New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2957113 =	46 (0.880)	6 (0.120)	5/244	NT	11.0%	intergenic (+25/‑171)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
	?	NC_002947	2957204 =	51 (0.980)					intergenic (+116/‑80)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein

CTCGACCCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCA  >  NC_002947/2956965‑2957262                                                                                                                                                     |                                                                                                                                                      cTCGACCCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTcc                                                                                                                                                      <  1:385208/150‑1 (MQ=255)      cccTGGGCCGGATGATCATGGCCCCGGCATTGATCGCCAACCACAGCTAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCtgtg                                                                                                                                                 <  2:1084199/150‑1 (MQ=255)       ccTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGGTGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCCGCAAGGTGTAAGCCGCTGACAAGGGCAACGCCCTTCCCTATgg                                                                                                                                                >  2:41228/1‑150 (MQ=255)         tGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGa                                                                                                                                              >  2:1138341/1‑150 (MQ=255)         tGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGa                                                                                                                                              >  2:230788/1‑150 (MQ=255)             ccGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGNTGAGCAGGTGGAGAAGACCCGGATAGCCGTAGACCGAACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCgg                                                                                                                                          >  1:105891/1‑150 (MQ=255)                gatgatCATGGCCCCGGCCTTGATCGCCAACCACAGAGAGCTGGATGAGCTAGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCa                                                                                                                                       >  1:1243783/1‑150 (MQ=255)                       aTGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCcgc                                                                                                                                >  2:1166952/1‑150 (MQ=255)                       aTGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCcgc                                                                                                                                <  2:479776/150‑1 (MQ=255)                         tagaggtccgaggcgcgttgttgccagaattcgagagtgtacatttgtactccaaacgatcgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccCCCTGTGGGAGCGGGAACGCCCGCGa                                                                                                                              <  1:607361‑M1/26‑1 (MQ=255)                            cccGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAaca                                                                                                                           >  2:452294/1‑150 (MQ=255)                             ccGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAacac                                                                                                                          >  1:887570/1‑150 (MQ=255)                                     gATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAg                                                                                                                  <  2:1347459/150‑1 (MQ=255)                                       tCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGATGACAAGGGCACCACCCTTCCCTGTGTGAGCGGGCACGCCCGCGAACACCGGCGAAGcc                                                                                                                >  1:1028289/1‑150 (MQ=255)                                         gCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCgg                                                                                                              <  1:1166952/150‑1 (MQ=255)                                           cAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTg                                                                                                            >  2:1352386/1‑150 (MQ=255)                                                     gAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCg                                                                                                  <  1:1226545/150‑1 (MQ=255)                                                      aGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACCCCGGCGAAGCCGGTGCCATCCACCgt                                                                                                 <  2:590559/150‑1 (MQ=255)                                                        cTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCgtgt                                                                                               <  2:631771/150‑1 (MQ=255)                                                          ggATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCg                                                                                             >  1:177142/1‑150 (MQ=255)                                                                gCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGAGAAAGGAAAACACAGCGAATACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGAt                                                                                       >  1:805629/1‑150 (MQ=255)                                                                      ggggaagaCCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCgg                                                                                 <  1:41228/147‑1 (MQ=255)                                                                         gaagaCCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCt                                                                                                                                                    <  1:557349/80‑1 (MQ=255)                                                                         gaagaCCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCt                                                                                                                                                    >  2:557349/1‑80 (MQ=255)                                                                         gaagaCCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCggg                                                                                                                                         >  2:35489/1‑91 (MQ=255)                                                                         gaagaCCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCggg                                                                                                                                         <  1:35489/91‑1 (MQ=255)                                                                            ccaaacgaccgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGc                                                                           >  2:607361‑M1/74‑150 (MQ=255)                                                                                cGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGc                                                                       <  2:177142/150‑1 (MQ=255)                                                                                         ttAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACaga                                                              <  2:1294440/149‑1 (MQ=255)                                                                                         ttAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACaga                                                              >  1:1294440/2‑150 (MQ=255)                                                                                              ccGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAg                                                         >  1:366237/1‑150 (MQ=255)                                                                                                gCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTg                                                       >  1:432648/1‑150 (MQ=255)                                                                                                gCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTg                                                       >  1:271965/1‑150 (MQ=255)                                                                                                    ggCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTgcggc                                                   <  1:1069730/150‑1 (MQ=255)                                                                                                       gcgGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTg                                                >  2:860537/1‑150 (MQ=255)                                                                                                            tGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGc                                           <  1:368714/150‑1 (MQ=255)                                                                                                            aagtaacaggtaccacacagtccgcaagcacgccgcactccCTCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCa                                                                              <  1:1078275‑M1/74‑1 (MQ=255)                                                                                                            aagtaacaggtaccacacagtccgcaagcacgccgcactccCTCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCa                                                                              >  2:1078275‑M1/42‑115 (MQ=255)                                                                                                                 acaggtaccacacagtccgcaagcacgccgcactccCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCa                                                                              >  2:1347992‑M1/37‑110 (MQ=255)                                                                                                                 acaggtaccacacagtccgcaagcacgccgcactccCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCa                                                                              <  1:1347992‑M1/74‑1 (MQ=255)                                                                                                                    aaGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAAAACCGGCGAAGCCGCCGCTATTCGCCGTCTCCTCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtg                                   <  1:1242633/150‑1 (MQ=38)                                                                                                                    aaGCTGTAAGCCGCTGAAAAGGGCAACGCCCTTCCCTGTGGGAGCGTCCACGCCCGCGAACCCCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtg                                   <  1:660808/150‑1 (MQ=37)                                                                                                                     aGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtgt                                  <  1:506175/150‑1 (MQ=255)                                                                                                                      gCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtgtg                                 <  1:860537/150‑1 (MQ=255)                                                                                                                      gCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtgtg                                 <  1:230788/150‑1 (MQ=255)                                                                                                                          tAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTAc                             >  1:841780/1‑150 (MQ=255)                                                                                                                             gCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACagag                                                             <  2:1078983/115‑1 (MQ=255)                                                                                                                             gCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACagag                                                             >  1:1078983/1‑115 (MQ=255)                                                                                                                             gCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTg                          >  2:428993/1‑150 (MQ=255)                                                                                                                                gCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTa                       <  1:428993/150‑1 (MQ=255)                                                                                                                                      aaGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTgcg                 >  2:248115/1‑150 (MQ=255)                                                                                                                                         ggCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTgc                  <  1:279582/146‑1 (MQ=255)                                                                                                                                         ggCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTgc                  >  2:279582/1‑146 (MQ=255)                                                                                                                                               gcgcTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTgcgcca              >  2:214194/1‑142 (MQ=255)                                                                                                                                               gcgcTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCaa              <  1:214194/144‑1 (MQ=255)                                                                                                                                                 gcTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGCAGCCGGGGCCATCCACCGTGTCGCCTGATTCGAGGGCATGCCCGCTCCCACAGGGGGCCTGCGGCGTTCTCGCCGACTGGGTCGGACCTTTTCCTTGCCAAACACGGAcc      >  2:418555/1‑150 (MQ=18)                                                                                                                                                     CCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCa  >  2:432648‑M1/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CTCGACCCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCA  >  NC_002947/2956965‑2957262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.