New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	445062 =	39 (0.740)	6 (0.150)	6/192	NT	16.8%	intergenic (+32/‑256)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
	?	NC_002947	445155 =	29 (0.710)					intergenic (+125/‑163)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase

ATGGCCACCAGTGTCGTGCAACAGGCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGT  >  NC_002947/444917‑445211                                                                                                                                                  |                                                                                                                                                      gagttctgtggggtgacccgcgcttggcggaagccgatcaaacagttgtttgaaacttacgtttagctcagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTg                                                                                                                                                   >  2:1076654‑M1/146‑150 (MQ=255)    gCCACCAGTGTCGTGCAACAGGCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAG                                                                                                                                                <  2:287164‑M1/150‑1 (MQ=255)       tgtggggtgacccgcgcttggcggaagccgatcaaacagttgtttgaaacttacgtttagctcagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaaaCCTTGTa                                                                                                                                                 >  2:722016‑M1/140‑146 (MQ=255)       tgtggggtgacccgcgcttggcggaagccgatcaaacagttgtttgaaacttacgtttagctcagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaaaCCTTGTa                                                                                                                                                 <  1:722016‑M1/7‑1 (MQ=255)        ccaGTGTCGTGCAACAGGCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC                                                                                                                                            >  2:316606‑M1/1‑150 (MQ=255)         caGTGTCGTGCAACAGGCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCG                                                                                                                                           >  2:134679‑M1/1‑150 (MQ=255)            tgtCGTGCAACAGGCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAGGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC                                                                                                                                        >  2:921286‑M1/1‑150 (MQ=255)            tgtCGTGCAACAGGCGGTGCGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCAGCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC                                                                                                                                        <  1:574403‑M1/150‑1 (MQ=255)            ggttacccgcgcttggcggaagccgatcaaacagttgtttgaaacttacgtttagctcagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGc                                                                                                                                        >  1:740756‑M1/135‑150 (MQ=255)              tgacccgcgcttggcggaggccgatcaaacagttgtttgaaacttacgtttagctcacctttctgtcaaggatggactatggtgccatttacgccacgaacaatggcaaatcagtcatgccatgccacaaccCCTTGTAGGAGCGGGCtt                                                                                                                                      >  1:936130‑M1/133‑150 (MQ=255)               cGTGCAACAGGCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTG                                                                                                                                     <  2:1335414‑M1/150‑1 (MQ=255)                 tGCAACAGGCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCC                                                                                                                                   >  1:5940‑M1/1‑150 (MQ=255)                  gCAACAGGCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCC                                                                                                                                  <  2:5940‑M1/150‑1 (MQ=255)                    aaCAGGCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGC                                                                                                                                >  2:1335759‑M1/1‑150 (MQ=255)                        ggCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAt                                                                                                                            <  2:1319408/150‑1 (MQ=255)                        ggCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAt                                                                                                                            >  1:423761/1‑150 (MQ=255)                         gCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATg                                                                                                                           >  2:916909/1‑150 (MQ=255)                            gTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGt                                                                                                                        <  1:921286/150‑1 (MQ=255)                            cggaagccgatcaaacagttgtttgaaacttacgtttagctcagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGt                                                                                                                        >  2:209915‑M1/119‑150 (MQ=255)                              gggCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAgaggccc                                                                                                                      >  2:1167651‑M1/1‑143 (MQ=255)                                  aaGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATc                                                                                                                  >  1:71345/1‑150 (MQ=255)                                   aGACCGAAGTCGAGCGCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCa                                                                                                                 <  2:243350/150‑1 (MQ=255)                                    gACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAg                                                                                                                >  2:994840/1‑150 (MQ=255)                                     atcaaacagttgtttgaaacttacgtttagctcagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGc                                                                                                                                    <  1:725499‑M1/20‑1 (MQ=255)                                     atcaaacagttgtttgaaacttacgtttagctcagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGc                                                                                                                                    >  2:725499‑M1/110‑129 (MQ=255)                                     aCCGAAGTCGAGCTTGGCGCCAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCCACACCTCCGCCTGAATACTTGCGTCATCCCCGATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGa                                                                                                               <  2:678393/150‑1 (MQ=255)                                     aCCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGa                                                                                                               >  2:1045404/1‑150 (MQ=255)                                            tCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAt                                                                                                        <  2:423761/150‑1 (MQ=255)                                                  tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTc                                                                                                  >  1:29234/1‑150 (MQ=255)                                                  tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTc                                                                                                  >  1:85314/1‑150 (MQ=255)                                                   cGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCt                                                                                                 <  2:29234/150‑1 (MQ=255)                                                   cGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCt                                                                                                 <  2:1316844/150‑1 (MQ=255)                                                     gcgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGTCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTgg                                                                                               <  1:135941/150‑1 (MQ=255)                                                      cgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCTAATGCGTCCGATCAGACAACAATTTTGTCTGGt                                                                                              <  1:1045404/150‑1 (MQ=255)                                                       gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGCGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTc                                                                                             >  1:81669/1‑150 (MQ=255)                                                         aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGGCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTGCCGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCgg                                                                                           <  2:476203/150‑1 (MQ=255)                                                         aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTCTTTCAGCGCCTGCCTTGTAGGCGCGGGCTTGCCCGAGAATGCGTCCGATCAGACATCATTTTGGTCTCGTCgg                                                                                           <  2:414481/150‑1 (MQ=255)                                                         aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCgg                                                                                           <  2:71345/150‑1 (MQ=255)                                                           aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGc                                                                                         <  1:134679/150‑1 (MQ=255)                                                                tagctcagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCtt                                                                                    >  2:678734‑M1/83‑150 (MQ=255)                                                                     gtcatCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAgaggcccgaccagacaaaattgttgtctgatcggacgcattcgcgg                                                                               <  1:316606‑M1/148‑47 (MQ=255)                                                                     ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAgaggcccgaccagacaaaattgttgtctgatcggacgcattcgcgg                                                                               <  1:1335759‑M1/150‑47 (MQ=255)                                                                     ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAgaggcccgaccagacaaaattgttgtctgatcggacgcattcgcgg                                                                               <  1:1167651‑M1/150‑47 (MQ=255)                                                                     ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgg                                                                               >  1:994840‑M2/1‑143 (MQ=255)                                                                     cagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg                                                                               >  1:967503‑M1/78‑150 (MQ=255)                                                                            gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAgaggcccgaccagacaaaattgttgtctgatcggacgcattcgcgggca                                                                            <  2:549416‑M1/146‑50 (MQ=255)                                                                            gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAgaggcccgaccagacaaaattgttgtctgatcggacgcattcgcgggca                                                                            >  1:549416‑M1/1‑97 (MQ=255)                                                                            gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcc                                                                        <  2:631468‑M2/150‑15 (MQ=255)                                                                               gaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAgaggcccgaccagacaaaattgttgtctga                                                                                               >  1:834969‑M1/1‑94 (MQ=255)                                                                               gaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAgaggcccgaccagacaaaattgttgtctga                                                                                               <  2:834969‑M1/124‑31 (MQ=255)                                                                                      ttGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCCTCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGAGCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctaca                                                              <  1:1358734‑M2/150‑25 (MQ=255)                                                                                        ggCCGGATCATCGACACCTACGCCTGAATACTTGCGTCACCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaag                                                            >  1:1116525‑M2/1‑124 (MQ=255)                                                                                         gCCGGATCATCGACACCGACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaagg                                                           >  2:936883‑M2/1‑123 (MQ=255)                                                                                            ggATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATAAGACAACAAATTTTTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCGCCTACAAGGGtt                                                        >  1:1004809/1‑150 (MQ=255)                                                                                               tcatcGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTtgt                                                     <  1:631468/150‑1 (MQ=255)                                                                                                tgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCggg                                                                              >  2:61328‑M1/51‑124 (MQ=255)                                                                                                tgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCggg                                                                              <  1:61328‑M1/74‑1 (MQ=255)                                                                                                     acccccaCGCCTGAATCCTTGCGTCATCCCCTCTTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACACTTTTGTCTTGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcatg                                               <  2:555654/144‑1 (MQ=38)                                                                                                     acacCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTTCCCGCGGATGCGTCCGATCAGACTACACTTTGGTCTGGTCGGGCCTCTTCGCGGGGAAGCACGCTCCTACAAGGGTTTGtggcatg                                               >  2:147330/1‑150 (MQ=255)                                                                                                         cTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaagg                                                           >  1:941688‑M2/1‑107 (MQ=255)                                                                                                         cTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaagg                                                           <  2:941688‑M2/134‑28 (MQ=255)                                                                                                         cTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTggcatggcat                                           >  1:639574/1‑150 (MQ=255)                                                                                                               cTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGa                                                                                                               >  2:284296/1‑76 (MQ=255)                                                                                                               cTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGa                                                                                                               <  1:284296/76‑1 (MQ=255)                                                                                                               cTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGa                                     <  2:85314/150‑1 (MQ=255)                                                                                                               cTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGATTGACTGCAAACGCGTCCGATCAGACAACACTTTTGTCTGGTCGGGACTCTTCGCGGGCAAGCCCGCTCCTACAAGCGTGTGAGGCATGGCATAACTgt                                     >  2:277060/1‑149 (MQ=37)                                                                                                                  aaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCaa                                                                           <  2:1425505‑M1/77‑1 (MQ=255)                                                                                                                  aaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCaa                                                                           >  1:1425505‑M1/33‑109 (MQ=255)                                                                                                                  aaTACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTtgt                                                     >  2:886544/1‑131 (MQ=255)                                                                                                                  aaTACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTtgt                                                     <  1:886544/131‑1 (MQ=255)                                                                                                                       ttGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAgaggcccgaccagacaaaattgttgtctgatcggacgcattcgcgggcaagcc                                                                        >  2:457597‑M1/1‑54 (MQ=255)                                                                                                                       ttGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAgaggcccgaccagacaaaattgttgtctgatcggacgcattcgcgggcaagcc                                                                        <  1:457597‑M1/107‑54 (MQ=255)                                                                                                                          cGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCAtttt                          <  1:198627/150‑1 (MQ=255)                                                                                                                              aTCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTTCCCGCGAATGCCTCCGATCAGACAAAAATTTTGTCTGGTCGGGCCTCTTTGCGGGCAAGCCCCCTCCTACAAGGGTTTGTTGGATGGCGTGACTGATTTGTCATTTTTCGt                      >  2:1306069/1‑150 (MQ=38)                                                                                                                              aTCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGt                      <  1:916909/150‑1 (MQ=255)                                                                                                                               tCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGGTTGTGGCATGGCATGACTGATTTTCCATTTTTcttt                     >  2:783025/1‑147 (MQ=255)                                                                                                                                 cccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTTGc                   >  2:682380/1‑150 (MQ=255)                                                                                                                                 cccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGc                   >  2:32010/1‑150 (MQ=255)                                                                                                                                 cccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGc                   >  1:695452/1‑150 (MQ=255)                                                                                                                                      tttCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgg                                                                               >  2:557981‑M2/1‑78 (MQ=255)                                                                                                                                      tttCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgg                                                                               <  1:557981‑M2/85‑8 (MQ=255)                                                                                                                                               ctgcctTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGGCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCAt     >  1:743236/1‑150 (MQ=255)                                                                                                                                                  cctTGTAGGAGCGGGCTTGCCCGCGAAgaggcccgaccagacaaaattgttgtctgatcggacgcattcgcgggcaagcccgctcctacaaggcaggcgctgaaataggggatgacgcaagtattcaggcgtcggtgtcgatgatccggc  >  2:936883‑M1/1‑27 (MQ=255)                                                                                                                                                  cctTGTAGGAGCGGGCTTGCCCGCGAAgaggcccgaccagacaaaattgttgtctgatcggacgcattcgcgggcaagcccgctcctacaaggcaggcgctgaaataggggatgacgcaagtattcaggcgtag                  <  2:941688‑M1/134‑108 (MQ=255)                                                                                                                                                  cctTGTAGGAGCGGGCTTGCCCGCGAAgaggcccgaccagacaaaattgttgtctgatcggacgcattcgcgggcaagcccgctcctacaaggcaggcgctgaaataggggatgacgcaagtattcaggcgtag                  >  1:941688‑M1/1‑27 (MQ=255)                                                                                                                                                  |                                                                                                                                                      ATGGCCACCAGTGTCGTGCAACAGGCGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGT  >  NC_002947/444917‑445211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.