                        tgtgACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAg                                                         >  1:265292/1‑150 (MQ=255)                                            aCCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTa                                                     <  1:754064/150‑1 (MQ=255)                                             ccTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTAc                                                    <  2:782557/150‑1 (MQ=255)                                              ctggctggTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGccagcgcccatgccatgga                                                                                                                            <  1:567790‑M1/77‑20 (MQ=255)                                              ctggctggTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGccagcgcccatgccatgga                                                                                                                            >  2:567790‑M1/1‑58 (MQ=255)                                              ctggctggTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGGGGCGGTTAACTCTGGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTAcc                                                   >  2:1106974/1‑150 (MQ=255)                                              ctggctggTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTAcc                                                   <  2:127131/150‑1 (MQ=255)                                              ctggctggTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTAcc                                                   <  2:265292/150‑1 (MQ=255)                                              ctggctggTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTAcc                                                   >  1:940017/1‑150 (MQ=255)                                              ctggctggTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTAcc                                                   >  1:127131/1‑150 (MQ=255)                                                     gTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGccagcgcccatgc                                                                                                                                  >  2:1097781‑M1/1‑51 (MQ=255)                                                     gTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGccagcgcccatgc                                                                                                                                  <  1:1097781‑M1/64‑14 (MQ=255)                                                        aCAT‑AGTCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGa                                         >  2:1103289/1‑150 (MQ=255)                                                                 ggTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGaa                                 <  1:1103289/150‑1 (MQ=255)                                                                       gACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAAc                           <  1:1045710‑M2/150‑2 (MQ=255)                                                                           aGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAAt                                                                    <  2:478137/105‑1 (MQ=255)                                                                           aGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAAt                                                                    >  1:478137/1‑105 (MQ=255)                                                                             gCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGaa                                                          <  1:631023/113‑1 (MQ=255)                                                                             gCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGaa                                                          >  2:631023/1‑113 (MQ=255)                                                                             gCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAAcgcacct                     <  2:1138798‑M2/150‑8 (MQ=255)                                                                               tttGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGaaaaa                                                                     <  1:1095123/100‑1 (MQ=255)                                                                               tttGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGaaaaa                                                                     >  2:1095123/1‑100 (MQ=255)                                                                                        tggtATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTAc                                                    >  1:930746/1‑108 (MQ=255)                                                                                        tggtATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTAc                                                    <  2:930746/108‑1 (MQ=255)                                                                                           tATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGgcgc       <  1:920918/150‑1 (MQ=255)                                                                                             tCCATGGCATGGGCGCTGGccatgccatggataccaccacacaaagcctggtcatcaccggctatgtcaccagccag                                                                              >  2:567790‑M2/1‑19 (MQ=255)                                                                                             tCCATGGCATGGGCGCTGGccatgccatggataccaccacacaaagcctggtcatcaccggctatgtcaccagccag                                                                              <  1:567790‑M2/77‑59 (MQ=255)                                                                                             tCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCAt            <  2:623858/143‑1 (MQ=255)                                                                                             tCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCAt            >  1:623858/1‑143 (MQ=255)                                                                                              ccATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTa    >  1:77445/1‑150 (MQ=255)                                                                                               catggcatggGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTAt   >  1:204558/1‑150 (MQ=255)                                                                                                atgggattgGCGCTGGTCATGCCTGCGGGGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATc  >  2:54553/1‑150 (MQ=255)                                                                                                 tggcatggGCGCTGGCCATGCCTGCGGCGTCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGttggcttcggccctcgcacctgaggt                >  2:156859‑M1/1‑109 (MQ=255)                                                                                                 tggcatggGCGCTGGCCATGCCTGCGGCGTCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGttggcttcggccctcgcacctgaggt                <  1:156859‑M1/135‑27 (MQ=255)                                                                                                   gcatggGCGCTGGccatgccatggataccaccacacaaagcctggtcatcaccggctatgtcac                                                                                     >  2:1097781‑M2/1‑13 (MQ=255)                                                                                                   gcatggGCGCTGGccatgccatggataccaccacacaaagcctggtcatcaccggctatgtcac                                                                                     <  1:1097781‑M2/64‑52 (MQ=255)                                                                                                        |                                                                                                                                              GCGGGCCTGTGTAAGCAGTTTGCGATCGAATGGTGCGACTGTGACCTGGCTGGTGACAT‑AGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATC  >  NC_002947/160883‑161126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.