New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1666584 =61 (1.160)4 (0.080) 4/236 NT 6.0% coding (187/852 nt) PP_1460 membrane protein
?NC_002947 1666643 = 66 (1.310)coding (128/852 nt) PP_1460 membrane protein

CAGCACCAGCAGGTTTTCCACGGGTATGCGCAGGCAGGCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACA  >  NC_002947/1666435‑1666727
                                                                                                                                                     |                                                                                                                                               
cttacttgatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccaggacttatgttctcctcacccagcctcatccccaacctgatcgcagccggcctatatatagcggcggccatctaccagggctcatacctgtcc                                                                                                                                                 >  1:408672‑M1/150‑150 (MQ=255)
cagcaCCAGCAGGTTTTCCACGGGTATGCGCAGGCAGGCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGc                                                                                                                                                 >  1:798887/1‑150 (MQ=255)
   ccttgatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccaggacttatgttctcctcacccagcctcatccccaacctgatcgcagccggcctatatatagcggcggccatctaccagggctcatacctgtcCCAg                                                                                                                                              >  1:546095‑M1/147‑150 (MQ=255)
   caCCAGCAGGTTTTCCACGGGTATGCGCAGGCAGGCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAg                                                                                                                                              <  2:927117/150‑1 (MQ=255)
        gcagGTTTTCCACGGGTATGCGCAGGCAGGCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCTGCTGTAAGAACAATGCACCGTCCTGGGCCAGGACcg                                                                                                                                         >  2:1084411/1‑150 (MQ=255)
        gcagGTTTTCCACGGGTATGCGCAGGCAGGCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACcg                                                                                                                                         >  1:680687/1‑150 (MQ=255)
            gTTTTCCACGGGTATGCGCAGGCAGGCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGAt                                                                                                                                     >  2:957950/1‑150 (MQ=255)
            gTTTTCCACGGGTATGCGCAGGCAGGCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGAt                                                                                                                                     >  1:1309918/1‑150 (MQ=255)
              tttCCACGGGTATGCGCAGGCAGGCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATgg                                                                                                                                   >  1:1354306/1‑150 (MQ=255)
               ttCCACGGGTATGCGCAGGCAGGCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGc                                                                                                                                  <  1:1313463/150‑1 (MQ=255)
                   aCGGGTATGCGCAGGCAGGCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCAccc                                                                                                                              >  2:504100/1‑150 (MQ=255)
                        tATGCGCAGGCAGGCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCcagcat                                                                                                                         <  2:1138094/150‑2 (MQ=255)
                          tGCGCAGGCAGGCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGTGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGc                                                                                                                       <  1:549213/150‑1 (MQ=255)
                          aaactccgtctctttaaaggctcgccaaccaggacttatgttctcctcacccagcctcatccccaacctgatcgcagccggcctatatatagcggcggcaatctaacagggcacataccggcaCAAGGACGGCGATGGCCCCCAGCaggg                                                                                                                       <  2:662524‑M1/27‑2 (MQ=255)
                             gcaggcagGCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCaa                                                                                                                    >  2:249607/1‑150 (MQ=255)
                              caggcaggCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCTATGGCACCCAGCAGGCCAAg                                                                                                                   <  2:234825/150‑1 (MQ=255)
                                ggcaggcCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGTGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCa                                                                                                                 <  1:1045303/150‑1 (MQ=255)
                                ggcaggcCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCa                                                                                                                 <  1:137402/150‑1 (MQ=255)
                                 gcaggcCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAg                                                                                                                >  2:1410161/1‑150 (MQ=255)
                                  caggcCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTCATCAGATGGAAGCACAGCGCACCGGCCTGGCCCAGTACCCCGATGGCACCCAGCAGGCGAAGCAgg                                                                                                               <  2:590501/150‑1 (MQ=255)
                                     gcCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGgcgg                                                                                                            >  1:1189605/1‑149 (MQ=255)
                                      ccAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGGTGAAGAAGTTCAGGATCAGGCTCAACGGGGTGATCAGATGGAAGAAGAGTAGATAGGAGTGGGCAAGGACATCGATGACATGCAGCAGGACAAGCAGgcgga                                                                                                           >  2:140665/1‑148 (MQ=255)
                                         gcagGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCtttt                                                                                                        <  2:798887/150‑1 (MQ=255)
                                               tCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCt                                                                                                  >  2:1315724/1‑150 (MQ=255)
                                                    aaccaggacttatgttctcctcacccagcctcatccccaacctgatcgcagccggcctatatatagcggcggccatctaccagggctcatacctgtcCCAgg                                                                                                                                             >  1:1069934‑M1/98‑102 (MQ=255)
                                                    aaccaggacttatgttctcctcacccagcctcatccccaacctgatcgcagccggcctatatatagcggcggccatctaccagggctcatacctgtcCCAgg                                                                                                                                             <  2:1069934‑M1/5‑1 (MQ=255)
                                                      gaTGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGa                                                                                                                                      <  1:880275/107‑1 (MQ=255)
                                                      gaTGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGa                                                                                                                                      >  2:880275/1‑107 (MQ=255)
                                                         gACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTg                                                                                        >  1:30696/1‑150 (MQ=255)
                                                          gacttatgttctcctcacccagcctcatccccaacctgatcgcagccggcctatatatagcggcggccatctaccagggctcatacctgtcCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTgg                                                                                       >  1:662524‑M1/92‑150 (MQ=255)
                                                            cGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCGCCGGCCTGGGCCAGGATGGTCACTGCAACCAGCATGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGa                                                                                     <  1:1315724/150‑1 (MQ=255)
                                                            cGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGa                                                                                     >  1:1358566/1‑150 (MQ=255)
                                                                aCGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAgg                                                                                 >  1:1067581/1‑150 (MQ=255)
                                                                   gCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTAt                                                                              <  1:343526/150‑1 (MQ=255)
                                                                   gCGATCAGGCTGGCGGCGCGGCAGAAGTCCAGGCTAAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCAGCGGCCGTGGCCAGCACCGCGATGGCACCCAGTAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTAt                                                                              <  2:290858/150‑1 (MQ=255)
                                                                       tCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGc                                                                          >  2:1005767/1‑150 (MQ=255)
                                                                       ctcacccagcctcatccccaacctgatcgcagccggcctatatatagcggcggccatctaccagggctcatacctgtcc                                                                                                                                                 <  1:1262517‑M1/1‑1 (MQ=255)
                                                                       ctcacccagcctcatccccaacctgatcgcagccggcctatatatagcggcggccatctaccagggctcatacctgtcc                                                                                                                                                 >  2:1262517‑M1/79‑79 (MQ=255)
                                                                       ctcacccagcctcatccccaacctgatcgcagccggcctatatatagcggcggccatctaccagggctcatacctgtcCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTg                                                                                        <  1:1168609‑M1/58‑1 (MQ=255)
                                                                       ctcacccagcctcatccccaacctgatcgcagccggcctatatatagcggcggccatctaccagggctcatacctgtcCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTg                                                                                        >  2:1168609‑M1/79‑136 (MQ=255)
                                                                           gCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGcc                                                                                           <  1:913189/129‑1 (MQ=255)
                                                                           gCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGcc                                                                                           >  2:913189/1‑129 (MQ=255)
                                                                            cTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTgg                                                                     <  2:30696/150‑1 (MQ=255)
                                                                            cTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTgg                                                                     <  1:1084411/150‑1 (MQ=255)
                                                                            cTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTgg                                                                     <  1:437234/150‑1 (MQ=255)
                                                                                cggcgCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGa                                                                 <  2:1354306/150‑1 (MQ=255)
                                                                                    gcTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAAAAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGTCCTGGTAGATGgc                                                             >  1:1001244/1‑150 (MQ=255)
                                                                                        aagaagTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTAt                                                                              >  2:351496/1‑129 (MQ=255)
                                                                                        aagaagTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTAt                                                                              <  1:351496/129‑1 (MQ=255)
                                                                                          gaagTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGTGAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCcgccgc                                                       >  1:1182243/1‑150 (MQ=255)
                                                                                              tCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCCCCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCtata                                                   >  1:638680/1‑150 (MQ=255)
                                                                                                   gCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAg                                              <  1:1245643/150‑1 (MQ=255)
                                                                                                    cTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAgg                                             <  1:504100/150‑1 (MQ=255)
                                                                                                    cTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAgg                                             >  2:194880/1‑150 (MQ=255)
                                                                                                     tCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAGGc                                            <  1:1410161/150‑1 (MQ=255)
                                                                                                           ccAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAg                                              <  2:65266/142‑1 (MQ=255)
                                                                                                           ccAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAg                                              >  1:65266/1‑142 (MQ=255)
                                                                                                                   gTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGTTAGATGGCCGCCGCTATATATAGGCCGGCTGCGATccag                              <  2:1309918/150‑4 (MQ=255)
                                                                                                                         aGCTGGAAAAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCCATATATAGGCCGGCTGCGATCAGGTTgggg                        >  2:386875/1‑150 (MQ=255)
                                                                                                                           cTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATg                                                               >  2:893648/1‑109 (MQ=255)
                                                                                                                           cTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATg                                                               <  1:893648/109‑1 (MQ=255)
                                                                                                                             ggAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAGGCCGGCTGCGATCAGGTTGGGGATGa                    <  2:1067581/150‑1 (MQ=255)
                                                                                                                             ggAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAGGCCGGCTGCGATCAGGTTGGGGATGa                    <  1:194880/150‑1 (MQ=255)
                                                                                                                                 gaaCAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGt                                                                                >  2:1323800/1‑86 (MQ=255)
                                                                                                                                 gaaCAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGt                                                                                <  1:1323800/86‑1 (MQ=255)
                                                                                                                                  aaCAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACACAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTg               >  1:847678/1‑150 (MQ=255)
                                                                                                                                   aCAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTgg              <  1:1005767/150‑1 (MQ=255)
                                                                                                                                     aGTGCACCGGCCTGGGCCAGGACCGCGATGGCACACAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGt            <  2:847678/150‑1 (MQ=255)
                                                                                                                                      gTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTg           >  2:1289266/1‑150 (MQ=255)
                                                                                                                                          aCCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTgagga       <  2:1358566/150‑1 (MQ=255)
                                                                                                                                          aCCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAGGCCGGCTGCGATCAGGTTGGGGATGAGGATGGGTgagga       >  1:56576/1‑150 (MQ=255)
                                                                                                                                             ggCCTGGGGCAGGGCGGCGATGGCACCCAGCGGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGGGCCCTAGTAGGTGGCCGCGGGTATATGTAGGCCGGCTGCGATCAGGTTGGGGATGCGGCTGGGTGAGGAGaa    <  2:1189605/150‑1 (MQ=255)
                                                                                                                                               ccTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACa  <  2:1182243/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                               
CAGCACCAGCAGGTTTTCCACGGGTATGCGCAGGCAGGCCAGCAGGGTCAGGGAGATGACCGCCACGGCGATCAGGCTGGCGGCGCTGAAGAAGTCCAGGCTCAGGCCCAGCGGGGTGATCAGCTGGAAGAACAGTGCACCGGCCTGGGCCAGGACCGCGATGGCACCCAGCAGGCCAAGCAGGCGCTTTTCGGCCTTGCGGCCCTGGGACAGGTATGAGCCCTGGTAGATGGCCGCCGCTATATATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACA  >  NC_002947/1666435‑1666727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.