New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1190141	43 (0.820)	4 (0.080)	4/236	NT	8.2%	coding (199/234 nt)	tatA‑I	twin arginine protein export complex subunit
	?	NC_002947	= 1190161	48 (0.950)					coding (179/234 nt)	tatA‑I	twin arginine protein export complex subunit

TGGCCCAGGCCGCGGCCGAGGGTACGGGCTGCCACCGGCAGGCGCTCGGGGCCCAGCACCAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTGGATCGCCTCGCCCACATCGCTACCCAGGCCCTTCAGGCGCTTGGTACCAAACA  >  NC_002947/1189994‑1190284                                                                                                                                                    |                                                                                                                                                tGGCCCAGGCCGCGGCCGAGGGTACGGGCTGCCACCGGCAGGCGCTCGGGGCCCAGCACCAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACtt                                                                                                                                               <  2:168580/150‑1 (MQ=255)     ccAGGCCGCGGCCGAGGGTACGGGCTGCCACCGGCAGGCGCTCGGGGCCCAGCACCAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGcc                                                                                                                                           <  1:1317741/150‑1 (MQ=255)            gcgGCCGAGGGTACGGGCTGCCACCGGCAGGCGCTCGGGGCCCAGCACCAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGc                                                                                                                                    <  1:527038/150‑1 (MQ=255)                             cTGCCACCGGCAGGCGCTCGGGGCCCAGCACCAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGcac                                                                                                                   <  2:818016/150‑1 (MQ=255)                                ccACCGGCAGGCGCTCGGGGCCCAGCACCAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATg                                                                                                                >  2:1384648/1‑150 (MQ=255)                                 cACCGGCAGGCGCTCGGGGCCCAGCACCAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATgc                                                                                                               >  2:1328840/1‑150 (MQ=255)                                  aCCGGCAGGCGCTCGGGGCCCAGCACCAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATgcg                                                                                                              >  1:934191/1‑150 (MQ=255)                                    cGGCAGGCGCTCGGGGCCCAGCACCAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGcc                                                                                                            <  2:1166264/150‑1 (MQ=255)                                     ggCAGGCGCTCGGGGCCCAGCACCAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCt                                                                                                           >  2:954392/1‑150 (MQ=255)                                            gcTCGGGGCCCAGCACCAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAgc                                                                                                    <  1:691072/150‑1 (MQ=255)                                                     ccAGCACCAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACATCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGc                                                                                           >  2:1010164/1‑150 (MQ=255)                                                           ccAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGGTTGCTGGGCAACagtgcccgctgaacggccaagttgcccagca                                                                                                                  <  2:816729‑M1/121‑32 (MQ=255)                                                           ccAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGGTTGCTGGGCAACagtgcccgctgaacggccaagttgcccagca                                                                                                                  >  1:816729‑M1/1‑90 (MQ=255)                                                            naaCAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTNGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGCGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTg                                                                                    >  1:303015/2‑150 (MQ=255)                                                                 gcgcGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTcacc                                                                               >  2:956104/1‑150 (MQ=255)                                                                     gacgacGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCAccc                                                                           <  1:956104/150‑1 (MQ=255)                                                                       cgacgCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCAt                                                                         <  2:1341762/150‑1 (MQ=255)                                                                          cgCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCAt                                                                                      <  2:766021/134‑1 (MQ=255)                                                                          cgCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCAt                                                                                      >  1:766021/1‑134 (MQ=255)                                                                           gCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGAc                                                                     >  2:119171/1‑150 (MQ=255)                                                                           gCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGAc                                                                     >  1:560116/1‑150 (MQ=255)                                                                                   gcagcaACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGaaa                                                             >  1:158076/1‑150 (MQ=255)                                                                                   gcagcaACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGaaa                                                             >  2:585546/1‑150 (MQ=255)                                                                                       caACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCGGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGGCTTGCGAAAAccc                                                         >  2:192277/1‑150 (MQ=255)                                                                                        aaCTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCt                                                        <  2:1035892/150‑1 (MQ=255)                                                                                              cTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGAACGATTGTCACCACCCATGGACTTGCGAAAACCCTGGAtcg                                                  >  1:1084825/1‑150 (MQ=255)                                                                                               tGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTGGAtcgc                                                 <  2:134692/150‑1 (MQ=255)                                                                                                       aCCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTc                                                                                                                                       <  1:188788/56‑1 (MQ=255)                                                                                                       aCCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTc                                                                                                                                       >  2:188788/1‑56 (MQ=255)                                                                                                         cTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAgc                                                                                                    <  2:288171/89‑1 (MQ=255)                                                                                                         cTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAgc                                                                                                    >  1:288171/1‑89 (MQ=255)                                                                                                         cTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTGGATCGCCTCGCCcgca                                       >  1:675274/1‑150 (MQ=255)                                                                                                          tCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACagtgcccgctgaacggccaa                                                                                                                             <  2:79818‑M1/63‑21 (MQ=255)                                                                                                          tCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACagtgcccgctgaacggccaa                                                                                                                             >  1:79818‑M1/1‑43 (MQ=255)                                                                                                          tCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTGGATCGCCTCGCCCACAt                                      >  2:911491/1‑150 (MQ=255)                                                                                                             aaCATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTGGATCGCCTCGCCcaca                                       <  1:859810/146‑1 (MQ=255)                                                                                                             aaCATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTGGATCGCCTCGCCcaca                                       >  2:859810/1‑146 (MQ=255)                                                                                                                        tGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTGGATCGCCTCGCCCACATCGCTACCCAGGccc                        >  1:476292/1‑150 (MQ=255)                                                                                                                          gCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGc                                                                 <  1:1199045/107‑1 (MQ=255)                                                                                                                          gCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGc                                                                 >  2:1199045/1‑107 (MQ=255)                                                                                                                            ggTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTGGATCGCCTCGCCCACATCGCTACCCAGGCCCTTCa                    <  2:158076/150‑1 (MQ=255)                                                                                                                                    tGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTGGATCGCCTCGCCCACATCGCTACCCAGGCCCTTCAGGCGCTTg            <  1:585546/150‑1 (MQ=255)                                                                                                                                    tGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTGGATCGCCTCGCCCACATCGCTACCCAGGCCCTTCAGGCGCTTg            <  2:675274/150‑1 (MQ=255)                                                                                                                                        aTTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTGGATCGCCTCGCCCACATCGCTACCCAGGCCCTTCAGGCGCTTGGTAc        <  2:560116/150‑1 (MQ=255)                                                                                                                                          tGCTGGGCAACTTGGCCGTTCAGCGGGCACTgttgcccagcaacctcaagcggaccgccaggcctgatgttcgaggtaggcttcagcgagttgctgctgatcggcgtcgtcgcgctgttgg                                   >  1:816729‑M2/1‑31 (MQ=255)                                                                                                                                          tGCTGGGCAACTTGGCCGTTCAGCGGGCACTgttgcccagcaacctcaagcggaccgccaggcctgatgttcgaggtaggcttcagcgagttgctgctgatcggcgtcgtcgcgctgttgg                                   <  2:816729‑M2/121‑91 (MQ=255)                                                                                                                                            cTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTGGATCGCCTCGCCCACATCGCTACCCAGGCCCTTCAGGCGCTTGGTACCaaa    <  2:476292/150‑1 (MQ=255)                                                                                                                                              gggCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTg                                                       >  2:40113/1‑97 (MQ=255)                                                                                                                                              gggCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTg                                                       <  1:40113/97‑1 (MQ=255)                                                                                                                                              gggCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTGGATCGCCTCGCCCACATCGCTACCCAGGCCCTTCAGGCGCTTGGTACCAAACa  <  1:1010571/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                TGGCCCAGGCCGCGGCCGAGGGTACGGGCTGCCACCGGCAGGCGCTCGGGGCCCAGCACCAACAGCGCGACGACGCCGATCAGCAGCAACTCGCTGAAGCCTACCTCGAACATCAGGCCTGGCGGTCCGCTTGAGATTGCTGGGCAACTTGGCCGTTCAGCGGGCACTGTTGCTGCACATGCGCCTGGTCAGCGGCGCTGGCGTCATTGTCACCACCCATGGACTTGCGAAAACCCTGGATCGCCTCGCCCACATCGCTACCCAGGCCCTTCAGGCGCTTGGTACCAAACA  >  NC_002947/1189994‑1190284

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.