New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2526004 =50 (0.950)4 (0.080) 4/236 NT 7.9% coding (205/1194 nt) PP_2215 acetyl‑CoA acetyltransferase
?NC_002947 2526033 = 45 (0.890)coding (234/1194 nt) PP_2215 acetyl‑CoA acetyltransferase

GTTGCAGGGCGACCTCAAGAGCCTGACTGCGCCGCAACTGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATGCAAGCCGCGATCATGGCCCATGACCTGCTGCTGGCCGGCACCGCAGACGTGGTAGTGGCGGGTG  >  NC_002947/2525859‑2526151
                                                                                                                                                 |                                                                                                                                                   
gTTGCAGGGCGACCTCAAGAGCCTGACTGCGCCGCAACTGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCCGc                                                                                                                                                 >  2:288890/1‑150 (MQ=255)
      gggCGACCTCAAGAGCCTGACTGCGCCGCAACTGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCa                                                                                                                                           >  2:561187/1‑150 (MQ=255)
      gggCGACCTCAAGAGCCTGACTGCGCCGCAACTGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCa                                                                                                                                           <  2:1394590/150‑1 (MQ=255)
             cTCAAGAGCCTGACTGCGCCGCAACTGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCcgcg                                                                                                                                    >  2:762401/1‑150 (MQ=255)
                aaGAGCCTGACTGCGCCGCAACTGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTg                                                                                                                                 >  2:1137615/1‑150 (MQ=255)
                   agCCTGACTGCGCCGCAACTGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGgc                                                                                                                              <  1:1031880/150‑1 (MQ=255)
                   agCCTGACTGCGCCGCAACTGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGgc                                                                                                                              <  1:698754/150‑1 (MQ=255)
                           tGCGCCGCAACTGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCt                                                                                                                      >  1:681173/1‑150 (MQ=255)
                               ccgcAACTGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAg                                                                                                                                          <  2:1031665/126‑1 (MQ=255)
                               ccgcAACTGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAg                                                                                                                                          >  1:1031665/1‑126 (MQ=255)
                                 gcAACTGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTTTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACaa                                                                                                                <  1:451282/150‑1 (MQ=255)
                                 gcAACTGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACaa                                                                                                                <  1:561187/150‑1 (MQ=255)
                                      tGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGcaca                                                                                                           <  1:495348/150‑1 (MQ=255)
                                           aGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACaccacc                                                                                                      <  1:939471/150‑1 (MQ=255)
                                           aGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACaccacc                                                                                                      <  1:29493/150‑1 (MQ=255)
                                             cgccgcCATTCGTGGTGCCGTGGAACGCGCGGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTAGCACAGCACACCACCTg                                                                                                    <  2:1063485/150‑1 (MQ=255)
                                                cgccATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGcac                                                                                                 >  2:882719/1‑150 (MQ=255)
                                                  ccATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCTGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCAGCGCTGGACGCCGTGCTGGACAAGCACACCACCTGcacca                                                                                               >  2:308769/1‑150 (MQ=255)
                                                  ccATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGcacca                                                                                               <  1:818931/150‑1 (MQ=255)
                                                    aTTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCaccacc                                                                                             >  1:272387/1‑150 (MQ=255)
                                                    aTTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCCGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACaccacc                                                                                                      >  2:175520/1‑141 (MQ=255)
                                                    aTTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCCGCTGCGTGCTGCCGGCCGGCCACGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACaccacc                                                                                                      <  1:175520/141‑1 (MQ=255)
                                                         tgctgcCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGaa                                                                                        <  2:681173/150‑1 (MQ=255)
                                                         tgctgcCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGaa                                                                                        <  1:881486/150‑1 (MQ=255)
                                                            tgcCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCa                                                                                                                                                >  2:796972/1‑91 (MQ=255)
                                                            tgcCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCa                                                                                                                                                <  1:796972/91‑1 (MQ=255)
                                                                  gggactggCCGGCAGCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGAtgtg                                                                               <  2:154635/144‑1 (MQ=255)
                                                                  ggAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGAtgtg                                                                               <  2:1081489/150‑1 (MQ=255)
                                                                   gAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCAc                                                                                                                                               <  2:1237914/85‑1 (MQ=255)
                                                                   gAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCAc                                                                                                                                               >  1:1237914/1‑85 (MQ=255)
                                                                   gAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGc                                                                              <  2:272387/150‑1 (MQ=255)
                                                                    catgggccatgatcgcggcttgcatacccgagccgcacatcttgttcagggtggtgcaggtggtgtgcttgtccagcCCGGCACGCCAGGCCGCGCTGGGCGCCggg                                                                                                                        <  1:586938‑M1/30‑1 (MQ=255)
                                                                    catgggccatgatcgcggcttgcatacccgagccgcacatcttgttcagggtggtgcaggtggtgtgcttgtccagcCCGGCACGCCAGGCCGCGCTGGGCGCCggg                                                                                                                        >  2:586938‑M1/78‑107 (MQ=255)
                                                                              cATCGATGCCGCCGGTGTCGAGAAGGAACTGTTCGGCTGCGTGCTGCCGGCCAGCCAGGGCCAGGCACCGGCACGCCAGGCCGCACTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTAt                                                                   >  2:199552/1‑150 (MQ=255)
                                                                                  gATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATGCaa                                                               >  2:941099/1‑150 (MQ=255)
                                                                                     gcttgcatacccgagccgcacatcttgttcagggtggtgcaggtggtgtgcttgtccagcCCGGCACGCCAGGCCGCGCTGGGCGCCGGGCt                                                                                                                      >  1:1133546‑M1/61‑92 (MQ=255)
                                                                                     gcttgcatacccgagccgcacatcttgttcagggtggtgcaggtggtgtgcttgtccagcCCGGCACGCCAGGCCGCGCTGGGCGCCGGGCt                                                                                                                      <  2:1133546‑M1/32‑1 (MQ=255)
                                                                                       cgccgGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTg                                                                                                    <  2:361713/108‑1 (MQ=255)
                                                                                       cgccgGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTg                                                                                                    >  1:361713/1‑108 (MQ=255)
                                                                                        gccgGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATGCAAGCcgcg                                                         >  2:222047/1‑150 (MQ=255)
                                                                                                  aGCAGGTACTGTTCGGCTGCGTGCTACCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGCACAAGGTGTGCGGCGCGGGTATGCAAGCCGCGATCGTGGccc                                               >  1:536878/1‑150 (MQ=255)
                                                                                                             ttCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGcaca                                                                                                           >  2:149287/1‑79 (MQ=255)
                                                                                                             ttCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGcaca                                                                                                           <  1:149287/79‑1 (MQ=255)
                                                                                                             ttCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATGCAAGCCGCGATCATGGCCCATGACctgctg                                    >  2:56281/1‑150 (MQ=255)
                                                                                                                ggCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATGCAAGCCGCGATCATGGCCCATGACctgctgctg                                 >  1:508503/1‑150 (MQ=255)
                                                                                                                   tGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATGCAAGCCGCGATCATGGCCCATGACCTGCTGCTGGcc                              <  1:1137615/150‑1 (MQ=255)
                                                                                                                   tGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTACGGTATCCAAGCCGCGATCATGGCCCATGACCTGCTGCTGGcc                              >  1:537254/1‑150 (MQ=255)
                                                                                                                              ggccggccAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGa                                                                                   >  1:427697/1‑86 (MQ=255)
                                                                                                                              ggccggccAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGa                                                                                   <  2:427697/86‑1 (MQ=255)
                                                                                                                              ccggtgcctggccctggCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATg                                                                  <  2:1190150/98‑1 (MQ=255)
                                                                                                                                 cggccAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATGCAAGCCGCGATCATGGCCCATGACCTGCTGCTGGCCGGCACCGCAGACGt                <  1:308769/150‑1 (MQ=255)
                                                                                                                                 cggccAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATGCAAGCCGCGATCATGGCCCATGACCTGCTGCTGGCCGGCACCGCAGACGt                <  1:882719/150‑1 (MQ=255)
                                                                                                                                 cggccAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATGCAAGCCGCGATCATGGCCCATGACCTGCTGCTGGCCGGCACCGCAGACGt                <  1:989999/150‑1 (MQ=255)
                                                                                                                                  ggcgagggccagGCACCGGCACGCCCGGCCGCGCTGGGCGCCGGCCTGGGCAAGCACACCACCTGCACCACCCTGAACAAGATGTCCGGCTCGGGTATGCAAGCCGCGATCATGACCCATGACCTGCTGCTTGCCTGCCCCGCAGACCTg               >  2:290411/1‑150 (MQ=255)
                                                                                                                                   gccagggccaggCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATGCAAGCCGCGATCATGGCCCATGACCTGCTGCTGGCCGGCACCGCAGACGTgg              >  1:106052/1‑150 (MQ=255)
                                                                                                                                            aggCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATGCAAGCCGCGATCATGGCCCATGACCTGCTGCTGGCCGGCACCGCAGACGTGGTAGTGGCgg     >  2:65127/1‑150 (MQ=255)
                                                                                                                                              gCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATGCAAGCCGCGATCATGGCCCATGACCTGCTGCTGGCCGGCACCGCAGACGTGGTAGTGGCGGGt   >  2:123789/1‑150 (MQ=255)
                                                                                                                                               cACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATGCAAGCCGCGATCATGGCCCATGACCTGCTGCTGGCCGGCACCGCAGACGTGGTAGTGGCGGGTg  <  1:56281/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
GTTGCAGGGCGACCTCAAGAGCCTGACTGCGCCGCAACTGGGCAGCGCCGCCATTCGTGCTGCCGTGGAACGGGCCGGCATCGATGCCGCCGGTGTCGAGCAGGTACTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCACCGGCACGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGCTCGGGTATGCAAGCCGCGATCATGGCCCATGACCTGCTGCTGGCCGGCACCGCAGACGTGGTAGTGGCGGGTG  >  NC_002947/2525859‑2526151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.