New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	561384 =	60 (1.140)	4 (0.080)	4/224	NT	7.0%	intergenic (+18/‑49)	rpmJ/PP_mr09	50S ribosomal protein L36/Alpha_RBS regulatory region
	?	NC_002947	561412 =	51 (1.070)					intergenic (+46/‑21)	rpmJ/PP_mr09	50S ribosomal protein L36/Alpha_RBS regulatory region

TCGAGGAGTCGGTAATGAAAGTTCGTGCATCGGTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTCCAGATAAC  >  NC_002947/561236‑561533                                                                                                                                                     |                                                                                                                                                       tCGAGGAGTCGGTAATGAAAGTTCGTGCATCGGTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCaaa                                                                                                                                                       <  2:248760/150‑1 (MQ=255) tCGAGGAGTCGGTAATGAAAGGTCGTGCATCGGTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCaaa                                                                                                                                                       <  2:303993/150‑1 (MQ=255)      gagTCGGTAATGAAAGTTCGTGCATCGGTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCcag                                                                                                                                                  <  1:1224580/150‑1 (MQ=255)       agTCGGTAATGAAAGTTCGTGCATCGGTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCcagc                                                                                                                                                 <  1:870417/150‑1 (MQ=255)               aTGAAAGTTCGTGCATCGGTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑Agtg                                                                                                                                        >  1:1011997/1‑150 (MQ=255)                 gAAAGTTCGTGCATCGGTGAAAAAGCTGTGCAGTCAAACCTTTTTCATCCGGCTCGAAGCCGTCGTACTAGTGATCTACAGGGTGCACCCCTGGCAGAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGtgtg                                                                                                                                      >  1:1391434/1‑150 (MQ=255)                        cGTGCATCGGTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTgg                                                                                                                               <  2:339290/150‑1 (MQ=255)                            cATCGGTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTg                                                                                                                           >  1:370742/1‑150 (MQ=255)                             tatctggaatgttgacgcctgcaatacgggccattcagtgggactccaattgacagctacctacgccccggaagccaagaaatagggcgcgagataatatcgctgtagaaacgaataatcAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGa                                                                                                                          >  1:1084212‑M1/121‑150 (MQ=255)                               cGGTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGatt                                                                                                                        <  2:1276637/150‑1 (MQ=255)                                   gAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTc                                                                                                                    <  1:977165/150‑1 (MQ=255)                                   gAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTc                                                                                                                    <  2:747120/150‑1 (MQ=255)                                             tgCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAAccc                                                                                                                                                    <  2:671648/109‑1 (MQ=255)                                             tgCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAAccc                                                                                                                                                    >  1:671648/1‑109 (MQ=255)                                                 gTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGat                                                                                                      <  1:414062/150‑1 (MQ=255)                                                    aCTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTTTGCTGCTGGGTTGATTATTCGTTTCTACAGCGAtatt                                                                                                   <  2:1072975/150‑1 (MQ=255)                                                     cTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGttt                                                                                                                <  2:1037070/136‑1 (MQ=255)                                                     cTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGttt                                                                                                                >  1:1037070/1‑136 (MQ=255)                                                       gCAAGATGATCCGGCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTAtc                                                                                                <  2:714414/150‑1 (MQ=255)                                                       gCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTAtc                                                                                                >  2:1010968/1‑150 (MQ=255)                                                        cAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTAtct                                                                                               >  1:1251520/1‑150 (MQ=255)                                                         aaGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGCTGATTATTCGTTTCTACAGCGATATTAtctc                                                                                              <  1:31468/150‑1 (MQ=255)                                                            atcatcCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTcgcg                                                                                           >  1:33521/1‑150 (MQ=255)                                                              catcCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGcc                                                                                         >  2:426664/1‑150 (MQ=255)                                                                        gAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTg                                                                               <  2:256697/150‑1 (MQ=255)                                                                        gAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTg                                                                               <  2:1251520/150‑1 (MQ=255)                                                                              gtcgtACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTcc                                                                         >  1:422025/1‑150 (MQ=255)                                                                              gtcgtACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTcc                                                                         <  1:869452/150‑1 (MQ=255)                                                                               tcgtACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTGCTTGGCTTCCg                                                                        <  1:426664/150‑1 (MQ=255)                                                                                 gtACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCt                                                                                 <  2:44667/139‑1 (MQ=255)                                                                                 gtACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCt                                                                                 >  1:44667/1‑139 (MQ=255)                                                                                 gtACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCggg                                                                      <  2:258080/150‑1 (MQ=255)                                                                                  tACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCgggg                                                                     <  2:370742/150‑1 (MQ=255)                                                                                       gTGATCTGCAGCGCGGAACCGCGTCAAAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCgtag                                                                <  2:395132/150‑1 (MQ=255)                                                                                          aTCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCgtaggta                                                             >  1:358752/1‑150 (MQ=255)                                                                                           tCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCgtaggtag                                                            <  2:429100/150‑1 (MQ=255)                                                                                           tCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCgtaggtag                                                            >  1:232026/1‑150 (MQ=255)                                                                                                     ggAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGttt                                                                                                                >  1:1369705/1‑88 (MQ=255)                                                                                                     ggAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGttt                                                                                                                <  2:1369705/88‑1 (MQ=255)                                                                                                       aaCCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTg                                                                               >  1:897240/1‑119 (MQ=255)                                                                                                       aaCCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTg                                                                               <  2:897240/119‑1 (MQ=255)                                                                                                        aCCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAg                                               >  2:1259929/1‑150 (MQ=255)                                                                                                          cgcgTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTc                                             <  2:232026/150‑1 (MQ=255)                                                                                                            cgTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCgt                                                                  <  2:1016993/127‑1 (MQ=255)                                                                                                            cgTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCgt                                                                  >  1:1016993/1‑127 (MQ=255)                                                                                                               cacaAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGtt                                                                                                                            <  2:162900/66‑1 (MQ=255)                                                                                                               cacaAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGtt                                                                                                                            >  1:162900/1‑66 (MQ=255)                                                                                                                acaAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTAt                                                                                     <  1:950681/104‑1 (MQ=255)                                                                                                                acaAACAGCGCCAAGGCGGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTAt                                                                                     >  2:950681/1‑104 (MQ=255)                                                                                                                   aaCAGCGCCAAGGCTCAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAAt                                    <  1:1168451/150‑1 (MQ=255)                                                                                                                     cAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATgg                                  <  2:33521/150‑1 (MQ=255)                                                                                                                       gcgcCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTg                                                                               <  2:284257/103‑1 (MQ=255)                                                                                                                       gcgcCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTg                                                                               >  1:284257/1‑103 (MQ=255)                                                                                                                       gagatcctatcgctgtagaaacgaataatcAACCGAGCAGCA‑CACTAGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGcc                                <  2:1235918‑M1/120‑1 (MQ=255)                                                                                                                         gcCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCg                              >  2:272222/1‑150 (MQ=255)                                                                                                                          ccAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGa                                                <  2:987571/131‑1 (MQ=255)                                                                                                                          ccAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGa                                                >  1:987571/1‑131 (MQ=255)                                                                                                                           cAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTa                            <  2:1391434/150‑1 (MQ=255)                                                                                                                               gCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGc                        >  1:997060/1‑150 (MQ=255)                                                                                                                                 tGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAg                      <  2:1011997/150‑1 (MQ=255)                                                                                                                                         aaacgaataatcAACCCAGCAGCACACTA‑GCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGa                                                >  2:903020‑M1/13‑116 (MQ=255)                                                                                                                                         aaacgaataatcAACCCAGCAGCA‑CACTAGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGa                                                <  1:903020‑M1/104‑1 (MQ=255)                                                                                                                                            tGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGa                                                >  1:804628/1‑113 (MQ=255)                                                                                                                                            tGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGa                                                <  2:804628/113‑1 (MQ=255)                                                                                                                                            tGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGt                                              >  1:689019/1‑115 (MQ=255)                                                                                                                                            tGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGt                                              <  2:689019/115‑1 (MQ=255)                                                                                                                                            tGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACAtt           >  2:294910/1‑150 (MQ=255)                                                                                                                                              cgcTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTcc         <  2:440038/150‑1 (MQ=255)                                                                                                                                                     AACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTCCAGATAAc  >  1:1010968‑M1/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                       TCGAGGAGTCGGTAATGAAAGTTCGTGCATCGGTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCT‑AGTGTGCTGCTGGGTTGATTATTCGTTTCTACAGCGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTCCAGATAAC  >  NC_002947/561236‑561533

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.