New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3674020	45 (0.860)	3 (0.060)	3/234	NT	5.8%	intergenic (+134/+6)	PP_3237/PP_3238	universal stress protein family protein/transcriptional regulator PyrR
	?	NC_002947	= 3674044	54 (1.080)					coding (555/573 nt)	PP_3238	transcriptional regulator PyrR

TGGTGGTGTAGGGCTGTGCGGCTGACGACTGCAAGAACGACGAACGGGTGGCGACGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATGCCGACGATATCGGCATGCACCGGTTGGCGGCA  >  NC_002947/3673876‑3674169                                                                                                                                                 |                                                                                                                                                      tggtggTGTAGGGCTGTGCGGCTGACGACTGCAAGAACGACGAACGGGTGGCGACGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGaa                                                                                                                                                  <  1:578179/150‑1 (MQ=255) tggtggTGTAGGGCTGTGCGGCTGACGACTGCAAGAACGACGAACGGGTGGCGACGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGaa                                                                                                                                                  >  2:253361/1‑150 (MQ=255)  ggtggtGTAGGGCTGTGCGGCTGACGACTGCAAGAACGACGAACGGGTGGCGACGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAAt                                                                                                                                                 <  1:253361/150‑1 (MQ=255)      gtgtAGGGCTGTGCGGCTGACGACTGCAAGAACGACGAACGGGTGGCGACGGGTAGGCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGGACCCGGCCGTTGAATCAgg                                                                                                                                             <  2:490384/150‑1 (MQ=255)         tAGGGCTGTGCGGCTGACGACTGCAAGAACGACGAACGGGTGGCGACGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCgg                                                                                                                                          >  2:1129715/1‑150 (MQ=255)           gggCTGTGCGGCTGACGACTGCAAGAACGACGAACGGGTGGCGACGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGACAACGCCACGACCCAGGCGGTGGAAGGAGGCGGTa                                                                                                                                        >  1:313909/1‑150 (MQ=255)               tgtgCGGCTGACGACTGCAAGAACGACGAACGGGTGGCGACGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGc                                                                                                                                    <  1:31399/150‑1 (MQ=255)                     gCTGACGACTGCAAGAACGACGAACGGGTGGCGACGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTc                                                                                                                              <  1:833686‑M2/150‑2 (MQ=255)                           gacTGCAAGAACGACGAACGGGTGGCGACGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGaa                                                                                                                                                  <  2:756464/124‑1 (MQ=255)                           gacTGCAAGAACGACGAACGGGTGGCGACGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGaa                                                                                                                                                  >  1:756464/1‑124 (MQ=255)                             cTGCAAGAACGACGAACGGGTGGCGACGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGaacaggcgataccgcctgattcaacggccgggt                                                                                                                      <  1:181361‑M1/150‑34 (MQ=255)                                 aaGAACGACGAACGGGTGGCGACGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGca                                                                                                                  <  1:1129715/150‑1 (MQ=255)                                 aaGAACGACGAACGGGTGGCGACGGGTAGACAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGca                                                                                                                  >  2:1155391/1‑150 (MQ=255)                                   gAACGACGAACGGGTGGCGACGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGcacc                                                                                                                >  2:1166749/1‑150 (MQ=255)                                      cgacgaACGGGTGGCGACGGGTAGTCGGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCaccacc                                                                                                             >  1:267769/1‑150 (MQ=255)                                                      aCGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGcc                                                                                             >  2:1256869/1‑150 (MQ=255)                                                        gggTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCt                                                                                           <  2:1311760/150‑1 (MQ=255)                                                         ggTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCtt                                                                                          >  2:159790/1‑150 (MQ=255)                                                                aGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAAt                                                                                                                                                 <  2:827465/88‑1 (MQ=255)                                                                aGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAAt                                                                                                                                                 >  1:827465/1‑88 (MQ=255)                                                                aGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAggg                                                                                   <  1:855235/150‑1 (MQ=255)                                                                 gTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGaacaggcgataccgcctgattcaacggcc                                                                                                                          <  2:382967‑M1/110‑30 (MQ=255)                                                                 gTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGaacaggcgataccgcctgattcaacggcc                                                                                                                          >  1:382967‑M1/1‑81 (MQ=255)                                                                 gTGGCTCAGCACCACCCGGTGCAACGTAGCGCCTGGAGGCCTTGATTCTCAATCCTTACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCCCCTCCACGCAGAATTGCCCTTCGTAgggg                                                                                  <  1:1109019/150‑1 (MQ=255)                                                                    gCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGc                                                                               <  1:334327/150‑1 (MQ=255)                                                                     cTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGca                                                                              >  1:1374847/1‑150 (MQ=255)                                                                      tCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGcac                                                                             >  2:1057538/1‑150 (MQ=255)                                                                           accaccCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAggggg                                                                                 >  1:435795/1‑141 (MQ=255)                                                                           accaccCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAggggg                                                                                 <  2:435795/141‑1 (MQ=255)                                                                            ccaccCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCa                                                                       >  2:974392/1‑150 (MQ=255)                                                                               cccGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAggggg                                                                                 >  1:1042801/1‑137 (MQ=255)                                                                               cccGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAggggg                                                                                 <  2:1042801/137‑1 (MQ=255)                                                                                ccGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGtt                                                                                                                                                     >  1:180144/1‑68 (MQ=255)                                                                                ccGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGtt                                                                                                                                                     <  2:180144/68‑1 (MQ=255)                                                                                  ggTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCCGCAGTGCACCCTCGCTGCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTcgac                                                                 >  2:1107440/1‑150 (MQ=255)                                                                                    tGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGt                                                                                                                        <  1:190014/93‑1 (MQ=255)                                                                                    tGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGt                                                                                                                        >  2:190014/1‑93 (MQ=255)                                                                                    tGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTcgacga                                                               <  2:313909/150‑1 (MQ=255)                                                                                                         cTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTcgacg                                                                <  1:196968/128‑1 (MQ=255)                                                                                                         cTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTcgacg                                                                >  2:196968/1‑128 (MQ=255)                                                                                                         cTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCa                                          >  2:935910/1‑150 (MQ=255)                                                                                                                ctcAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAAt                                   >  1:953098/1‑150 (MQ=255)                                                                                                                 tcAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATg                                  >  2:1394296/1‑150 (MQ=255)                                                                                                                 tcAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATg                                  >  2:1051723/1‑150 (MQ=255)                                                                                                                 tcAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATg                                  >  1:354384/1‑150 (MQ=255)                                                                                                                 tcAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATg                                  >  2:289418/1‑150 (MQ=255)                                                                                                                        tGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATGCcgacga                           >  1:244719/1‑150 (MQ=255)                                                                                                                         gACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATGCCGACGat                          >  2:1388111/1‑150 (MQ=255)                                                                                                                              gaAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCCTTCGCCGATATGGGGTGCCGCGAGCTCCTGAGGAATTCCGACGATATCgg                     >  2:1084352/1‑150 (MQ=255)                                                                                                                                 ggCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATGCCGACGATATCGGCAt                  <  1:1057538/150‑1 (MQ=255)                                                                                                                                   ccccGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCGCCACCTCCACGCCGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATGCCGACGATATCGGCATGc                >  1:119316/1‑150 (MQ=255)                                                                                                                                    cccGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATGCCGACGATATCGGCATGCa               >  1:382594/1‑150 (MQ=255)                                                                                                                                     ccGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATGCCGACGATATCGGCATGCAc              >  1:1255698/1‑150 (MQ=255)                                                                                                                                       gCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATGCCGACGATATCg                      <  1:1222769/140‑1 (MQ=255)                                                                                                                                       gCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATGCCGACGATATCg                      >  2:1222769/1‑140 (MQ=255)                                                                                                                                         aCCCGGCCGTTGAATCAGGCGGTATCGCCTGTTcggccgggtgcggggccttctcgtcaggattgagaatcaaggcctccaggcgctaccttgcaccgggtggtgctgagccactgactacccgtcgccacccgttcgtcgttcttgcag          <  1:181361‑M2/150‑118 (MQ=255)                                                                                                                                             ggCCGTTGAATCAGGCGGTATCGCCTGTTcggccgggtgcggggccttctcgtcaggattgagaatcaaggcctccaggcgctaccttgcaccgggtggtgctgagccac                                              >  1:382967‑M2/1‑29 (MQ=255)                                                                                                                                             ggCCGTTGAATCAGGCGGTATCGCCTGTTcggccgggtgcggggccttctcgtcaggattgagaatcaaggcctccaggcgctaccttgcaccgggtggtgctgagccac                                              <  2:382967‑M2/110‑82 (MQ=255)                                                                                                                                             ggCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCcgcg                                                 >  1:369230/1‑107 (MQ=255)                                                                                                                                             ggCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCcgcg                                                 <  2:369230/107‑1 (MQ=255)                                                                                                                                               ccGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGGTATCCTGCGCCGCGACCTGCAGATGAATGCCGACGATATCGGCATGCACCGGTTggcgg    <  2:833686/150‑1 (MQ=255)                                                                                                                                                cGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATGCCGACGATATCGGCATGCACCGGTTggcggc   >  2:498774/1‑150 (MQ=255)                                                                                                                                                 gaacaggcgataccgcctgattcaacggccgggtgcggggccttctcgtcaggattgagaatcaaggcctccaggcgctaccttgcaccgggtggtgctgagccactgactacccgtcgccacccgttcgtcgttcttgcagtcgtcagc  <  1:833686‑M1/150‑150 (MQ=255)                                                                                                                                                 |                                                                                                                                                      TGGTGGTGTAGGGCTGTGCGGCTGACGACTGCAAGAACGACGAACGGGTGGCGACGGGTAGTCAGTGGCTCAGCACCACCCGGTGCAAGGTAGCGCCTGGAGGCCTTGATTCTCAATCCTGACGAGAAGGCCCCGCACCCGGCCGTTGAATCAGGCGGTATCGCCTGTTCGGCCGTGGCGCACCACCTCCACGCAGAATTGCCCTTCGTAGGGGGGCACATGGCATTCGACGATATCCTGCGCCGCGACCTGCAGATGAATGCCGACGATATCGGCATGCACCGGTTGGCGGCA  >  NC_002947/3673876‑3674169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.