New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2957113 = | 46 (0.880) | 6 (0.120) | 5/244 | NT | 11.0% | intergenic (+25/‑171) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein |
? | NC_002947 | 2957204 = | 51 (0.980) | intergenic (+116/‑80) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein |
CCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCACTG > NC_002947/2957058‑2957346 | ccGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAg > 1:366237/1‑150 (MQ=255) gCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTg > 1:271965/1‑150 (MQ=255) gCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTg > 1:432648/1‑150 (MQ=255) ggCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTgcggc < 1:1069730/150‑1 (MQ=255) gcgGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTg > 2:860537/1‑150 (MQ=255) tGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGc < 1:368714/150‑1 (MQ=255) aaGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAAAACCGGCGAAGCCGCCGCTATTCGCCGTCTCCTCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtg < 1:1242633/150‑1 (MQ=38) aaGCTGTAAGCCGCTGAAAAGGGCAACGCCCTTCCCTGTGGGAGCGTCCACGCCCGCGAACCCCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtg < 1:660808/150‑1 (MQ=37) aGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtgt < 1:506175/150‑1 (MQ=255) gCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtgtg < 1:230788/150‑1 (MQ=255) gCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtgtg < 1:860537/150‑1 (MQ=255) tAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTAc > 1:841780/1‑150 (MQ=255) gCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTg > 2:428993/1‑150 (MQ=255) gCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTa < 1:428993/150‑1 (MQ=255) aaGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTgcg > 2:248115/1‑150 (MQ=255) ggCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTgc > 2:279582/1‑146 (MQ=255) ggCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTgc < 1:279582/146‑1 (MQ=255) gcgcTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTgcgcca > 2:214194/1‑142 (MQ=255) gcgcTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCaa < 1:214194/144‑1 (MQ=255) gcTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGCAGCCGGGGCCATCCACCGTGTCGCCTGATTCGAGGGCATGCCCGCTCCCACAGGGGGCCTGCGGCGTTCTCGCCGACTGGGTCGGACCTTTTCCTTGCCAAACACGGAcc > 2:418555/1‑150 (MQ=18) CCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCa > 2:432648‑M1/1‑150 (MQ=255) ccTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGc < 1:115729/104‑1 (MQ=255) ccTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGc > 2:115729/1‑104 (MQ=255) gtgGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCacgac > 1:1184144/1‑150 (MQ=255) gAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTc < 1:452294/150‑1 (MQ=255) cGGGCCCGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGGGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGtt < 1:1138341/150‑1 (MQ=255) gcatgcccgcgaatcaggcgacacggtggatggcaccggcttcgccggtgttcgcgggcgtgcccgctcccacagggGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTgg > 2:607361‑M2/78‑150 (MQ=255) cACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGa < 2:1184144/150‑1 (MQ=255) cACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGa < 2:805629/150‑1 (MQ=255) tgcccgcgaatcaggcgacacggtggatggcaccggcttcgccggtgttcgcgggcgtgcccgctcccacagggGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGt > 2:1347992‑M2/75‑110 (MQ=255) tgcccgcgaatcaggcgacacggtggatggcaccggcttcgccggtgttcgcgggcgtgcccgctcccacagggGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGt < 1:1347992‑M2/36‑1 (MQ=255) tgcccgcgaatcaggcgacacggtggatggcaccggcttcgccggtgttcgcgggcgtgcccgctcccacagagGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACtt < 1:1078275‑M2/41‑1 (MQ=255) tgcccgcgaatcaggcgacacggtggatggcaccggcttcgccggtgttcgcgggcgtgcccgctcccacagagGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACtt > 2:1078275‑M2/75‑115 (MQ=255) ccGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGGGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTAcg > 1:431400/1‑149 (MQ=255) cgAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAAt < 2:887570/150‑1 (MQ=255) acacCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAATAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTa < 1:248115/150‑1 (MQ=255) cGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCGCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACtctc < 2:1028289/150‑1 (MQ=255) gAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTAc > 2:731731/1‑89 (MQ=255) gAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTAc < 1:731731/89‑1 (MQ=255) aaGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGa > 2:1300022/1‑150 (MQ=255) aGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGaa > 1:113463/1‑150 (MQ=255) ggTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCt > 1:1331954/1‑150 (MQ=255) tGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTgg > 2:808217/1‑150 (MQ=255) tGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTgg < 1:156746/150‑1 (MQ=255) aTCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACACAt < 2:1065669/127‑1 (MQ=255) aTCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAAt > 1:1065669/1‑127 (MQ=255) cACCGTGTCGCCTGATTCGCGGGCAAAAAGGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCaacaac > 1:38667/1‑150 (MQ=255) gCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTa < 1:1135994/118‑1 (MQ=255) gCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTa > 2:1135994/1‑118 (MQ=255) tcgcgggcgttcccgctcccacagggGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGATCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTa < 1:607361‑M2/124‑1 (MQ=255) tCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTa < 1:1352386/150‑1 (MQ=255) tCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTa < 2:1243783/150‑1 (MQ=255) ggCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTc < 2:366237/150‑1 (MQ=255) tCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCa < 2:841780/150‑1 (MQ=255) ccACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACtctc > 1:46928/1‑100 (MQ=255) ccACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACtctc < 2:46928/100‑1 (MQ=255) cacaGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTc < 2:78031/74‑1 (MQ=255) cacaGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTc > 1:78031/1‑74 (MQ=255) cacaGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCACTg > 2:1169563/1‑150 (MQ=255) | CCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCACTG > NC_002947/2957058‑2957346 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |