New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2436663	56 (1.070)	3 (0.060)	3/226	NT	5.1%	intergenic (+198/‑461)	PP_2134/fadB	transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase
	?	NC_002947	= 2436698	61 (1.260)					intergenic (+233/‑426)	PP_2134/fadB	transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase

TGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCG  >  NC_002947/2436516‑2436810                                                                                                                                                    |                                                                                                                                                    tGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCggcggc                                                                                                                                                   >  1:370149/1‑150 (MQ=255)   gggAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTc                                                                                                                                                 >  1:298091/1‑150 (MQ=255)              tctGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAAACCt                                                                                                                                      >  1:117805/1‑150 (MQ=255)                 ggCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGGAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGaa                                                                                                                                   >  1:796574/1‑150 (MQ=255)                                  cTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAAccc                                                                                                                                       >  1:1271018/1‑129 (MQ=255)                                  cTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAAccc                                                                                                                                       <  2:1271018/129‑1 (MQ=255)                                  cTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGt                                                                                                                  >  2:1193488/1‑150 (MQ=255)                                   tCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCaa                                                                                                                    >  1:626214/1‑147 (MQ=255)                                   tCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCaa                                                                                                                    <  2:626214/147‑1 (MQ=255)                                     gAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGTTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGaa                                                                                                                                   >  2:299127/1‑130 (MQ=255)                                     gAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGaa                                                                                                                                   <  1:299127/130‑1 (MQ=255)                                     gAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATACAGTCTGGTCAATCTGTTCTGTAACTACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTcgc                                                                                                               >  1:96142‑M2/1‑147 (MQ=255)                                           gCTGAGTGAGGCAGTTGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGacttggtaccccaccccttcagggttatgccgagccgccgcttt                                                                                                         <  2:747819‑M1/150‑45 (MQ=255)                                             tGAGAGCGGCCGATGGCGTTTTTACTGAAAACTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGTGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGc                                                                                                       >  2:877474/1‑150 (MQ=255)                                             tGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGc                                                                                                       <  1:205032/150‑1 (MQ=255)                                                     gCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTcgccgc                                                                                                            >  2:239801‑M2/1‑131 (MQ=255)                                                     gCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTcgccgc                                                                                                            <  1:239801‑M2/137‑7 (MQ=255)                                                                 tttACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAgg                                                                                   <  1:628997/150‑1 (MQ=255)                                                                      tGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTgcg                                                                                            >  2:127091/1‑136 (MQ=255)                                                                      tGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTgcg                                                                                            <  1:127091/136‑1 (MQ=255)                                                                      tGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGcc                                                                                 >  1:668897/1‑147 (MQ=255)                                                                      tGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGcc                                                                                 <  2:668897/147‑1 (MQ=255)                                                                         aaaTTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCcaggcag                                                                           <  2:370149/150‑1 (MQ=255)                                                                            tttGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTAGGTGTTCTTCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGcc                                                                        >  1:449145/1‑150 (MQ=255)                                                                             ttGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCg                                                                       <  2:389701/150‑1 (MQ=255)                                                                               gCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGTGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCggg                                                                     <  1:877474/150‑1 (MQ=255)                                                                                ccTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTAGGGTGCCAATTCGCCGCTTTTCGTTCTGCTGCGCAAAAAAGGCCGGGCAGGCCGGGt                                                                    <  2:117805/150‑1 (MQ=255)                                                                                 cTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGtt                                                                   >  1:516717/1‑150 (MQ=255)                                                                                 cTCCGGCAATAGAATCTCCTAAGGGGGCATCAAGGCTGGTGAATCTGTGCTGGAACGACAAAGCGGCGGCTCGGCATACCCCTGAAGGACTCACATGCCAAGTATTTTTACTCCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGtt                                                                   >  2:666323/1‑150 (MQ=255)                                                                                  tCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGTTGCGCAGAAAAGGCCAGGCAGGCCGGGTTa                                                                  >  2:657588/1‑150 (MQ=255)                                                                                  tCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTa                                                                  >  2:164573/1‑150 (MQ=255)                                                                                       ccATAGAATCTCCTACGGGGGGATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGGTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTattcat                                                             <  1:251584/150‑1 (MQ=255)                                                                                         aTAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGaaaa                                                                                     >  2:1352978/1‑124 (MQ=255)                                                                                         aTAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGaaaa                                                                                     <  1:1352978/124‑1 (MQ=255)                                                                                         aTAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTattcattc                                                           <  2:298091/150‑1 (MQ=255)                                                                                         aTAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTattcattc                                                           >  1:256846/1‑150 (MQ=255)                                                                                          tAGAATCTCCTATGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTcgc                                                                                                               >  1:298021‑M2/1‑94 (MQ=255)                                                                                          tAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCGAGTCGCCGCTTTGCGTTCTGCTGCGCGGAAAAGGCCAGGCAGGCCGGGTTAttcattca                                                          >  1:528422/1‑150 (MQ=255)                                                                                          tAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTcgccgcttt                                                                                                         <  2:989429‑M2/103‑10 (MQ=255)                                                                                          tAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTcgccgcttt                                                                                                         >  1:989429‑M2/1‑94 (MQ=255)                                                                                          tAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTcgc                                                                                                               <  2:298021‑M2/97‑4 (MQ=255)                                                                                                 tcCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGacttggcaccccaccccttcagggttatgccgagc                                                                                                                  <  2:55775‑M1/87‑36 (MQ=255)                                                                                                 tcCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGacttggcaccccaccccttcagggttatgccgagc                                                                                                                  >  1:55775‑M1/1‑52 (MQ=255)                                                                                                  ccTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTg                                                  >  2:1239347/1‑150 (MQ=255)                                                                                                   cTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCGAGTCGCCGCTTTGCGTTCTGCTGCGCGGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGc                                                 <  2:528422/150‑1 (MQ=255)                                                                                                   cTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGc                                                 <  2:796574/150‑1 (MQ=255)                                                                                                     aCGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCa                                               <  1:1193488/150‑1 (MQ=255)                                                                                                             aTCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTc                                       <  2:449145/150‑1 (MQ=255)                                                                                                                  ggCGGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTGGGCATAACCCTCAAGGGGTGGGCAGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCtt                                  <  2:268584/150‑1 (MQ=255)                                                                                                                    cTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTgg                                <  2:256846/150‑1 (MQ=255)                                                                                                                     tGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCca                                                                                <  1:496847/101‑1 (MQ=255)                                                                                                                     tGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCca                                                                                >  2:496847/1‑101 (MQ=255)                                                                                                                       gTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGt                                                   >  1:608517/1‑128 (MQ=255)                                                                                                                       gTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGt                                                   <  2:608517/128‑1 (MQ=255)                                                                                                                          aaTCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTg                                                  <  2:217283/126‑1 (MQ=255)                                                                                                                          aaTCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTg                                                  >  1:217283/1‑126 (MQ=255)                                                                                                                            tctgttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGTTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTcgc                        <  1:657588/150‑1 (MQ=255)                                                                                                                               gttctgtAACGACAAAGCGGCGGCTCGGTTGTACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCgcgca                     >  1:1106734/1‑150 (MQ=255)                                                                                                                                ttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCgcgcaa                    >  2:65920/1‑150 (MQ=255)                                                                                                                                ttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCgcgcaa                    <  1:164573/150‑1 (MQ=255)                                                                                                                                     tAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCcag                                                                               <  2:357088/86‑1 (MQ=255)                                                                                                                                     tAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCcag                                                                               >  1:357088/1‑86 (MQ=255)                                                                                                                                     tAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTcaa                                                         >  2:982644/1‑108 (MQ=255)                                                                                                                                     tAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTcaa                                                         <  1:982644/108‑1 (MQ=255)                                                                                                                                      aaCGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCgcgcaagcgcaa              <  1:487116/150‑1 (MQ=255)                                                                                                                                       aCGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCaaa             <  1:1239347/150‑1 (MQ=255)                                                                                                                                         gACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGTTCTTCGCGCAAGCGCAAAGc           >  1:109951/1‑150 (MQ=255)                                                                                                                                            aaaGCGGCGacttggcaccccaccccttcagggttatgccgagccgccgctttgtcgttacagaacagattgaccagcctggatgcccccgtaggagattcta                                                       <  2:989429‑M1/103‑95 (MQ=255)                                                                                                                                            aaaGCGGCGacttggcaccccaccccttcagggttatgccgagccgccgctttgtcgttacagaacagattgaccagcctggatgcccccgtaggagattcta                                                       >  1:989429‑M1/1‑9 (MQ=255)                                                                                                                                            aaaGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAAt        >  2:706827/1‑150 (MQ=255)                                                                                                                                            aaaGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTACCAAGTcgccgctttgtcgttacagaacagattgaccagcctggatgcccccgtaggagattctatggccggaggcaaattttcagtaaaaacgccaactgcctcactcagc        <  2:747819‑M2/150‑107 (MQ=255)                                                                                                                                               gcggcgacttggcaccccaccccttcagggttatgccgagccgccgctttgtcgttacagaacagattgaccagcctggatgcccccgtaggagattctatggccggaggcaaattttcagtaaaaacgccatcggc                  <  1:239801‑M1/137‑132 (MQ=255)                                                                                                                                               gcggcgacttggcaccccaccccttcagggttatgccgagccgccgctttgtcgttacagaacagattgaccagcctggatgcccccgtaggagattctatggccggaggcaaattttcagtaaaaacgccatcggc                  >  2:239801‑M1/1‑6 (MQ=255)                                                                                                                                                  gcgacttggcaccccaccccttcagggttatgccgagccgccgctttgtcgttacagaacagattgaccagcctggatgcccccgtaggagattcta                                                       <  2:298021‑M1/97‑95 (MQ=255)                                                                                                                                                  gcgacttggcaccccaccccttcagggttatgccgagccgccgctttgtcgttacagaacagattgaccagcctggatgcccccataggagattcta                                                       >  1:298021‑M1/1‑3 (MQ=255)                                                                                                                                                  gcgacttggcaccccaccccttcagggttatgccgagccgccgctttgtagttacagaacagattgaccagactgtatgcccccgtaggagattctatggccggaggcaaattttcagtaaaaacgccatcggcctctctcagcaacctc  >  1:96142‑M1/1‑3 (MQ=255)                                                                                                                                                    ggcTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTcaag                                                        >  2:1046536/1‑94 (MQ=255)                                                                                                                                                    ggcTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTcaag                                                        <  1:1046536/94‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    TGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCG  >  NC_002947/2436516‑2436810

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.