| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2693123 = | 41 (0.780) | 3 (0.060) | 3/236 | NT | 6.5% | coding (178/795 nt) | PP_2361 | chaperone protein |
| ? | NC_002947 | 2693162 = | 47 (0.930) | coding (217/795 nt) | PP_2361 | chaperone protein | |||||
GGACGCGTGGATTGACTGGATTATTGTCGCTGGCAAGCCTGCCGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCGGCAGCCCGCCGGTCGCCAACATTGCACCCGGGCAGAAGCAACTGATCCGCCTGACCCGTACCGGC > NC_002947/2692983‑2693272 | taggcctgctcctggccggcgggtgaagggccggtacgggtcaggcggattagttgcttctgcccgggtgcaatgttggcgaccggcgggctgccgataatctcgcgctgcgcctggaactgctcctggtaatcaccctgGCGCCG‑GCaa < 2:1275515‑M1/10‑1 (MQ=255) aCTGGATTATTGTCGCTGGCAAGCCTGCCGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAg < 1:1083590/144‑1 (MQ=255) aCTGGATTATTGTCGCTGGCAAGCCTGCCGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAg > 2:1083590/1‑144 (MQ=255) aCTGGATTATTGTCGCTGGCAAGCCTGCCGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCAGATCGTCACCGCTCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCgg < 1:172845/150‑1 (MQ=255) tGGATTATTGTCGCTGGCAAGCCTGCCGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGt > 2:170595/1‑150 (MQ=255) tGTCGCTGGCAAGCCTGCCGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCt < 2:392400/150‑1 (MQ=255) ggtacgggtcaggcggattagttgcttctgcccgggtgcaatgttggcgaccggcgggctgccgataatctcgcgctgcgcctggaactgctcctggtaatcaccctgGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAg > 1:1275515‑M1/109‑150 (MQ=255) aaGCCTGCCGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAAc > 2:43930/1‑118 (MQ=255) aaGCCTGCCGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAAc < 1:43930/118‑1 (MQ=255) aaGCCTGCCGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGGCAggg > 2:1078348/1‑150 (MQ=255) aGCCTGCCGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGt < 1:1302773/150‑1 (MQ=255) aGCCTGCCGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGt < 2:500938/150‑1 (MQ=255) cTGCCGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGAt < 2:140290/150‑1 (MQ=255) cTGCCGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACNGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGAt < 1:829599/150‑1 (MQ=255) ccGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTAt > 2:452942/1‑127 (MQ=255) ccGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTAt < 1:452942/127‑1 (MQ=255) ggCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCa < 2:581303/150‑1 (MQ=255) gCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCat > 2:251512/1‑149 (MQ=255) gCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAg < 1:1221633/150‑1 (MQ=255) cggcCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGt > 2:718300/1‑150 (MQ=255) cggcCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGt > 2:752320/1‑150 (MQ=255) ttgcttctgcccgggtgcaatgttggcgaccggcgggctgccgataatctcgcgctgcgcctggaactgctcctggtaatcaccctgGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGt > 1:1165362‑M1/88‑132 (MQ=255) ttgcttctgcccgggtgcaatgttggcgaccggcgggctgccgataatctcgcgctgcgcctggaactgctcctggtaatcaccctgGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGt < 2:1165362‑M1/45‑1 (MQ=255) aCTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑ACAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAg < 1:410756/126‑1 (MQ=255) aCTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑ACAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAg > 2:410756/1‑126 (MQ=255) aCTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCCGGAAAACTGGAGCACTGCCCCGTGCTATTCCG‑ATGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAg < 1:1243435/150‑1 (MQ=255) cGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCg < 1:170595/150‑1 (MQ=255) gATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGGTGGAAAACCGCGGCACTGCGCCG‑GCAAACGTGCAGGTGCGGGTGTTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATCATCgg > 2:328132/1‑150 (MQ=255) aCCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCGGCAGcc > 2:171925/1‑150 (MQ=255) aCCCGGTGCTGCAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTAGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCGGCAGcc > 2:324408/1‑150 (MQ=255) cccGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCGGCAGccc > 2:1071502/1‑150 (MQ=255) cGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCGGCAGCccgc < 1:171925/150‑1 (MQ=255) ggTGCTGGAGGCCGACTAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCGGCAGCccgcc < 2:396606/150‑1 (MQ=255) gggCTGGAGTCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATCCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCGGCAGCccgccg > 2:240050/3‑150 (MQ=255) gAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCt > 2:1209098/1‑82 (MQ=255) gAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCt < 1:1209098/82‑1 (MQ=255) gAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAg < 1:528426/114‑1 (MQ=255) gAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAg > 2:528426/1‑114 (MQ=255) gACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCACCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCGGCAGCCCGCCGGTCGCCAACAtt > 2:816879/1‑150 (MQ=255) aCCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCGGCAGCCCGCCGGTCGCCAACATTg > 2:1043444/1‑150 (MQ=255) gAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATGGGCAGCCCGCCGGTCGCCAACATTGCAcc > 1:427997/1‑150 (MQ=255) aaGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGTGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCTAGATGTTCGGCCGCCCGCCGGTCGCCAACATTGCAccc > 2:311058/1‑150 (MQ=255) tGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCGGCAGCCCGCCGGTCGCCAACATTGCACCCGGGCAGaa < 1:1071502/150‑1 (MQ=255) gCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCACGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCGGCAGCCCGCCGGTCGCCAACATTGCACCCGGGCAGacg > 1:1260595/1‑148 (MQ=255) aCCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATCCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCGGCAGCCCGCCGGTCGCCAACATTGCACCCGGGCAGAAGCAACTGATCCGCCTGa < 1:240050/150‑1 (MQ=255) aCTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCGGCAGCCCGCCGGTCGCCAACATTGCACCCGGGCAGAAGCAACTGATCCGCCTGACCCGTAcc < 1:157257/150‑1 (MQ=255) tGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCgg > 2:195570/1‑87 (MQ=255) tGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCgg < 1:195570/87‑1 (MQ=255) GCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGAAGTTTAAGTGGCAGGGCGAGCTGAGCGGCAGCCCGCCGGTCGCCAACATTGCACCCGGGCAGAAGCAACTGATCCGCCTGACCCGTACCGGc > 2:404772‑M1/1‑150 (MQ=255) | GGACGCGTGGATTGACTGGATTATTGTCGCTGGCAAGCCTGCCGGCCTGGGCGGCCACTTCGGTGCTGATCTGGCCGATCGACCCGGTGCTGGAGGCCGACCAGAAGGCAGGTGCGTTGTGGCTGGAAAACCGCGGCACTGCGCCG‑GCAAACCTGCAGGTGCGGGTATTCGCCTGGCGCCAGGGTGATTACCAGGAGCAGTTCCAGGCGCAGCGCGAGATTATCGGCAGCCCGCCGGTCGCCAACATTGCACCCGGGCAGAAGCAACTGATCCGCCTGACCCGTACCGGC > NC_002947/2692983‑2693272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |