New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 499197 =94 (1.790)7 (0.170) 6/198 NT 8.7% intergenic (+38/‑258) uhpA/PP_0411 two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
?NC_002947 499284 = 71 (1.680)intergenic (+125/‑171) uhpA/PP_0411 two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein

Only 100 of 128 total aligned reads displayed.

CGCTGTCGAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAA  >  NC_002947/499050‑499346
                                                                                                                                                   |                                                                                                                                                      
tgcgtaggcaaaagagtagaagagacgcaagcgcccgaaaatcgggggtactgagagaatgccatcatccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaacctgt                                                                                                                                                      >  2:25510‑M1/148‑150 (MQ=255)
cgcTGTCGAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTAtgt                                                                                                                                                      >  1:1362857/1‑150 (MQ=255)
 gcgtaggcaaaagagtagaagagacgcaagcgcccgaaaatcgggggtactgagagaatgccatcatccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaacctgtg                                                                                                                                                     >  2:943811‑M1/147‑150 (MQ=255)
 gcgtaggcaaaagagtagaacacgcgcacccgcccgaaaatcgggggtactgagagaatgccatcatccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaacctgtg                                                                                                                                                     >  2:233330‑M1/147‑150 (MQ=255)
  cgtaggcaaaagagtagaagagacgcaagcgcccgaaaatcgggggtactgagagaatgccatcatccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTgg                                                                                                                                                    >  1:695981‑M1/146‑150 (MQ=255)
        aGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCgg                                                                                                                                              >  1:89331/1‑150 (MQ=255)
         aaaagagtagaagagacgcaagcgcgcgaaaatcgggggtactgatagaatgccatcatccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCggg                                                                                                                                             <  1:743784‑M1/12‑1 (MQ=255)
         aaaagagtagaagagacgcaagcgcccgaaaatcgggggtactgagagaatgccatcatccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCggg                                                                                                                                             <  2:1364118‑M1/12‑1 (MQ=255)
         aaaagagtagaagagacgcaagcgcccgaaaatcgggggtactgagagaatgccatcatccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCggg                                                                                                                                             <  2:1060700‑M1/12‑1 (MQ=255)
           aagagtagaagagacgcaagcgcccgaaaatcgggggtactgagagaatgccatcatccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCa                                                                                                                                           <  2:1312360‑M1/14‑1 (MQ=255)
           aaGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCa                                                                                                                                           >  2:1384401/1‑150 (MQ=255)
             gACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATg                                                                                                                                         >  2:681707/1‑150 (MQ=255)
               ccATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGcc                                                                                                                                       >  1:485481/1‑150 (MQ=255)
                tagaagagacgcaagcgcccgaaaatcgggggtactgagagactgccatcatccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCATGccc                                                                                                                                      >  1:1122987‑M1/132‑150 (MQ=255)
                 aTCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcg                                                                                                                                     >  1:105851/1‑150 (MQ=255)
                 aTCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcg                                                                                                                                     >  2:893545/1‑150 (MQ=255)
                 aTCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcg                                                                                                                                     >  1:742660/1‑150 (MQ=255)
                     gagccggaagcgcccgaaaatcgggggtactgagagaatgccatcatccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCATGCCCGCGaa                                                                                                                                 <  2:354227‑M1/24‑1 (MQ=255)
                     gagacgcaagcgcccgaaaatcgggggtactgagagaatgccatcatccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCATGCCCGCGaa                                                                                                                                 <  1:308297‑M1/24‑1 (MQ=255)
                         ccACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACggg                                                                                                                             >  2:283704/1‑150 (MQ=255)
                          cacaAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggc                                                                                                                            >  1:316038/1‑150 (MQ=255)
                                     ccTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCctgc‑tg                                                                                                                >  1:340818/1‑150 (MQ=255)
                                          tGCAGAAGGTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGAtctc                                                                                                           >  2:20101/1‑150 (MQ=255)
                                           gCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCAt                                                                                                                                          <  1:1305473/119‑1 (MQ=255)
                                           gCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATctct                                                                                                          <  1:893545/150‑1 (MQ=255)
                                             aGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAGGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTAt                                                                                                        >  2:1409861/1‑150 (MQ=255)
                                             aGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TTATCTCTAt                                                                                                        >  1:428697/1‑150 (MQ=255)
                                               aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATgg                                                                                                      <  1:777997/150‑1 (MQ=255)
                                                      aaGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGccc                                                                                                                                      >  1:506450/1‑112 (MQ=255)
                                                      aaGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGccc                                                                                                                                      <  2:506450/112‑1 (MQ=255)
                                                        gTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCgg                                                                                             >  2:183383/1‑150 (MQ=255)
                                                                gCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTcg                                                                                     >  2:567305/1‑150 (MQ=255)
                                                                  atccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTcgcg                                                                                   >  1:116525‑M1/82‑150 (MQ=255)
                                                                   tccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                  >  1:645431‑M1/81‑150 (MQ=255)
                                                                   tccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                  <  2:645431‑M1/70‑1 (MQ=255)
                                                                   ggCGGAGCTGGTGAAGTACGCCATGGAGCACAGGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                  <  1:1409861/150‑1 (MQ=255)
                                                                         gCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGACAGCGTGA‑CTCTATGGCTGAGCCGGCCTCTTAGCGGGCATgg                                                                            >  1:74125/1‑149 (MQ=255)
                                                                           tGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGccc                                                                          >  1:568614/1‑150 (MQ=255)
                                                                           gaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                  <  2:714966‑M1/70‑1 (MQ=255)
                                                                           gaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                  >  1:714966‑M1/73‑142 (MQ=255)
                                                                             gTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGc                                                                        >  2:132357/1‑150 (MQ=255)
                                                                             gTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGAAATAAGCCCGATGCGCTCTCTTCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGc                                                                        <  2:1106667/150‑1 (MQ=255)
                                                                                      gCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCcacata                                                               <  2:440346/150‑3 (MQ=255)
                                                                                       ccATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTa                                                                                                         >  2:267884/1‑107 (MQ=255)
                                                                                        cATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGTGAAGGGGCCCGGCGTGC‑TGCTCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGtt                                                             <  2:1280977/150‑1 (MQ=39)
                                                                                        cATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGa                                                                                                  >  1:207833/1‑113 (MQ=255)
                                                                                         aTGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGttt                                                            >  2:793790/1‑150 (MQ=255)
                                                                                            gAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGt                                                         <  1:793790/150‑1 (MQ=255)
                                                                                                acaAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggccggc                                                                                                                        >  1:580483/1‑81 (MQ=255)
                                                                                                acaAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGtt                                                     >  2:1350575/1‑150 (MQ=255)
                                                                                                acaAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGtt                                                     >  2:1282277/1‑150 (MQ=255)
                                                                                                acaAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGATGGTGCCTATGTGGGAGCGGGCAGTCCTGCTAACGGGCCTGGACTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGtt                                                     >  1:387285/1‑150 (MQ=38)
                                                                                                  aaGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTgg                                                   >  2:1273569/1‑150 (MQ=255)
                                                                                                  aaGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTgg                                                   >  1:1041132/1‑150 (MQ=255)
                                                                                                  aaGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTgg                                                   >  1:331319/1‑150 (MQ=255)
                                                                                                  aaGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTg                                                    >  1:57047/1‑149 (MQ=255)
                                                                                                  aaGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTg                                                    <  2:57047/149‑1 (MQ=255)
                                                                                                   tacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCggg                                                                                 >  2:365512‑M1/49‑119 (MQ=255)
                                                                                                   aGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGc                                                  <  2:786513/150‑1 (MQ=255)
                                                                                                     ctgatctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTc                                                <  1:567305/150‑1 (MQ=255)
                                                                                                        atctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGTTCGCa                                             >  1:1225881/1‑150 (MQ=255)
                                                                                                         tctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCaa                                            >  1:706571/1‑150 (MQ=255)
                                                                                                          ctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAg                                           <  2:340818/150‑1 (MQ=255)
                                                                                                           tgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggcctggc                                                                                                                       >  1:876231/1‑74 (MQ=255)
                                                                                                           tgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggcctggc                                                                                                                       <  2:876231/74‑1 (MQ=255)
                                                                                                           tgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCgg                                                                                             <  1:154653/99‑1 (MQ=255)
                                                                                                           tgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCgg                                                                                             >  2:154653/1‑99 (MQ=255)
                                                                                                           ggatTGCGACATACGGGTGCCCGAAACTTGCCGAAGTATATGGCGTTGCGGGCATGCCCGCGAACGGGGCTGGCCTGC‑GGATCTCTATGGCTGAGCCGGCCGCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAgg                                          <  1:1384401/149‑1 (MQ=38)
                                                                                                            gatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTg                                                        >  1:70525/1‑135 (MQ=255)
                                                                                                            gatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTg                                                        <  2:70525/135‑1 (MQ=255)
                                                                                                                gCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCAtt                                     <  2:858623/150‑1 (MQ=255)
                                                                                                                 cGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTc                                    <  1:1350575/150‑1 (MQ=255)
                                                                                                                  gACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTcc                                   >  1:2563/1‑150 (MQ=255)
                                                                                                                     aTACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                  <  2:51554/100‑1 (MQ=255)
                                                                                                                     aTACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                  >  1:51554/1‑100 (MQ=255)
                                                                                                                     aTACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAAt                                >  2:406496/1‑150 (MQ=255)
                                                                                                                     aTACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAAt                                >  1:175476/1‑150 (MQ=255)
                                                                                                                      tACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATc                               <  2:568614/150‑1 (MQ=255)
                                                                                                                        cGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATccc                             <  1:1160251/150‑1 (MQ=255)
                                                                                                                          ggatcccGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGc                           >  1:630577/5‑150 (MQ=255)
                                                                                                                                cGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGTCTCTTCGCGGGCCTGCCCGCTCCCCCAGGTTTCGTGGTTGGCTCGCAAGGGCGTTCCAATCCCGCCATCCt                     >  2:593279/1‑150 (MQ=255)
                                                                                                                                cGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCt                     >  1:756186/1‑150 (MQ=255)
                                                                                                                                 gAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCtt                    <  1:20101/150‑1 (MQ=255)
                                                                                                                                 gAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACCGGCCTGGCCTGC‑TAAGCTCTATGGCTGAGCCGGCCTCTTCGCGGTAATGCCCGCTCCCACAGGATTCGTGGTTGGCTCGCAGGAGCATTCCAATCGCGCCATCCtt                    >  1:616677/1‑150 (MQ=255)
                                                                                                                                     cTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAg                <  1:1187369/150‑1 (MQ=255)
                                                                                                                                     cTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAg                >  2:386949/1‑150 (MQ=255)
                                                                                                                                      ttGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAgg               >  1:1125780/1‑150 (MQ=255)
                                                                                                                                      ttGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAgg               <  2:1041132/150‑1 (MQ=255)
                                                                                                                                      ttGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAgg               <  2:331319/150‑1 (MQ=255)
                                                                                                                                          cGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGa           >  2:1138018/1‑150 (MQ=255)
                                                                                                                                           gAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGAt          <  1:40888/150‑1 (MQ=255)
                                                                                                                                           gAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGAt          >  2:175878/1‑150 (MQ=255)
                                                                                                                                              gCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTGTTGTGGGGCACGCTTGTTCCTTCATGTTTCGTGGTTTGCTCGCAAGGGCATTCCAATCCCGCCAACCTTGTAGGGCGATccc       >  1:461175/1‑150 (MQ=255)
                                                                                                                                              gCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATccc       <  2:387285/150‑1 (MQ=255)
                                                                                                                                               ccTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCt      <  2:485481/150‑1 (MQ=255)
                                                                                                                                                 tATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTa                 >  2:763465/1‑137 (MQ=255)
                                                                                                                                                 tATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTa                 <  1:763465/137‑1 (MQ=255)
                                                                                                                                                 tATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATccc       >  2:751269/1‑147 (MQ=255)
                                                                                                                                                 tATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTac    >  2:93430/1‑150 (MQ=255)
                                                                                                                                                   TGTGGGAGCGGGCATGCCCGCGACCGGGCCTGGCCTGG‑TGATCTCGATGGCTTAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTacaa  >  2:1225881‑M1/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                      
CGCTGTCGAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGC‑TGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAA  >  NC_002947/499050‑499346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.