New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1149932	53 (1.010)	6 (0.120) +C	4/244	NT	11.4%	intergenic (‑173/+84)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	2071211 =	41 (0.780)					intergenic (+120/+107)	PP_1846/PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor

TTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGT  >  NC_002947/1149783‑1150080                                                                                                                                                      |                                                                                                                                                     ttAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCgg                                                                                                                                                      <  1:465890/150‑1 (MQ=255)    aTGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCt                                                                                                                                                   >  2:1148302/1‑150 (MQ=255)     tGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCtt                                                                                                                                                  <  1:1044368/150‑1 (MQ=255)      gATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTg                                                                                                                                                 >  1:1311580/1‑150 (MQ=255)       aTAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGc                                                                                                                                                <  2:1311580/150‑1 (MQ=255)            gCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAACCTGGCGCGATCCCTGGGGGAGCCGGCTTTTCcgcg                                                                                                                                           >  2:300456/1‑150 (MQ=255)             cTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTTGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGa                                                                                                                                          >  2:272546/1‑150 (MQ=255)              ttATCATCCGTGCGGCAGGTCAAGTGTGGAAGTATCAGGAAAAGGTACAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCATTTTCTAAAAGCTGGCGCGATCCCTGGCTCAGCGGGCTTGCCcgcgta                                                                                                                                         >  2:298675/1‑148 (MQ=38)                   atcCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACgg                                                                                                                                    >  1:1134953/1‑150 (MQ=255)                              aGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGt                                                                                                                         <  1:1148302/150‑1 (MQ=255)                                 tCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGcc                                                                                                                      >  2:1288769/1‑150 (MQ=255)                                 tCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGcc                                                                                                                      <  2:1134953/150‑1 (MQ=255)                                   aaGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCAt                                                                                                                    >  2:6860/1‑150 (MQ=255)                                   aaGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCAt                                                                                                                    >  1:265211/1‑150 (MQ=255)                                     gtgtTGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATcc                                                                                                                  <  1:112350/150‑1 (MQ=255)                                          gAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCcaccac                                                                                                             >  1:218380/1‑150 (MQ=255)                                             ttATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGgt                                                                                                          >  2:1275623/1‑150 (MQ=255)                                               aTCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcc                                                                                                        >  1:487328‑M1/1‑104 (MQ=255)                                                tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGGGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGtt                                                                                                       <  2:1044673/150‑1 (MQ=255)                                                tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGtt                                                                                                       >  1:385821/1‑150 (MQ=255)                                                tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGtt                                                                                                       >  1:492235/1‑150 (MQ=255)                                                tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGCGAGCAACTGTCTTGCTCAATTTCTAACCGCTGGCGCGATAACTGATTGATCTTGGTTTCCCTCATACACGGGCGAAGCCCGTGCCATCCACCACGGTGtt                                                                                                       <  1:1097240/150‑1 (MQ=25)                                                         ggTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTcgcg                                                                                              <  2:385821/150‑1 (MQ=255)                                                          gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGACGCGACCCGTGTGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgg                                                                                             >  2:1175119‑M1/1‑93 (MQ=255)                                                             aaGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCa                                                                                          >  2:82633/1‑150 (MQ=255)                                                                  tGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagccc                                                                                     <  2:487328‑M1/150‑66 (MQ=255)                                                                  tGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGcc                                                                                     >  2:283254/1‑150 (MQ=255)                                                                       tCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTcc                                                                                >  1:72060/1‑150 (MQ=255)                                                                            ggATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCGCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCacac                                                                           <  1:480750/150‑1 (MQ=255)                                                                             gATGCCGTTTGCTTTTTTTGGGAGCAACTGGCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGctttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagcccgctcccccagg                                                                          <  2:525884‑M1/150‑77 (MQ=255)                                                                              aTGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACgg                                                                         <  2:72060/150‑1 (MQ=255)                                                                              aTGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTATCCGGCGCGGGCAAGGCCGCTCCCACACgg                                                                         <  1:397495/150‑1 (MQ=18)                                                                              aTGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTCACCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACgg                                                                         <  1:531546/150‑1 (MQ=255)                                                                                gCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGt                                                                       <  2:218380/150‑1 (MQ=255)                                                                                  cGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACggg                                                                                                                                   <  1:907676/88‑1 (MQ=255)                                                                                  cGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACggg                                                                                                                                   >  2:907676/1‑88 (MQ=255)                                                                                   gTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgc                                                                    <  1:82633/150‑1 (MQ=255)                                                                                   gTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGAGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgc                                                                    <  2:73473/150‑1 (MQ=255)                                                                                   gTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGAGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgc                                                                    <  2:73409/150‑1 (MQ=255)                                                                                       gCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTca                                                                <  2:492235/150‑1 (MQ=255)                                                                                             tttGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTcagccagc                                                          <  1:822768/150‑1 (MQ=255)                                                                                                 ggAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCgg                                                      <  1:6860/150‑1 (MQ=255)                                                                                                  gAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                                                      <  2:122297/117‑1 (MQ=255)                                                                                                  gAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                                                      >  1:122297/1‑117 (MQ=255)                                                                                                   aGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACTGGCCAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTg                                                    <  1:956930/150‑1 (MQ=255)                                                                                                      aaCTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCCTCCACAACGGGGTAGACTTCCCTGTCAAGTCCGCGCCTACGCTGGTCTGGTCAGCCCGCCCGGTGCAg                                                 >  2:590048/1‑150 (MQ=14)                                                                                                      aaCTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCATGGTGTTGGCTTCGCGGGCAAGGCCGCTTCCACACGGGTCGCGTCAGCCAGCCCGGTGCAg                                                 <  2:163419/150‑1 (MQ=255)                                                                                                      aaCTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAg                                                 >  1:734066/1‑150 (MQ=255)                                                                                                               gCTCAATTTCTAAAAGCTAGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACATGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCa                                        <  1:272546/150‑1 (MQ=255)                                                                                                                 tCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGt                                      >  2:922866/1‑150 (MQ=255)                                                                                                                  cAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGTCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGGGCCGCGCCAGGCAGtt                                     >  2:1153491/1‑150 (MQ=255)                                                                                                                       tCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa                                <  1:922866/150‑1 (MQ=255)                                                                                                                       tCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGACCGTTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa                                <  1:1288769/150‑1 (MQ=255)                                                                                                                        cTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAg                               >  2:1192950/1‑150 (MQ=255)                                                                                                                         tAAAAGCTGGCGCGATCCCTGGGGGAGCGGTCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGt                                                     <  1:1359643/127‑1 (MQ=255)                                                                                                                         tAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGt                                                     >  2:1359643/1‑127 (MQ=255)                                                                                                                                   cgcgATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGc                    <  1:300456/150‑1 (MQ=255)                                                                                                                                        tCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAAc               <  2:734066/150‑1 (MQ=255)                                                                                                                                           cTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCg                                                                                    <  2:749437/78‑1 (MQ=40)                                                                                                                                           cTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCg                                                                                    >  1:749437/1‑78 (MQ=40)                                                                                                                                               gggAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACt        >  1:640518/1‑150 (MQ=255)                                                                                                                                                 gAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccg                                                                                                      <  2:560207‑M1/54‑49 (MQ=255)                                                                                                                                                 gAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccg                                                                                                      >  1:560207‑M1/1‑6 (MQ=255)                                                                                                                                                     gggCTTGCCCGCGAACACGGGCGAAGCGGGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGt  <  1:298675/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     TTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGT  >  NC_002947/1149783‑1150080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.