New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4537557 = | NA (NA) | 10 (0.200) | 8/240 | NT | 91.1% | coding (848/1533 nt) | PP_4025 | transposase |
? | NC_002947 | 4537590 = | 1 (0.020) | coding (881/1533 nt) | PP_4025 | transposase |
GCTCAAAGAGCCGGATCGTGATCCGACCAGTCAATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTA > NC_002947/4537459‑4537608 | gcccAAAGAGTCGCATCGTGATCCCTCCAGTCAATCCTGCATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTCCTCGCTTACACCACCAGCCGCGCGCAGGATGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTa < 1:158285/147‑1 (MQ=1) | GCTCAAAGAGCCGGATCGTGATCCGACCAGTCAATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTA > NC_002947/4537459‑4537608 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |