New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4268676 | 46 (0.880) | 3 (0.060) | 3/234 | NT | 7.1% | coding (669/1341 nt) | PP_3740 | MFS transporter |
? | NC_002947 | = 4268725 | 35 (0.700) | coding (620/1341 nt) | PP_3740 | MFS transporter |
ATCACGAAGTAGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATAC > NC_002947/4268527‑4268819 | atcaCGAAGTAGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGC > 1:1387817‑M1/1‑150 (MQ=255) caCGAAGTAGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTg > 2:146874/1‑150 (MQ=255) cGAAGTAGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGc > 2:106456/1‑150 (MQ=255) aGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTg < 2:122728/142‑1 (MQ=255) aGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTg > 1:122728/1‑142 (MQ=255) ccAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGt > 1:846743/1‑150 (MQ=255) cAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGtt < 2:1387817/150‑1 (MQ=255) cAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGtt > 2:1406613/1‑150 (MQ=255) gaagaaCAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCAGTTGAc < 2:1236131/150‑1 (MQ=255) aagaaCAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGAcc < 1:146874/150‑1 (MQ=255) gaaCAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGAccc < 2:22273/149‑1 (MQ=255) gaaCAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGAccc > 1:22273/1‑149 (MQ=255) aaCAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCgg < 2:1295189/150‑1 (MQ=255) aaCAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCgg < 1:862505/150‑1 (MQ=255) aaCAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCgg > 1:1078026/1‑150 (MQ=255) cAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCGGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGc < 1:1326624/150‑1 (MQ=255) cAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGc < 2:846743/150‑1 (MQ=255) cAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGc < 1:1406613/150‑1 (MQ=255) aGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGcc > 1:265822/1‑150 (MQ=255) cAGCTCACCAGCTTGGTGCGGCGCATGGCCGGGGCCAGCAGCGGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCTCCAATGCCGGCTGGCCAAGGCGCACGGCCGGGCGGTTGACCCGGGCCAGAGCa < 2:219219/150‑1 (MQ=255) gATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGtt < 1:181471/132‑1 (MQ=255) gATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGtt > 2:181471/1‑132 (MQ=255) aTCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCcggccaatgctctggcccgggtcaaccgcctggccgtgcgccttg < 1:283922‑M1/150‑46 (MQ=255) tCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCcggccaatgctctggcccgggtcaaccgcctggccgtgcgccttgg < 2:1092897‑M1/150‑47 (MQ=255) cACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTCATGCCGGTTTTGGCACCCTCTCCCCTTGCTCCAACAGCCGCTAGTTGCGTCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCCGTTGACCCGGGCCAGAGCCTTgtc < 2:446566/150‑3 (MQ=255) aCCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTggcc > 2:1297611/1‑150 (MQ=255) tggtgCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGgccggc > 2:1051785‑M2/1‑144 (MQ=255) gcggcgCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCcggccaatgctctggcccgggtcaaccgcctggccgtgcgccttggccagccggcattg < 1:1067805‑M1/150‑60 (MQ=255) cggcgCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGcc < 1:106456/150‑1 (MQ=255) ggCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCagag < 1:835516/122‑1 (MQ=255) ggCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCagag > 2:835516/1‑122 (MQ=255) gCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAg < 2:1078026/150‑1 (MQ=255) agcagcTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGAc > 1:1396140/1‑150 (MQ=255) ccTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCaa < 2:265822/150‑1 (MQ=255) cccGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCAcag > 1:1392132/1‑150 (MQ=255) cGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGACCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCAcagca < 1:1297611/150‑1 (MQ=255) aCCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGc > 2:964903/1‑63 (MQ=255) aCCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGc < 1:964903/63‑1 (MQ=255) aCCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCACAGCAGTACCAGCgg > 2:1038013/1‑150 (MQ=255) ctctGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCACAGCAGTACCAGCGGGAt < 2:1396140/150‑1 (MQ=255) tctGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGcc > 2:266495/1‑102 (MQ=255) tctGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGcc < 1:266495/102‑1 (MQ=255) tctGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCACAGCAGTACCAGCGGGATc < 1:1038013/150‑1 (MQ=255) tGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCACAGCAGTACCAGCGGGATCAc < 2:1392132/150‑1 (MQ=255) cTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCACAGCAGTACCAGCGGGATCACCAGt > 2:1219327/1‑150 (MQ=255) ttGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCACAGCAGTACCAGCGGGATCACCAGTa > 2:69468/1‑150 (MQ=255) aaCAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTgac > 2:281880/1‑150 (MQ=255) ccGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑CGGCCGTTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGAcgc > 1:1021491/1‑150 (MQ=255) ggTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGAcgccg > 1:165970/1‑150 (MQ=255) gTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGAcgccgc > 1:553066/1‑150 (MQ=255) tAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCACCCCGTTCTGG‑AAGCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACgccgcc > 2:38012/1‑150 (MQ=255) tAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACgccgcc < 2:553066/150‑1 (MQ=255) tGCGCCAATGCCGGCTGGCCAAGGCTCAAGGACAGGCAGTAGCCGCGGGCCAGAGCACTGGCCGCCTGGAGTGCCAGCAGAAAGGCCA‑CCGACTCTGGCAACCACAGCAGTAACAGCGGGCTCCCCAGTCCGGTGACGACGCCGCCAAAc < 2:433899/150‑1 (MQ=255) gcgcCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACa > 1:1077990/1‑150 (MQ=255) cAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGgccggcattggcgcaactaccggctgttgccgcaagggcagagggtgccaaaaccgggttcaggcagctgctggcgccggccatgcgccgc < 1:1067805‑M2/150‑92 (MQ=255) tGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATAc < 1:69468/150‑1 (MQ=255) gccggccggccaatgctctggcccgggtcaaccgcctggccgtgcgccttggccagccggcattggcgcaactaccggctgttgccgcaagggcagagggtgccaaaaccgggttcaggcagctgctggcgccggccatgcgccgcacca > 2:1051785‑M1/1‑6 (MQ=255) | ATCACGAAGTAGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCA‑GCGACTCTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATAC > NC_002947/4268527‑4268819 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |