New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4084298	60 (1.140)	5 (0.100)	5/232	NT	8.0%	coding (396/720 nt)	PP_3594	amino acid ABC transporter permease
	?	NC_002947	= 4084322	58 (1.170)					coding (420/720 nt)	PP_3594	amino acid ABC transporter permease

CAGATCGCCGCGCAGAAGATCCTCGCCGCCATGGGCTACCAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCTGTCGCTGCTCAAGGACACCTCGCTGGTGTCGACCA  >  NC_002947/4084149‑4084446                                                                                                                                                      |                                                                                                                                                     cAGATCGCCGGGAAGAAGATCATCGCTTCGACGTGCCACCAAGGGGAGTTCCTCATCAACTCGTTCCTCGCCGCGATGATCGCCTTCAGCCTGATGTTCGTCGCGTTTGCCAGCGAGATCTGGCTAGCAGCCTTCAAGACCCTGCCCAAg                                                                                                                                                      <  2:686309/150‑1 (MQ=255)  aGATCGCCGCGCAGAAGATCCTCGCCGCCATGGGCTACCAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAgg                                                                                                                                                     <  1:761283/150‑1 (MQ=255)        ccgcGCAGAAGATCCTCGCCGCCATGGGCTACCAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCACGACCCTCCCCAAGGCCCAGc                                                                                                                                               >  2:1359878/1‑150 (MQ=255)         cgcgCAGAAGATCCTCGCCGCCATGGGCTACCAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCt                                                                                                                                              <  2:455161/150‑1 (MQ=255)             cAGAAGATCCTCGCCGCCATGGGCTACCAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGaa                                                                                                                                          <  1:1392469/150‑1 (MQ=255)              agaagaTCCTCGCCGCCATGGGCTACCAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAg                                                                                                                                         >  1:683153/1‑150 (MQ=255)              agaagaTCCTCGCCGCCATGGGCTACCAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAg                                                                                                                                         >  2:1101806/1‑150 (MQ=255)                 agaTCCTCTCCGCCATGGGCTACCAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCTAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCt                                                                                                                                      <  1:237543/150‑1 (MQ=255)                           cgccATGGGCTACCAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGct                                                                                                                            <  1:1285543‑M2/150‑3 (MQ=255)                            gccATGGGCTACCAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGctt                                                                                                                           >  2:1285543‑M2/1‑147 (MQ=255)                             ccATGGGCTACCAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGcttg                                                                                                                          <  2:395643‑M2/150‑5 (MQ=255)                                     tACCAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAg                                                                                                                   <  2:462684/149‑1 (MQ=255)                                     tACCAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAg                                                                                                                   >  1:462684/1‑149 (MQ=255)                                        cAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGcgccgagcaggcttccagctggcccttgggcagggtctt                                                                                                               <  1:1353969‑M1/150‑40 (MQ=255)                                        cAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAg                                                                                                               <  2:1041569/150‑1 (MQ=255)                                         aaGGTGAGTTCCTCATCAACACCTTCCTCTCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAgc                                                                                                              >  1:41218/1‑150 (MQ=255)                                           ggTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAgcgc                                                                                                            <  2:98221/150‑1 (MQ=255)                                                 ttCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGt                                                                                                      >  1:972222/1‑150 (MQ=255)                                                 ttCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGt                                                                                                      >  1:458548/1‑150 (MQ=255)                                                     tcatcaACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAATCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTttct                                                                                                  >  1:154530/1‑150 (MQ=255)                                                       atcaACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCTCGTTTTCCAGCGAGATCTGGCTGGCAGCCCTCAAGCCCCTCCAGAACCACCCGCTGTAAGCCTGCTGGGCGCTTGGGCTTACTAAGCGCACCGGGtgcttc                                                                                                >  2:1378319/1‑150 (MQ=255)                                                        tcaACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCa                                                                                               >  2:328290/1‑150 (MQ=255)                                                          aacttcTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGTGTTTTTCAGCGATTTCATTCTGGTAGCCTTCAAGACCCTGACCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAg                                                                                             <  1:169229/145‑1 (MQ=255)                                                          aaCACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAg                                                                                             <  1:144045/150‑1 (MQ=255)                                                            cacCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGt                                                                                           >  2:132739/1‑150 (MQ=255)                                                                    tCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGtgctgctgc                                                                                   >  1:1390664/1‑150 (MQ=255)                                                                    tCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGtgctgctgc                                                                                   <  1:132739/150‑1 (MQ=255)                                                                    tCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTACAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTa                                                                                                                    >  1:693443/1‑117 (MQ=255)                                                                    tCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTACAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTa                                                                                                                    <  2:693443/117‑1 (MQ=255)                                                                      gccgcGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTAGGCGCTTGGGATTAGAAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCca                                                                                 <  1:1101806/150‑1 (MQ=255)                                                                           gatgatCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGtgctg                                                                                       >  2:638957/1‑139 (MQ=255)                                                                           gatgatCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGtgctg                                                                                       <  1:638957/139‑1 (MQ=255)                                                                              gatCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCACGAAGGAAACGCGTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGAc                                                                         >  2:38301/1‑150 (MQ=255)                                                                                tCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGt                                                                                                      <  1:682434/119‑1 (MQ=255)                                                                                tCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGt                                                                                                      >  2:682434/1‑119 (MQ=255)                                                                                tCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGTTGCTGCTGCCACAACTGAccc                                                                       <  2:640544/150‑1 (MQ=255)                                                                                tCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGAccc                                                                       >  2:566287/1‑150 (MQ=255)                                                                                  gCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGc                                                                     <  2:1270452/150‑1 (MQ=255)                                                                                    cTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGcgccgagcaggcttccagctggcccttgggcagggtcttgaagg                                                                                                          <  2:257715‑M1/111‑45 (MQ=255)                                                                                    cTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGcgccgagcaggcttccagctggcccttgggcagggtcttgaagg                                                                                                          >  1:257715‑M1/1‑67 (MQ=255)                                                                                     ttCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATc                                                                  >  2:571362/1‑150 (MQ=255)                                                                                        aGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGcc                                                               <  2:458548/150‑1 (MQ=255)                                                                                                    gccgcGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGcttg                                                                                                                          >  2:1320627‑M2/1‑75 (MQ=255)                                                                                                    gccgcGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGcttg                                                                                                                          <  1:1320627‑M2/79‑5 (MQ=255)                                                                                                    gccgcGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCCTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTg                                                   >  2:810748/1‑150 (MQ=255)                                                                                                      cgcgTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCTAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTc                                                 >  2:795188/1‑150 (MQ=255)                                                                                                      cgcgTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTc                                                 <  1:566287/150‑1 (MQ=255)                                                                                                       gcgTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTcc                                                >  2:351251/1‑150 (MQ=255)                                                                                                          ttttCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGc                                                      >  1:180576/1‑141 (MQ=255)                                                                                                          ttttCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGc                                                      <  2:180576/141‑1 (MQ=255)                                                                                                            ttCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCcaacaa                                           >  2:1286897/1‑150 (MQ=255)                                                                                                             tCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCaacaac                                          <  2:41218/150‑1 (MQ=255)                                                                                                             tCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGATCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCaacaac                                          <  1:1378319/150‑1 (MQ=255)                                                                                                              ccAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACt                                         <  2:1390664/150‑1 (MQ=255)                                                                                                               cAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTg                                        >  2:1322434/1‑150 (MQ=255)                                                                                                                aGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGcgccgagcaggcttccagctggccctt                                                                                                                           >  1:279965‑M1/1‑39 (MQ=255)                                                                                                                aGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGcgccgagcaggcttccagctggccctt                                                                                                                           <  2:279965‑M1/66‑28 (MQ=255)                                                                                                                  cGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCAGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCt                                     <  1:865629/150‑1 (MQ=255)                                                                                                                    agaTCTGGCTGGCAGCCTTCTAGACACTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGCGCTGCCGCCACCACTGACCCCCATCGCCCTGCACGTCGTGTCCAACAACTTGCTGt                                   <  2:447635/150‑1 (MQ=255)                                                                                                                             tggcAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCTGTCGCTGCTCa                          >  2:1022807/1‑150 (MQ=255)                                                                                                                              ggcAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCTGTCGCTGCTCaa                         <  1:1322434/150‑1 (MQ=255)                                                                                                                               cgatctttCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCGCGGCTTGTCCAACAACTGGCTGTCGCTGCTCAAg                        <  1:337317/144‑1 (MQ=255)                                                                                                                                 aGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCTGTCGCTGCTCAAGGa                      <  1:1286897/150‑1 (MQ=255)                                                                                                                                 aGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCTGTCGCTGCTCAAGGa                      >  1:656433/1‑150 (MQ=255)                                                                                                                                  gCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCTGTCGCTGCTCAAGGac                     <  1:1022807/150‑1 (MQ=255)                                                                                                                                  gCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCTGTCGCTGCTCAAGGac                     >  2:1161159/1‑150 (MQ=255)                                                                                                                                   ccTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGcttgggcagggtcttgaaggctgccagccagatctcgctggaaaacgcggcgaacaccaggctgaag                                                           >  1:257715‑M2/1‑44 (MQ=255)                                                                                                                                   ccTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGcttgggcagggtcttgaaggctgccagccagatctcgctggaaaacgcggcgaacaccaggctgaag                                                           <  2:257715‑M2/111‑68 (MQ=255)                                                                                                                                    cTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACACCTGGCTGTCGCTGCTCAAGGacac                   <  1:328290/150‑1 (MQ=255)                                                                                                                                      tCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCACGGCCTGTCCAACAACTGGCTGTCGCTGCCCAAggggatcg                 >  2:337317/1‑144 (MQ=255)                                                                                                                                        aaGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGcttgggcagggtcttgaaggctgccagccagatctcgctggaaaacgcggcgaacaccaggctgaaggcgatcatcgcggcgaggaaggtgttgatgaggaactcaccttg               <  1:1353969‑M2/150‑112 (MQ=255)                                                                                                                                           aCCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCTGTCGCTGCTCAAGGACACCTCGCTg            <  2:683153/150‑1 (MQ=255)                                                                                                                                             ccTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCTGTCGCTGCTCAAGGacac                   <  2:90629/141‑1 (MQ=255)                                                                                                                                             ccTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCTGTCGCTGCTCAAGGacac                   >  1:90629/1‑141 (MQ=255)                                                                                                                                             ccTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCTGTCGCTGCTCAAGGACACCTCGCTGgt          >  2:1427403/1‑150 (MQ=255)                                                                                                                                                  ccAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAAc                                                                             >  1:307842/1‑78 (MQ=255)                                                                                                                                                  ccAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAAc                                                                             <  2:307842/78‑1 (MQ=255)                                                                                                                                                  ccAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCTGTCGCTGCTCAAGGACACCTCGCTGGGGTCGa     >  2:1229111/1‑150 (MQ=255)                                                                                                                                                   cAAGcgccgagcaggcttccagctggcccttgggcagggtcttgaaggctgccagccagatctcgctggaaaacgcggcgaacaccaggctgaaggcgatcatcgcggcgaggaaggtgttgatgaggaactcaccttggtagcccatgg    <  2:395643‑M1/150‑147 (MQ=255)                                                                                                                                                   cAAGcgccgagcaggcttccagctggcccttgggcagggtcttgaaggctgccagccagatctcgctggaaaacgcggc                                                                           >  2:1320627‑M1/1‑4 (MQ=255)                                                                                                                                                   cAAGcgccgagcaggcttccagctggcccttgggcagggtcttgaaggctgccagccagatctcgctggaaaacgcggc                                                                           <  1:1320627‑M1/79‑76 (MQ=255)                                                                                                                                                   cAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCTGTCGCTGCTCAAGGACACCTCGCTGGTGTCGAc    >  2:326298/1‑150 (MQ=255)                                                                                                                                                    aaGcgccgagcaggcttccagctggcccttgggcagggtcttgaaggctgccagccagatctcgctggaaaacgcggcgaacaccaggctgaaggcgatcatcgcggcgaggaaggtgttgatgaggaactcaccttggtagcccatggc   >  2:1285543‑M1/1‑3 (MQ=255)                                                                                                                                                    aaGGGCCAGCTGGAAGCCTGCTCGGCGcttgggcagggtcttgaaggctgccagccagatctcgct                                                                                       >  1:279965‑M2/1‑27 (MQ=255)                                                                                                                                                    aaGGGCCAGCTGGAAGCCTGCTCGGCGcttgggcagggtcttgaaggctgccagccagatctcgct                                                                                       <  2:279965‑M2/66‑40 (MQ=255)                                                                                                                                                     aGcgccgagcaggcttccagctggcccttgggcagggtcttgaaggctgccagccagatctcgctggaaaacgcggcgaacaccaggctgaaggcgatcatcgcggcgaggaaggtgttgatgaggaactcaccttggtagcccatggcg  <  1:1285543‑M1/150‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CAGATCGCCGCGCAGAAGATCCTCGCCGCCATGGGCTACCAAGGTGAGTTCCTCATCAACACCTTCCTCGCCGCGATGATCGCCTTCAGCCTGGTGTTCGCCGCGTTTTCCAGCGAGATCTGGCTGGCAGCCTTCAAGACCCTGCCCAAGGGCCAGCTGGAAGCCTGCTCGGCGCTTGGGCTTAGCAAGCGCACCGGTTTCTTCAAGGTGCTGCTGCCACAACTGACCCGCATCGCCCTGCCCGGCTTGTCCAACAACTGGCTGTCGCTGCTCAAGGACACCTCGCTGGTGTCGACCA  >  NC_002947/4084149‑4084446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.