New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1635736	50 (0.950)	5 (0.110)	5/212	NT	8.8%	intergenic (+40/‑130)	era/recO	GTPase Era/DNA repair protein RecO
	?	NC_002947	= 1635806	60 (1.330)					intergenic (+110/‑60)	era/recO	GTPase Era/DNA repair protein RecO

TTCGATTCCAAGGTCATGCTCAACCTGTGGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTAATGGAACAACCTGTCGGTC  >  NC_002947/1635598‑1635884                                                                                                                                           |                                                                                                                                                     ttCGATTCCAAGGTCATGCTCAACCTGTGGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACgc                                                                                                                                           >  1:451402/1‑150 (MQ=255)    gATTCCAAGGTCATGCTCAACCTGTGGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGCCGCGATAGGGCTACgcagc                                                                                                                                        >  2:1174615/1‑150 (MQ=255)     aTTCCAAGGTCATGCTCAACCTGTGGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGTTAGGTCTACgcagca                                                                                                                                       <  2:1196575/150‑1 (MQ=255)     aTTCCAAGGTCATGCTCAACCTGTGGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACgcagca                                                                                                                                       <  1:322119/150‑1 (MQ=255)             gTCATGCTCAACCTGTGGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGc                                                                                                                               <  1:182134/150‑1 (MQ=255)                aTGCTCAACCTGTGGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGAt                                                                                                                            >  1:656083/1‑150 (MQ=255)                   cTCAACCTGTGGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGAGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTa                                                                                                                         >  1:521166/1‑150 (MQ=255)                    tCAACCTGTGGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTAt                                                                                                                        >  1:565710/1‑150 (MQ=255)                    tCAACCTGTGGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTAt                                                                                                                        <  2:64774/150‑1 (MQ=255)                      aaCCTGTGGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGAaaagggccgcaaagcggccccagatttttagc                                                                                                                      >  2:639118‑M1/1‑118 (MQ=255)                        ccTGTGGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTCTCGCTATAGGGCTACGCAGCAGCCCCGGCGATTTAtgctg                                                                                                                    <  2:984897/150‑1 (MQ=255)                          tgtgGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAggg                                                                                                                                                 >  2:643293/1‑119 (MQ=255)                          tgtgGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAggg                                                                                                                                                 <  1:643293/119‑1 (MQ=255)                          tgtgGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCCGACCCCGCGGTTTAGGCTGCg                                                                                                                  >  2:969485/1‑150 (MQ=255)                               gTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCt                                                                                                             >  2:1424104/1‑150 (MQ=255)                                tCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcat                                                                                                            >  1:830948‑M1/1‑108 (MQ=255)                                  aaGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTaaa                                                                                                          >  2:1089804/1‑150 (MQ=255)                                        aaGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTg                                                                                                    <  1:872032/150‑1 (MQ=255)                                           ggcggcTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTgggg                                                                                                 >  1:488693/1‑150 (MQ=255)                                                      cgacgacgaGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCACTGTAGGGGCGGCGTTGTGTCCCGAAAAGGCCACGCAGCAACCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTGTGCga                                                                                      >  1:323594/1‑149 (MQ=255)                                                      acacgacgaGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCgg                                                                                      >  1:410577/3‑150 (MQ=255)                                                          gacgaGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTg                                                                                                    <  2:369509/132‑1 (MQ=255)                                                          gacgaGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTg                                                                                                    >  1:369509/1‑132 (MQ=255)                                                                  cgcCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcga                                                                          <  2:830948‑M1/150‑77 (MQ=255)                                                                      cTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcgacaca                                                                      <  2:23219‑M2/150‑11 (MQ=255)                                                                       tGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaa                                                                     <  1:639118‑M1/150‑82 (MQ=255)                                                                       tGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcggcacaa                                                                     <  2:812658‑M2/150‑12 (MQ=255)                                                                        gCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcgacacaag                                                                    <  2:1097707‑M2/150‑13 (MQ=255)                                                                            tCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcgacacaaggccg                                                                <  1:107961‑M2/150‑17 (MQ=255)                                                                              gCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcgacacaa                                                                     >  2:984418‑M2/1‑132 (MQ=255)                                                                              gCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcgacacaa                                                                     <  1:984418‑M2/143‑12 (MQ=255)                                                                                 gggCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTccc                                                           >  1:596786/1‑150 (MQ=255)                                                                                   gCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcga                                                                          <  2:916998‑M2/133‑7 (MQ=255)                                                                                   gCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcga                                                                          >  1:916998‑M2/1‑127 (MQ=255)                                                                                     tACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGTGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGTATGGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACaa                                                       >  1:1143241/1‑150 (MQ=255)                                                                                        ggCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTcc                                                            <  1:423382/142‑1 (MQ=255)                                                                                        ggCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTcc                                                            >  2:423382/1‑142 (MQ=255)                                                                                        ggCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAggg                                                    >  1:464062/1‑150 (MQ=255)                                                                                        ggCGACCTGTAAGCCGCGAAATGGTCGCGGGAGTGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAggg                                                    >  2:798016/1‑150 (MQ=37)                                                                                         gCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGTAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGc                                                   <  2:451402/150‑1 (MQ=255)                                                                                          cGACCTGTAAGCCGCGCGCTGGTCCCTGTGGGAGCGGCCTTGTGTCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaaggccgcccctacagggacc                                                  <  2:721020‑M1/150‑101 (MQ=255)                                                                                          cGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGcc                                                  <  2:410577/150‑1 (MQ=255)                                                                                            aCCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAg                                                >  2:136670/1‑150 (MQ=255)                                                                                              cTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGc                                                                                        >  2:324154/1‑108 (MQ=255)                                                                                              cTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGc                                                                                        <  1:324154/108‑1 (MQ=255)                                                                                               tGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGc                                             >  1:263205/1‑150 (MQ=255)                                                                                                   aGCCGCGCGCTGTTCCCTGGAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAACATCTAGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAAcc                                         <  1:1287337/150‑1 (MQ=255)                                                                                                     ccGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCt                                       >  1:196132/1‑150 (MQ=255)                                                                                                      cgcgcgCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTc                                      >  2:1206282/1‑150 (MQ=255)                                                                                                             tGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGa                               >  2:533455/1‑150 (MQ=255)                                                                                                             tGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGAGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGa                               <  2:464062/150‑1 (MQ=255)                                                                                                              ggTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcgacacaaggccgctcccacagggaccagcgcgcggcttacaggtcg                              <  2:721020‑M2/150‑51 (MQ=255)                                                                                                               gTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcga                                                                          >  1:1404810‑M2/1‑99 (MQ=255)                                                                                                               gTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcga                                                                          <  2:1404810‑M2/105‑7 (MQ=255)                                                                                                               gTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtc                                                                              >  1:661112‑M2/1‑99 (MQ=255)                                                                                                               gTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtc                                                                              <  2:661112‑M2/101‑3 (MQ=255)                                                                                                               gTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGa                               >  1:384284/1‑148 (MQ=255)                                                                                                               gTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGa                               <  2:384284/148‑1 (MQ=255)                                                                                                                  ccTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGAt                          >  2:655570/1‑150 (MQ=255)                                                                                                                  ccTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCACGGCGCGAGTGAt                          >  1:1374492/1‑150 (MQ=255)                                                                                                                     ctAGGGGCGGCCTTGTACCGCGATAGGGCTACGCAGCGGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGCCACAAGGACGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGAtttt                       <  2:596786/149‑1 (MQ=255)                                                                                                                        ggggCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTaa                    <  2:565710/150‑1 (MQ=255)                                                                                                                          ggcggcCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTAATg                  >  2:112472/1‑150 (MQ=255)                                                                                                                            cggcCTTGTGTCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaaggccgcccctacagggaccagcgcgcggcttacaggtcgccgtagcccagcga                <  1:107961‑M1/150‑135 (MQ=255)                                                                                                                             ggcCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTAATGGaa               <  1:1097707/150‑1 (MQ=255)                                                                                                                             ggcCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTAATGGaa               <  2:263205/150‑1 (MQ=255)                                                                                                                               ccTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcgacac                                                                       <  2:967308‑M2/92‑10 (MQ=255)                                                                                                                               ccTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcgacac                                                                       >  1:967308‑M2/1‑83 (MQ=255)                                                                                                                                cTTGTGTCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaaggccgcccctacagggaccagcgcgcggcttacaggtcgccgtagcccagcgaacgc            <  2:1097707‑M1/150‑139 (MQ=255)                                                                                                                                 ttGTGTCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaaggccgcccctacagggaccagcgcgcggcttacaggtcgccgtagcccagc                  >  2:984418‑M1/1‑11 (MQ=255)                                                                                                                                 ttGTGTCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaaggccgcccctacagggaccagcgcgcggcttacaggtcgccgtagcccagc                  <  1:984418‑M1/143‑133 (MQ=255)                                                                                                                                 ttGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcgacacaaggccgcccctacagggaccagcgcgcggcttacaggtcgccgtagcccagcgaacgca           <  1:639118‑M2/150‑70 (MQ=255)                                                                                                                                 ttGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTAATGGaacaac           <  1:1206282/150‑1 (MQ=255)                                                                                                                                 ttGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTAATGGaacaac           >  1:1140882/1‑150 (MQ=255)                                                                                                                                 ttGTGCCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaaggccgcccctacagggaccagcgcgcggcttacaggtcgccgtagcccagcgaacgca           <  2:812658‑M1/150‑140 (MQ=255)                                                                                                                                  tgtgTCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaaggccgcccctacagggaccagcgcgcggcttacaggtcgccgtagcccagcgaacgcag          <  2:23219‑M1/150‑141 (MQ=255)                                                                                                                                   gtgtCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaagg                                                                   >  1:967308‑M1/1‑9 (MQ=255)                                                                                                                                   gtgtCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaagg                                                                   <  2:967308‑M1/92‑84 (MQ=255)                                                                                                                                   gtgtCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGc                                                   >  2:1109777/1‑108 (MQ=255)                                                                                                                                   gtgtCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGc                                                   <  1:1109777/108‑1 (MQ=255)                                                                                                                                     gtCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTAATGGAACAACCTGt       <  1:23219/150‑1 (MQ=255)                                                                                                                                      tCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaaggccgcccctacagggaccagcgcgcggcttacaggtcgccgtagc                       <  2:916998‑M1/133‑128 (MQ=255)                                                                                                                                      tCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaaggccgcccctacagggaccagcgcgcggcttacaggtcgccgtagc                       >  1:916998‑M1/1‑6 (MQ=255)                                                                                                                                      tCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaaggccgcccctacagggac                                                   <  2:1404810‑M1/105‑100 (MQ=255)                                                                                                                                      tCGCGAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaaggccgcccctacagggac                                                   >  1:1404810‑M1/1‑6 (MQ=255)                                                                                                                                      tCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTtcgcgacacaaggccgcccctacagggaccagcgcgcggcttacaggtcgccgtagcccagcgaacgcagggcg      <  2:830948‑M2/150‑75 (MQ=255)                                                                                                                                        gcgATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTAATGGAACAACCTGTCgg    <  1:812658/150‑1 (MQ=255)                                                                                                                                          gAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaaggccgcccctacagggac                                                   >  1:661112‑M1/1‑2 (MQ=255)                                                                                                                                          gAaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagccctatcgcgacacaaggccgcccctacagggac                                                   <  2:661112‑M1/101‑100 (MQ=255)                                                                                                                                          gATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTAATGGAACAACCTGTCGGTc  >  1:1280893/1‑150 (MQ=255)                                                                                                                                           aaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagc                                                                                    <  2:370483‑M1/67‑67 (MQ=255)                                                                                                                                           aaaagggccgcaaagcggccccagatttttagcttcgcagcataaatcgccggggctgctgcgtagc                                                                                    >  1:370483‑M1/1‑1 (MQ=255)                                                                                                                                           |                                                                                                                                                     TTCGATTCCAAGGTCATGCTCAACCTGTGGGTCAAGGTAAAGGGCGGCTGGTCCGACGACGAGCGCGCCCTGCGTTCGCTGGGCTACGGCGACCTGTAAGCCGCGCGCTGGTCCCTGTAGGGGCGGCCTTGTGTCGCGATAGGGCTACGCAGCAGCCCCGGCGATTTATGCTGCGAAGCTAAAAATCTGGGGCCGCTTTGCGGCCCTTTTCGCGACACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTAATGGAACAACCTGTCGGTC  >  NC_002947/1635598‑1635884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.