| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1380493 = | 49 (0.930) | 5 (0.100) +CTGAC |
5/236 | NT | 11.2% | intergenic (‑213/+49) | PP_1202/PP_t67 | phospholipids modification protein/tRNA‑Met |
| ? | NC_002947 | 1380748 = | 34 (0.650) | intergenic (‑130/+5) | PP_t67/PP_t66 | tRNA‑Met/tRNA‑Met | |||||
CAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGCGTGTAGTTTATATGTCAAGCGCTAGGCTTTGATT > NC_002947/1380600‑1380885 | cAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGa < 2:896894/150‑1 (MQ=255) gctCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATACTTATCAGCAGGCAAAGAAAAAGGCCACTCTGTTA‑ACAGTGGCCTTTTCTTGAATCTgg < 1:933136/150‑1 (MQ=255) tCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGtt > 1:134069/1‑150 (MQ=255) ccGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGa > 1:787379/1‑150 (MQ=255) aGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGAt < 2:46054/150‑1 (MQ=255) ggCGGTTTTTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGaa < 2:1071201/150‑1 (MQ=255) cGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGTAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAAcc < 1:421724/150‑1 (MQ=255) cGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGACTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAAcc < 1:1280157/150‑1 (MQ=255) tgGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGa < 2:1083111/120‑1 (MQ=255) tgGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGa > 1:1083111/1‑120 (MQ=255) ggTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGACCTGAGGACCTTCGGGTTAt < 1:1118783/150‑1 (MQ=255) gTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCgg > 2:154405/1‑144 (MQ=255) gTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCgg < 1:154405/144‑1 (MQ=255) ttGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCCCCGGGTTA‑ACAGTGGCCTTTTCTTGAATATGGTTGCGGGTGCCGGATTTGAACCGACGACCTTCGGGGTATAAg > 1:318747/1‑150 (MQ=18) ttGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAg > 1:720168/1‑150 (MQ=255) cAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgacga < 2:1027766/150‑1 (MQ=255) gcTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTAc < 2:787379/150‑1 (MQ=255) tAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCa < 1:829326/150‑1 (MQ=255) gACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAgg < 1:1292027/136‑1 (MQ=255) gACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAgg > 2:1292027/1‑136 (MQ=255) aaTGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGa > 2:634231/1‑150 (MQ=255) ttATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGccc > 1:522688/1‑103 (MQ=255) ttATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGccc < 2:522688/103‑1 (MQ=255) ggCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGCGTGTa < 1:634231/150‑1 (MQ=255) gCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGCGTGTAg < 2:318747/150‑1 (MQ=255) accccgcctgtgtaaaagcagcgcggggtttgttctgacGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTg < 1:1418501‑M2/88‑1 (MQ=255) accccgcctgtgtaaaagcagcgcggggtttgttctgacGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTg > 2:1418501‑M2/40‑127 (MQ=255) cccgcctgtgtaaaagcagcgcggggtttgttctgacGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTAt > 2:300921‑M2/38‑84 (MQ=255) cccgcctgtgtaaaagcagcgcggggtttgttctgacGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTAt < 1:300921‑M2/47‑1 (MQ=255) aagaaaaGGCCACTGT‑TAACACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGCGTGTAGTTta > 2:1208717/4‑150 (MQ=17) ccgcctgtgtaaaagcagcgcggggtttgttctgacGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGgtttg > 1:918064‑M2/37‑149 (MQ=255) cACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGCGTGTAGTTTATATGTCAAgc > 2:824183/1‑150 (MQ=255) aCTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGa > 1:75959/1‑74 (MQ=40) cTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTa > 2:1257876/1‑124 (MQ=255) cTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTa < 1:1257876/124‑1 (MQ=255) ttA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTggg > 1:1104369/1‑109 (MQ=255) ttA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTggg < 2:1104369/109‑1 (MQ=255) a‑aCAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCgg > 1:73309/1‑38 (MQ=255) tGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGCGTGTAGTTTATATGTCAAGCGCTAGGCTTTGAtt > 2:76117/1‑150 (MQ=255) gCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTAt > 2:1290945/1‑57 (MQ=38) cTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGGGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGa > 2:1135234/1‑98 (MQ=255) cTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGGGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGa < 1:1135234/98‑1 (MQ=255) | CAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACGTTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTA‑ACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGCGTGTAGTTTATATGTCAAGCGCTAGGCTTTGATT > NC_002947/1380600‑1380885 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |