New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3767801 =	49 (0.930)	5 (0.100)	5/238	NT	10.0%	coding (1191/1290 nt)	PP_3329	membrane protein
	?	NC_002947	3767830 =	43 (0.850)					coding (1220/1290 nt)	PP_3329	membrane protein

CTGCTGGCGGATGACCTGTTTGACGATTTTTTTGCGCCGATCAGCCGGGACGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGTGTTCAATAAGTCTCGTGCGCCTGTACCCGATTGAATATTCGTGCTTGAAAAATCACCCT  >  NC_002947/3767652‑3767950                                                                                                                                                      |                                                                                                                                                       gattctacatcttctgatgcatctgaacagggtgatttttcaagcacgaatattcaatcgggtacaggcgcacgagacttattgaacaccgatgagttcggcagcgagcgcgcggagttcgtccttgtcctgttgaagtacaagcccact                                                                                                                                                        >  1:333410‑M1/150‑150 (MQ=255)                cggTTTGACGCTTTTTTCGCGCCGATCAGCCTGGACGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCgcttgctt                                                                                                                                         <  1:314366/148‑1 (MQ=255)                       aCGATTTTTTTGCGCCGATCAGCCGGGACGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACAcg                                                                                                                                  >  2:613871/1‑150 (MQ=255)                        cGATTTTTTTGCGCCGATCAGCCGGGACGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCACATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACAcgc                                                                                                                                 <  1:701652/150‑1 (MQ=255)                         gATTTTTTTGCGCCGATCAGCCGGGACGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACAcgcg                                                                                                                                >  2:1185070/1‑150 (MQ=255)                          aTTTTTTTGCGCCGATCAGCCGGGACGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCg‑g                                                                                                                              <  2:208270/150‑1 (MQ=255)                               tttGCGCCGATCAGCCGGGACGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGt                                                                                                                         <  1:1185070/150‑1 (MQ=255)                                    gcCGATCAGCCGGGACGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACAcgcg                                                                                                                                >  1:219435/1‑139 (MQ=255)                                    gcCGATCAGCCGGGACGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACAcgcg                                                                                                                                <  2:219435/139‑1 (MQ=255)                                     ctgttCAGCCGGGACGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCtt                                                                                                                   <  1:360030/146‑1 (MQ=255)                                               gggACGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAAc                                                                                                         <  2:102550/150‑1 (MQ=255)                                                gaatattcaatcgggtacaggcgcaagcgccttattgaccacctactatttcggcagcgagcgcgcggagttcgtccttgtcctgttgaagtacaagcccacTGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACa                                                                                                        >  2:944893‑M1/103‑150 (MQ=255)                                                  aCGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGTGCTTGTACTTCAACAgg                                                                                                      <  2:730352/150‑1 (MQ=255)                                                   cGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGa                                                                                                     <  1:1330786/150‑1 (MQ=255)                                                   cGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGa                                                                                                     <  1:786334/150‑1 (MQ=255)                                                    ggCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGcttgcttg                                                                                                                                        >  2:85303/1‑115 (MQ=255)                                                    ggCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGcttgcttg                                                                                                                                        <  1:85303/115‑1 (MQ=255)                                                    ggCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGAc                                                                                                    >  1:268983/1‑150 (MQ=255)                                                          gCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGAc                                                                                              <  2:931184/150‑1 (MQ=255)                                                                cACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTc                                                                                        >  1:934333/1‑150 (MQ=255)                                                                 aCGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTTGGCGCGTACTTCAACAGTACAAGGACGAACTcc                                                                                       >  2:87066/1‑150 (MQ=255)                                                                   gAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCcgc                                                                                     >  1:1029639/1‑150 (MQ=255)                                                                   gAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCcgc                                                                                     <  2:1029639/150‑1 (MQ=255)                                                                   gAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCcgc                                                                                     <  2:926570/150‑1 (MQ=255)                                                                   gAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCcgc                                                                                     <  2:934333/150‑1 (MQ=255)                                                                          aTCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGcgctcg                                                                              >  2:1345773/1‑150 (MQ=255)                                                                           tCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGcgctcgc                                                                             >  1:1227116/1‑150 (MQ=255)                                                                             tGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTg                                                                           >  1:492870/1‑150 (MQ=255)                                                                                  ttgaacaccgatgagttcggcagcgagcgcgcggagttcgtccttgtcctgttgaagtacaagcccacTGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGc                                                                                                                     >  1:499226‑M1/69‑103 (MQ=255)                                                                                  ttgaacaccgatgagttcggcagcgagcgcgcggagttcgtccttgtcctgttgaagtacaagcccacTGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGc                                                                                                                     <  2:499226‑M1/35‑1 (MQ=255)                                                                                  ttGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGaa                                                                      >  2:894638/1‑150 (MQ=255)                                                                                    gATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACt                                                                    <  1:1312681/150‑1 (MQ=255)                                                                                      tCAAAGCCCTGGTCAGCCTGGCGCGCGTTGATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCa                                                                  >  1:1261386/1‑150 (MQ=255)                                                                                      tCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCg‑gg                                                                                                                             <  2:379487/91‑1 (MQ=255)                                                                                      tCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCg‑gg                                                                                                                             >  1:379487/1‑91 (MQ=255)                                                                                       cAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCAt                                                                 <  1:1104715/150‑1 (MQ=255)                                                                                       cAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCAt                                                                 >  2:685737/1‑150 (MQ=255)                                                                                         aaGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCg                                                               <  2:1160208/150‑1 (MQ=255)                                                                                         aaGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACACGCGTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCg                                                               <  1:87066/150‑1 (MQ=255)                                                                                             ccTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGgtgt                                                           <  1:613871/150‑1 (MQ=255)                                                                                              cTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCAt                                                                                                                                                        >  2:945382/1‑57 (MQ=255)                                                                                              cTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCAt                                                                                                                                                        <  1:945382/57‑1 (MQ=255)                                                                                                        tGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGTGTTCAATAAGtct                                                >  1:650609/1‑150 (MQ=255)                                                                                                          gcgcgcATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTTTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGTGTTCAATAAGTCTCg                                              <  1:1168274/150‑1 (MQ=255)                                                                                                          gcgcgcATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACaa                                                                                                  <  2:960164/98‑1 (MQ=255)                                                                                                          gcgcgcATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACaa                                                                                                  >  1:960164/1‑98 (MQ=255)                                                                                                               cATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGTGTTCAATAAGTCTCGTgcgc                                         <  1:685737/150‑1 (MQ=255)                                                                                                                aTCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGc                                                                                                                     >  2:1001317/1‑73 (MQ=255)                                                                                                                aTCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGc                                                                                                                     <  1:1001317/73‑1 (MQ=255)                                                                                                                      ccccGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGTGTTCAATAAGTCTCGTGCGCCTGTAcc                                  <  2:1227116/150‑1 (MQ=255)                                                                                                                        ccGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGCGTTCAATAAGTCTCGTGCGCCTGTACCCg                                >  2:1360557/1‑150 (MQ=255)                                                                                                                         cgcgCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGTGTTCAATAAGTCTCGTGCGCCTGTACCCGa                               >  2:1308281/1‑150 (MQ=255)                                                                                                                               tttCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGTGTTCAATAAGTCTCGTGCGCCTGTACCCGATTGAat                         >  1:815649/1‑150 (MQ=255)                                                                                                                                   aaCCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGCGTTCAATAAGTCTCGTGCGCCTGTACCCGATTGAATATTc                     <  1:1360557/150‑1 (MQ=255)                                                                                                                                   aaCCCGCATGACGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGTGTTCAATAAGTCTCGTGCGCCTGTACCCGATTGAATATTc                     >  2:1059792/1‑150 (MQ=255)                                                                                                                                           tacaagcccacTGCC‑CGCGTGTGCAAGCAAGCGCGCGGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGTGTTCAATAAGTCTCGTGCGCCTGTACCCGATTGAATATTCGTGCtt               >  2:1370090‑M1/12‑148 (MQ=255)                                                                                                                                           tacaagcccacTGCC‑CGCGTGTGCAAGCAAGCGCGCGGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGTGTTCAATAAGTCTCGTGCGCCTGTACCCGATTGAATATTCGTGCtt               <  1:1370090‑M1/137‑1 (MQ=255)                                                                                                                                                   gCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGaa                                                                                           <  2:140829/64‑1 (MQ=255)                                                                                                                                                   gCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGaa                                                                                           >  1:140829/1‑64 (MQ=255)                                                                                                                                                   gCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGTGTTCAATAAGTCTCGTGCGCCTGTACCCGATTGAATATTCGTGCTTGAAAAATCAc     <  2:815649/150‑1 (MQ=255)                                                                                                                                                      TGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGTGTTCAATAAGTCTCGTGCGCCTGTACCCGATTGAATATTCGTGCTTGAAAAATCACCCt  <  2:1310882‑M1/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                       CTGCTGGCGGATGACCTGTTTGACGATTTTTTTGCGCCGATCAGCCGGGACGGCGCGGCTTTGCACGAGGTCAATCTGCGCTTGATCAAAGCCCTGGTCAGCCTGGCGCGCATCAATCCCCGCGCATTTCAACCCGCCTGCAGCCGGCATGCCGCGCGCTTGCTTGCACACGCG‑GGCAGTGGGCTTGTACTTCAACAGGACAAGGACGAACTCCGCGCGCTCGCTGCCGAACTCATCGGTGTTCAATAAGTCTCGTGCGCCTGTACCCGATTGAATATTCGTGCTTGAAAAATCACCCT  >  NC_002947/3767652‑3767950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.