New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3217070 =	55 (1.050)	7 (0.140)	4/234	NT	11.2%	coding (2942/3129 nt)	mexD	multidrug RND transporter MexD
	?	NC_002947	3217105 =	59 (1.180)					coding (2977/3129 nt)	mexD	multidrug RND transporter MexD

CCTGGCGGCGAAGAACGCCATCCTGATCGTCGAGTTCGCCAAGGAACTGTGGGAGAAGGGCTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCTGTTTTGTCTGGGTGTTGACGTTGCTCAA  >  NC_002947/3216921‑3217211                                                                                                                                                      |                                                                                                                                              tctgcctcctcgacagcctgttgcaccggggaaggcttgcgcttgagcaacgtcaacacccagacaaaacagaccggcacgaacaccacgcccagcaaggtggcgctgagcatgccgccgatcacgccggtaccgatggcgcgctggctt                                                                                                                                               >  1:103316‑M1/150‑150 (MQ=255)   tgcctcctcgacagcctgttgcaccggggaaggcttgcgcttgagcaacgtcaacacccagacaaaacagaccggcacgaacaccacgcccagcaaggtggcgctgagcatgccgccgatcacgccggtaccgatggcgcgctggctTGc                                                                                                                                             >  2:1305056‑M1/148‑150 (MQ=255)      ctcctcgacagcctgttgcaccggggaaggcttgcgcttgagcaacgtcaacacccagacaaaacagaccggcacgaacaccacgcccagcaaggtggcgctgagcatgccgccgatcacgcaggtaccgatggcgcgctggcttgcagc                                                                                                                                          <  2:655705‑M1/6‑4 (MQ=255)         cgAAGAACGCCATCCTGATCGTCGAGTTCGCCAAGGAACTGTGGGAGAAGGGCTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTgg                                                                                                                                       <  1:1102701/150‑1 (MQ=255)                 gCCATCCTGATCGTCGAGTTCGCCAAGGAACTGTGGGAGAAGGGCTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGcc                                                                                                                               >  2:1362534/1‑150 (MQ=255)                    aTCCTGATCGTCGAGTTCGCCAAGGAACTGTGGGAGAAGGGCTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGAAGCTGGACATCGCCTcc                                                                                                                            >  2:304255/1‑150 (MQ=255)                         accggggaaggcttgcgcttgagcaacgtcaacacccagacaaaacagaccggcacgaacaccacgcccagcaaggtggcgctgagcatgccgccgatcacgccggtaccgatggcgcgctggctTGCCGCTGGCCATCGCCTCCGgcgc                                                                                                                       <  1:537446‑M1/25‑1 (MQ=255)                           tcgtcgAGTTCGCCAAGGAACTGTGGGAGAAGGGCTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCgg                                                                                                                     <  1:131724/150‑1 (MQ=255)                                    cttgcgcttgagcaacgtcaacacccagacaaaacagaccggcacgaacaccacgcccagcaaggtggcgctgagcatgccgccgatcacgccggtaccgatggcgcgctggctTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCaa                                                                                                            >  1:111717‑M1/115‑150 (MQ=255)                                    cttgcgcttgagcaacgtcaacacccagacaaaacagaccggcacgaacaccacgcccagcaaggtggcgctgagcatgccgccgatcacgccggtaccgatggcgcgctggctTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCaa                                                                                                            >  2:537446‑M1/115‑150 (MQ=255)                                      gCCAAGGAACTGTGGGAGAAGGGCTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGc                                                                                                          >  2:555343/1‑150 (MQ=255)                                        cAAGGAACTGTGGGAGAAGGGCTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCa                                                                                                        >  2:699624/1‑150 (MQ=255)                                         aaGGAACTGTGGGAGAAGGGCTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAg                                                                                                       >  2:42929/1‑150 (MQ=255)                                          aGGAACTGTGGGAGAAGGGCTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAgc                                                                                                      >  2:811783/1‑150 (MQ=255)                                            gAACTGTGGGAGAAGGGCTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAgcgc                                                                                                    <  1:699624/150‑1 (MQ=255)                                               gcaacgtcaacacccagacaaaacagaccggcacgaacaccacgcccagcaaggtggcgctgagcatgccgccgatcacgccggtaccgatggcgcgctggctTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCaa                                                                                                            <  1:769589‑M1/36‑1 (MQ=255)                                               gcaacgtcaacacccagacaaaacagaccggcacgaacaccacgcccagcaaggtggcgctgagcatgccgccgatcacgccggtaccgatggcgcgctggctTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCaa                                                                                                            >  2:769589‑M1/104‑139 (MQ=255)                                                tgtgGGAGAAGGGCTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGGGGCAGACCAGCGCGCCa                                                                                                >  2:748230/1‑150 (MQ=255)                                                  acgtcaacacccagacaaaacagaccggcacgaacaccacgcccagcaaggtggcgctgagcatgccgccgatcacgccggtaccgatggcgcgctggctTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCaa                                                                                                            <  2:110125‑M1/36‑1 (MQ=255)                                                  acgtcaacacccagacaaaacagaccggcacgaacaccacgcccagcaaggtggcgctgagcatgccgccgatcacgccggtaccgatggcgcgctggctTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCaa                                                                                                            >  1:110125‑M1/101‑136 (MQ=255)                                                   gggAGAAGGGCTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCg                                                                                             <  1:1248823/150‑1 (MQ=255)                                                      agaAGGGCTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTa                                                                                          >  1:470270/1‑150 (MQ=255)                                                       aacacccagacaaaacagaccggcacgaacaccacgcccagcaaggtggcgctgagcatgccgccgatcacgccggtaccgatggcgcgctggctTGcc                                                                                                                                            <  2:215193‑M1/4‑1 (MQ=255)                                                       aacacccagacaaaacagaccggcacgaacaccacgcccagcaaggtggcgctgagcatgccgccgatcacgccggtaccgatggcgcgctggctTGcc                                                                                                                                            >  1:215193‑M1/96‑99 (MQ=255)                                                             cTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGt                                                                                   <  2:75403/150‑1 (MQ=255)                                                             cTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGt                                                                                   <  1:304255/150‑1 (MQ=255)                                                              tACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTTCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTg                                                                                  >  1:655705/1‑150 (MQ=255)                                                                      gtgCGACGCCGCCATCGAGGCCGCGCGCATGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCa                                                                                                >  1:557830/1‑128 (MQ=255)                                                                      gtgCGACGCCGCCATCGAGGCCGCGCGCATGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCa                                                                                                <  2:557830/128‑1 (MQ=255)                                                                         cGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCAt                                                                       <  1:947347/150‑1 (MQ=255)                                                                          gACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATg                                                                      <  2:491718/150‑1 (MQ=255)                                                                             gccgccATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATcggcgg                                                                          <  1:9405/143‑1 (MQ=255)                                                                             gccgccATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATcggcgg                                                                          >  2:9405/1‑143 (MQ=255)                                                                                      gAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCAcc                                                          >  1:183909/1‑150 (MQ=255)                                                                                      gAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGAAGTATGCTCAGCGCCAcc                                                          >  1:851345/1‑150 (MQ=255)                                                                                            gcgcgcCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTg                                                    <  1:555343/150‑1 (MQ=255)                                                                                            gcgcgcCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCCCTGGCCTTCGCCTCCGGAGCGGGTGCGGCAAGCCAGCGCGCCCTAGGTCCCGGCGTGTTCGGCGGCATGCTCAGCGCCACCTTGCTg                                                    <  1:811783/150‑1 (MQ=37)                                                                                                   tGCGTTTCCGTCCGATCGTGATGTCCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCgtgg                                             <  2:294481/150‑1 (MQ=255)                                                                                                   tGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCgg                                                                                                                     >  2:1165556/1‑78 (MQ=255)                                                                                                   tGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCgg                                                                                                                     <  1:1165556/78‑1 (MQ=255)                                                                                                   tGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGTGCTGCGGCATGCTCAGCGCCACCTTGCTGGGCgtgg                                             >  2:337039/1‑150 (MQ=255)                                                                                                            gtccgATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCggcggc                                                                         <  2:1192098/113‑1 (MQ=255)                                                                                                            gtccgATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCggcggc                                                                         >  1:1192098/1‑113 (MQ=255)                                                                                                             tccgATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGcc                                   >  1:331802/1‑150 (MQ=255)                                                                                                               cgATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAgc                                                                >  1:1031781/1‑119 (MQ=255)                                                                                                               cgATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAgc                                                                <  2:1031781/119‑1 (MQ=255)                                                                                                                gATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCaa                                                                                                            >  2:1288119/1‑74 (MQ=255)                                                                                                                gATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCaa                                                                                                            <  1:1288119/74‑1 (MQ=255)                                                                                                                  tCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCt                              >  1:779175/1‑150 (MQ=255)                                                                                                                    gTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCTGt                            >  2:482869/1‑150 (MQ=255)                                                                                                                       atgaCCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTTAGCGcc                                                             >  2:1030547/1‑114 (MQ=255)                                                                                                                       atgaCCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTTAGCGcc                                                             <  1:1030547/114‑1 (MQ=255)                                                                                                                       atgaCCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCTGtttt                         <  2:779175/150‑1 (MQ=255)                                                                                                                        tgaacgccATGGAGGTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCACCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCTGTTTTg                        >  2:199377/7‑150 (MQ=38)                                                                                                                          aCCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCTGTTTTGTc                      >  2:552654/1‑150 (MQ=255)                                                                                                                             tCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCTGTTTTGTCTgg                   <  2:331802/150‑1 (MQ=255)                                                                                                                             tCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCTGTTTTGTCTgg                   <  1:482869/150‑1 (MQ=255)                                                                                                                             tCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCACCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCTGTTTTGTCTgg                   <  1:81635/150‑1 (MQ=255)                                                                                                                                     gTTCATCCTCGGCGTGGTTCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCTGTTTTGTCTGGGTGTTGAc           >  2:1128684/1‑150 (MQ=255)                                                                                                                                     gTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGt                                >  2:284427/1‑129 (MQ=255)                                                                                                                                     gTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGt                                <  1:284427/129‑1 (MQ=255)                                                                                                                                         aTCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCTGTTTTGTCTGGGTGTTGAc           >  1:994426/1‑146 (MQ=255)                                                                                                                                         aTCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCTGTTTTGTCTGGGTGTTGAc           <  2:994426/146‑1 (MQ=255)                                                                                                                                             tCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATcggcg                                                                           >  2:361167/1‑78 (MQ=255)                                                                                                                                             tCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATcggcg                                                                           <  1:361167/78‑1 (MQ=255)                                                                                                                                                gCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCTGTTTTGTCTGGGTGTTGACGTTGCTCaa  >  2:1286839/1‑148 (MQ=255)                                                                                                                                                gCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCTGTTTTGTCTGGGTGTTGACGTTGCTCaa  <  1:1286839/148‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                              CCTGGCGGCGAAGAACGCCATCCTGATCGTCGAGTTCGCCAAGGAACTGTGGGAGAAGGGCTACAGCCTGTGCGACGCCGCCATCGAGGCCGCGCGCCTGCGTTTCCGTCCGATCGTGATGACCTCCATGGCGTTCATCCTCGGCGTGGTGCCGCTGGCCATCGCCTCCGGCGCGGGTGCGGCAAGCCAGCGCGCCATCGGTACCGGCGTGATCGGCGGCATGCTCAGCGCCACCTTGCTGGGCGTGGTGTTCGTGCCGGTCTGTTTTGTCTGGGTGTTGACGTTGCTCAA  >  NC_002947/3216921‑3217211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.