New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3718247	61 (1.160)	6 (0.120)	6/232	NT	9.3%	coding (389/792 nt)	paaG	2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase
	?	NC_002947	= 3718253	60 (1.210)					coding (383/792 nt)	paaG	2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase

CCATTGCTCGGCCTGTTCGGCGCCAAGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCACCAGCGGGTTGTAGAACTTGTCGATCGACTGGCCC  >  NC_002947/3718099‑3718393                                                                                                                                                       |                                                                                                                                                   ccATTGCTCGGCCTGTTCGGCGCCAAGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGa                                                                                                                                                   <  2:453912/150‑1 (MQ=255)          ggCCTGTTCGGCGCCAAGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGcgac                                                                                                                                          >  1:1342429‑M2/1‑146 (MQ=255)          gatcTGTTCGGCGCCAAGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGA‑‑CCGATTCCCGTACGCGTGGGCGCAGGAGGCCTGGATGAAACTGGCCGAGCGggcggc                                                                                                                                          <  1:958386/147‑1 (MQ=255)            ccTGTTCGGCGCCACGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGcggcca                                                                                                                                        >  1:1273626‑M2/1‑144 (MQ=255)                ttCGGCGCCAAGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGcggccagatc                                                                                                                                    <  2:958386‑M2/150‑11 (MQ=255)                ttCGGCGCCAAGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGc                                                                                                                                             >  2:999432‑M2/1‑140 (MQ=255)                ttCGGCGCCAAGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGc                                                                                                                                             <  1:999432‑M2/141‑2 (MQ=255)                ttCGGCGCCAAGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCAc                                                                                                                                    <  2:1072287/150‑1 (MQ=255)                   ggCGCCAAGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAg                                                                                                                                 <  1:1059851/150‑1 (MQ=255)                       ccAAGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGcgg                                                                                                                                           >  1:29906‑M2/1‑133 (MQ=255)                       ccAAGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGcgg                                                                                                                                           <  2:29906‑M2/136‑4 (MQ=255)                        cAAGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGc                                                                                                                            >  2:1087780/1‑150 (MQ=255)                        cAAGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGc                                                                                                                            >  1:536078/1‑150 (MQ=255)                         aaGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCa                                                                                                                           <  1:492942/150‑1 (MQ=255)                           ggCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAgg                                                                                                                         >  2:103168/1‑150 (MQ=255)                              gcTCGCCCAGCATGGCCAGCGCCTTGGCCTGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCa                                                                                                                      >  1:195020/1‑150 (MQ=255)                              gcTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATGTTGCAGAACGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTTGCAGGccc                                                                                                                      >  1:283566/1‑149 (MQ=255)                               cTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGTATGAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCaa                                                                                                                     <  1:1156311/150‑1 (MQ=255)                                tCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAg                                                                                                                    >  2:1267779/1‑150 (MQ=255)                                tCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAg                                                                                                                    <  2:860822/150‑1 (MQ=255)                                 cGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GT‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAgg                                                                                                                   <  1:399909/150‑1 (MQ=255)                                    ccAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAGCTGGCCGcccgctcggccag                                                                                                                                       >  2:219211‑M1/1‑114 (MQ=255)                                    ccAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAGCTGGCCGcccgctcggccag                                                                                                                                       <  1:219211‑M1/127‑14 (MQ=255)                                       gCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGt                                                                                                             >  2:900633/1‑150 (MQ=255)                                       gCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGt                                                                                                             <  1:441504/150‑1 (MQ=255)                                             ccAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTggcac                                                                                                       >  1:746895/1‑150 (MQ=255)                                              cAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGcg                                                                                                                                            >  2:616671‑M2/1‑110 (MQ=255)                                              cAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGcg                                                                                                                                            <  1:616671‑M2/112‑3 (MQ=255)                                               aGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTggcaccg                                                                                                     <  2:184712/150‑1 (MQ=255)                                                gcgcCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTggcaccgg                                                                                                    >  1:835099/1‑150 (MQ=255)                                                     ttGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGgcaccggcaccg                                                                                               >  1:838523/1‑150 (MQ=255)                                                           cGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGgccgcc                                                                                         >  1:11298/1‑150 (MQ=255)                                                             gcccctGCCGACTAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCAc                                                                                       <  2:102020/145‑1 (MQ=255)                                                                      gACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGAc                                                                              <  2:273259/150‑1 (MQ=255)                                                                      gACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGAc                                                                              >  1:925140/1‑150 (MQ=255)                                                                         cAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACGCGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGc                                                                           <  2:474734/150‑1 (MQ=255)                                                                            gcgcGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGcaca                                                                        <  2:835099/150‑1 (MQ=255)                                                                                 gcagcaGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCa                                                                   >  1:1319824/1‑150 (MQ=255)                                                                                        ccAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGCCCGCTcggccagtttcatccaggcctt                                                                                                                        >  1:126156‑M2/1‑68 (MQ=255)                                                                                        ccAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGCCCGCTcggccagtttcatccaggcctt                                                                                                                        <  2:126156‑M2/90‑23 (MQ=255)                                                                                         cAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCaaa                                                           >  2:1024833/1‑150 (MQ=255)                                                                                         cAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCaaa                                                           <  1:1024833/150‑1 (MQ=255)                                                                                          aaGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGTGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAg                                                          >  2:947126/1‑150 (MQ=255)                                                                                           aGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAgg                                                         <  1:631188/150‑1 (MQ=255)                                                                                           aGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAgg                                                         >  2:731073/1‑150 (MQ=255)                                                                                            gTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGc                                                        <  2:389402/150‑1 (MQ=255)                                                                                               ccgccgGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGcccgctcggccagt                                                                                                                                      >  1:1296534‑M1/1‑55 (MQ=255)                                                                                               ccgccgGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGcccgctcggccagt                                                                                                                                      <  2:1296534‑M1/69‑15 (MQ=255)                                                                                               ccgccgGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAgg                                                     >  1:125879/1‑150 (MQ=255)                                                                                                cgccgGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCACGTACGAGGCCAAGGGAATGTTGGCACCGGCACTGGCCTGCGCTCCTTTGACCGCACATATCACCGGCAAAGGCAGGt                                                    >  1:1385297/1‑150 (MQ=255)                                                                                                       gTCCGGCACCAG‑GC‑AGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAg                                             <  2:895236/150‑1 (MQ=255)                                                                                                          cGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGt                                          <  2:746895/150‑1 (MQ=255)                                                                                                                cAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCAc                                    <  1:1087780/150‑1 (MQ=255)                                                                                                                 aG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTggcaccggcac                                                                                                 <  1:721895/88‑1 (MQ=255)                                                                                                                 aG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTggcaccggcac                                                                                                 <  1:722030/88‑1 (MQ=255)                                                                                                                 aG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTggcaccggcac                                                                                                 >  2:721895/1‑88 (MQ=255)                                                                                                                 aG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTggcaccggcac                                                                                                 >  2:722030/1‑88 (MQ=255)                                                                                                                    gC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGCGTGCGCACCAg                                 >  2:1369017/1‑150 (MQ=255)                                                                                                                       cGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCACCAGCg                               <  1:103168/150‑1 (MQ=255)                                                                                                                          tCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCACCAGCGGGt                            <  2:838523/150‑1 (MQ=255)                                                                                                                                aGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCACCAGCGGGTTGTAg                       >  2:207823/1‑149 (MQ=255)                                                                                                                                aGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCACCAGCGGGTTGTAg                       <  1:207823/149‑1 (MQ=255)                                                                                                                                 gAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCACCAGCGGGTTGTAGaa                     <  2:925140/150‑1 (MQ=255)                                                                                                                                  aaGGCCTGGATGAAACTGGCCGagcgggcggccagtttcatccaggccttctgcaagatcggcctggtgccggactccggcggtacttgg                                                                                >  1:126156‑M1/1‑22 (MQ=255)                                                                                                                                  aaGGCCTGGATGAAACTGGCCGagcgggcggccagtttcatccaggccttctgcaagatcggcctggtgccggactccggcggtacttgg                                                                                <  2:126156‑M1/90‑69 (MQ=255)                                                                                                                                  aaGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCACCAGCGGGTTGTAGAAc                    <  2:536078/150‑1 (MQ=255)                                                                                                                                      ccTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCACCAGCGGGTTGTAGAACTTGt                <  2:1385297/150‑1 (MQ=255)                                                                                                                                      ccTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCACCAGCGGGTTGTAGAACTTGt                <  1:900633/150‑1 (MQ=255)                                                                                                                                      ccTGGATGAAACTGCCCGACCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCACCAGCGGGTTGTAGAACTTGt                >  2:375706/1‑150 (MQ=255)                                                                                                                                       cTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAg                                                                                                                    >  2:642486/1‑49 (MQ=255)                                                                                                                                       cTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAg                                                                                                                    <  1:642486/49‑1 (MQ=255)                                                                                                                                        tGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTgc                                        <  2:512290/124‑1 (MQ=255)                                                                                                                                        tGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTgc                                        >  1:512290/1‑124 (MQ=255)                                                                                                                                            tGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGANTGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCACCAGCGGGTTGTAGAACTTGtcgatcg          >  1:644530/1‑150 (MQ=255)                                                                                                                                            tGAAACTGGCCGAGCGGGCCGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCCGACGCCACGCCGTTCACCGCACATATCCCCGTCCAAGCCAGATCCCGCAGGCTGCGCACCAGCGGGTTGTAGAACTTGtcgatcg          <  1:574996/150‑1 (MQ=255)                                                                                                                                              gatctggCCGcccgctcggccagtttcatccaggccttctgcaagatcggcctggtgccggactccggcggtacttggctgctgccgcgcttggtcggcatggcccgggccaaggcgctggccatgctgggcgagcgccttggcgccgaa        <  2:958386‑M1/147‑141 (MQ=255)                                                                                                                                              aaaCTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCACCAGCGGGTTGTAGAACTTGTCGATCGAc        <  2:1319824/150‑1 (MQ=255)                                                                                                                                                aCTGGCCGAGGGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCACCAGCGGGTTGTAGAACTTGTCGATCGACTg      >  2:55930/1‑150 (MQ=255)                                                                                                                                                aCTGGCCGAGCGGGcggccagtttcatccaggccttctgcaagatcggcctggtgccggactccggcgg                                                                                       >  1:1296534‑M2/1‑14 (MQ=255)                                                                                                                                                aCTGGCCGAGCGGGcggccagtttcatccaggccttctgcaagatcggcctggtgccggactccggcgg                                                                                       <  2:1296534‑M2/69‑56 (MQ=255)                                                                                                                                                 cTGGCCGAGCGGGcggccagcttcatccaggccttctgcaagatcggcctggtgccggactccggcggtacttggctgctgccgcgcttggtcggcatggcccgggccaaggcgctggccatgctgg                            >  2:219211‑M2/1‑13 (MQ=255)                                                                                                                                                 cTGGCCGAGCGGGcggccagcttcatccaggccttctgcaagatcggcctggtgccggactccggcggtacttggctgctgccgcgcttggtcggcatggcccgggccaaggcgctggccatgctgg                            <  1:219211‑M2/127‑115 (MQ=255)                                                                                                                                                  tGGCCGcccgctcggccagtttcatccaggccttctgcaagatcggcctggtgccggactccggcggtacttggctgctgccgcgcttggtcggcatggcccgggccaaggcgctggccatgctgggcgagcgccgtggcgccgaacagg    >  1:1273626‑M1/1‑6 (MQ=255)                                                                                                                                                  tGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGt                                          <  2:161203/112‑1 (MQ=255)                                                                                                                                                  tGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGt                                          >  1:161203/1‑112 (MQ=255)                                                                                                                                                    gtcgcccgctcggccagtttcatccaggccttctgcaagatcggcctggtgccggactccggcggtacttggctgctgccgcgcttggtcggcatggcccgggccaaggcgctggccatgctgggcgagcgccttggcgccgaacaggcc  >  1:1342429‑M1/3‑4 (MQ=255)                                                                                                                                                    gCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGCCAGCACATAGCACCGGCAAAGGCAGGGCGCGCAGGGTGCGCACCAGCGGGTTGTAGAACTTGTCGATCGACTGGccc  >  2:1046888/1‑150 (MQ=255)                                                                                                                                                     ccgcccgctcggccagtttcatccaggccttctgcaagatcggcctggtgccggactccggcggtacttggctgctgccgcgcttggtcggcatggcccgggccaaggcgctggccatgctgggcgagcgccttgg               <  2:29906‑M1/136‑134 (MQ=255)                                                                                                                                                     ccgcccgctcggccagtttcatccaggccttctgcaagatcggcctggtgccggactccggcggtacttggctgctgccgcgcttggtcggcatggcccgggccaaggcgctggccatgctgggcgagcgccttgg               >  1:29906‑M1/1‑3 (MQ=255)                                                                                                                                                      cgcccgctcggccagtttcatccaggccttctgcaagatcggcctggtgccggactccggcggtacttggctgctgccgcgcttggtcggcatggcccgggccaaggcgctg                                      <  1:616671‑M1/112‑111 (MQ=255)                                                                                                                                                      cgcccgctcggccagtttcatccaggccttctgcaagatcggcctggtgccggactccggcggtacttggctgctgccgcgcttggtcggcatggcccgggccaaggcgctg                                      >  2:616671‑M1/1‑2 (MQ=255)                                                                                                                                                       gcccgctcggccagtttcatccaggccttctgcaagatcggcctggtgccggactccggcggtacttggctgctgccgcgcttggtcggcatggcccgggccaaggcgctggccatgctgggcgagcgccttggcgccgaa        <  1:999432‑M1/141‑141 (MQ=255)                                                                                                                                                       gcccgctcggccagtttcatccaggccttctgcaagatcggcctggtgccggactccggcggtacttggctgctgccgcgcttggtcggcatggcccgggccaaggcgctggccatgctgggcgagcgccttggcgccgaa        >  2:999432‑M1/1‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                   CCATTGCTCGGCCTGTTCGGCGCCAAGGCGCTCGCCCAGCATGGCCAGCGCCTTGGCCCGGGCCATGCCGACCAAGCGCGGCAGCAGCCAAGTACCGCCGGAGTCCGGCACCAG‑GC‑CGATCTTGCAGAAGGCCTGGATGAAACTGGCCGAGCGGGCGGCCAGCACCAGGTCGCAGGCCAAGGGAATGTTGGCACCGGCACCGGCCGCCACGCCGTTGACCGCACATATCACCGGCAAAGGCAGGTCGCGCAGGGTGCGCACCAGCGGGTTGTAGAACTTGTCGATCGACTGGCCC  >  NC_002947/3718099‑3718393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.