New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1380493 = | 49 (0.930) | 5 (0.100) +CTGAC |
5/236 | NT | 11.2% | intergenic (‑213/+49) | PP_1202/PP_t67 | phospholipids modification protein/tRNA‑Met |
? | NC_002947 | 1380748 = | 34 (0.650) | intergenic (‑130/+5) | PP_t67/PP_t66 | tRNA‑Met/tRNA‑Met |
AAACGTATCCAATGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTG > NC_002947/1380345‑1380641 | aaaCGTATCCAATGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGcaa < 1:1412141/150‑1 (MQ=255) aCGTATCCAATGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGcaaca > 2:178043/1‑150 (MQ=255) aaTGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCcgc > 1:1180256/1‑150 (MQ=255) aaTGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCcgc > 1:1346206/1‑150 (MQ=255) aTGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCcgcg > 1:1203552/1‑150 (MQ=255) gTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCgct > 1:877138/1‑150 (MQ=255) aCTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCgctgct < 2:372905/150‑1 (MQ=255) tCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCttt > 1:273578/1‑150 (MQ=255) tCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCCTACCGCTCCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCttt < 1:88612/150‑1 (MQ=255) tCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAg > 2:259085/1‑150 (MQ=255) caaaccacacactgtagaatccgccccactgacgcgggatggagcagcctggtagctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAACCCCGCGCTGCTTTTACACAGGCgg > 1:918064‑M1/120‑150 (MQ=255) cGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCggg < 2:1346206/150‑1 (MQ=255) tttGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGt > 2:23185/1‑150 (MQ=255) gCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGa < 1:46293/150‑1 (MQ=255) gCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGa < 2:1180256/150‑1 (MQ=255) ttGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACg > 2:593241/1‑150 (MQ=255) ttGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACg > 1:485607/1‑150 (MQ=255) ttAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGtt < 2:1203552/150‑1 (MQ=255) aaaGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGc < 1:23185/150‑1 (MQ=255) cactgacgcgggatggagcagcctggtagctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAACCCCGCGCTGCTTTTACACAGGCGGGGt > 2:1418501‑M1/94‑127 (MQ=255) cactgacgcgggatggagcagcctggtagctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAACCCCGCGCTGCTTTTACACAGGCGGGGt < 1:1418501‑M1/34‑1 (MQ=255) aaGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCg < 1:178043/150‑1 (MQ=255) aGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGTGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCgg < 1:1166508/150‑1 (MQ=255) gTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGcc < 2:877138/150‑1 (MQ=255) cATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGa < 2:273578/150‑1 (MQ=255) cTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATCCGCGCAGAAAGCCCGCGCTGCTTTTACACAGGCGGGGTTTGCTCTGACGAATATGGTTGCGGGAGCCGGATTTg > 1:957748/1‑150 (MQ=255) cTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTg > 1:332397/1‑150 (MQ=255) tGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGa > 1:440393/1‑150 (MQ=255) cGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACcgac < 1:473940/150‑1 (MQ=255) aCATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGTATTTGAACcgacga < 1:593241/150‑1 (MQ=255) tctcAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAGGCAGCAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTGGTTGGAGCCGGATTTGAACCGACGACCt > 1:715162/1‑150 (MQ=255) tcAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTc > 2:351168/1‑106 (MQ=255) tcAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTc < 1:351168/106‑1 (MQ=255) tcAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTc > 1:579439/1‑150 (MQ=255) aaGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAAc < 1:547967/137‑1 (MQ=255) aaGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAAc > 2:547967/1‑137 (MQ=255) aGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCggg < 2:332397/150‑1 (MQ=255) gTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGcc > 2:1306933/1‑150 (MQ=255) ataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAACCCCGCGCTGCTTTTACACAGGCggg < 1:300921‑M1/32‑1 (MQ=255) ataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAACCCCGCGCTGCTTTTACACAGGCggg > 2:300921‑M1/53‑84 (MQ=255) aTGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgacga < 1:259085/150‑1 (MQ=255) aTGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgacga < 1:1306933/150‑1 (MQ=255) gggaAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGtt < 1:349654/128‑1 (MQ=255) gggaAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACACCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGtt > 2:349654/1‑128 (MQ=255) aTCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTc > 1:80749/1‑150 (MQ=255) gacgaAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCcgc < 2:485607/150‑1 (MQ=255) acgaAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAata > 1:197181/1‑73 (MQ=255) acgaAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAata < 2:197181/73‑1 (MQ=255) aaGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAg < 2:957748/150‑1 (MQ=255) tCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCgg < 2:1395629/75‑1 (MQ=255) tCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCgg > 1:1395629/1‑75 (MQ=255) ggAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCg > 2:108104/1‑150 (MQ=255) tataAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGc < 1:583564/64‑1 (MQ=255) tataAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGc > 2:583564/1‑64 (MQ=255) taAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTa < 2:187995/150‑1 (MQ=255) taAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTa > 1:814776/1‑150 (MQ=255) aaGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGcc > 2:1208925/1‑100 (MQ=255) aaGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGcc < 1:1208925/100‑1 (MQ=255) aaGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGATGAATCCGGCGTCAGTGGGGCGGATTCTACa > 1:1071201/1‑150 (MQ=255) caacaaACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAgtg > 1:278508/1‑150 (MQ=255) | AAACGTATCCAATGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTG > NC_002947/1380345‑1380641 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |