| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4537557 = | NA (NA) | 10 (0.200) | 8/240 | NT | 91.1% | coding (848/1533 nt) | PP_4025 | transposase |
| ? | NC_002947 | 4537590 = | 1 (0.020) | coding (881/1533 nt) | PP_4025 | transposase | |||||
TGAAACTCGCGTGCAGGTGCTCAAAGAGCCGGATCGTGATCCGACCAGTCAATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAGCCTAAGGGCAAGAGCG > NC_002947/4537441‑4537739 | gacgaatttacgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagcgctccagcaggcgcagcggcacctcctgcgcgcggctggt > 1:785907‑M2/150‑150 (MQ=255)gacgaatttacgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggt < 2:750845‑M2/1‑1 (MQ=255)gacgaatttacgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggt > 1:1305765‑M2/150‑150 (MQ=255)gacgaatttacgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggt > 2:359153‑M2/150‑150 (MQ=255)gacgaatttacgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggt > 1:669971‑M2/150‑150 (MQ=255) acgaatttatgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggtg < 2:724698‑M2/2‑1 (MQ=255) acgaatttacgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggtg < 2:340343‑M2/2‑1 (MQ=255) acgaatttacgccgcacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggtg < 2:475893‑M2/2‑1 (MQ=255) gcccAAAGAGTCGCATCGTGATCCCTCCAGTCAATCCTGCATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTCCTCGCTTACACCACCAGCCGCGCGCAGGATGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTa < 1:158285/147‑1 (MQ=1) ttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggtg < 2:36477‑M2/2‑1 (MQ=255) ttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggtg > 1:36477‑M2/111‑112 (MQ=255) gcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggtg > 1:304070‑M2/94‑95 (MQ=255) gcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggtg < 2:304070‑M2/2‑1 (MQ=255) cgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggtg > 2:1071687‑M2/87‑88 (MQ=255) cgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggtg < 1:1071687‑M2/2‑1 (MQ=255) accggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggtg < 1:501503‑M2/2‑1 (MQ=255) accggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggtg > 2:501503‑M2/78‑79 (MQ=255) cgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggT‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAAc > 2:1402224‑M2/49‑123 (MQ=255) cgcgatagccctccagcaggcgcagcggcacctcctgcgcgcggctggT‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAAc < 1:1402224‑M2/75‑1 (MQ=255) cctcccgcgcgcgcagcggcacctcctgcgcgcggctggTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCCTGCATGGCGCATGTCCGGCGTAAAt > 2:493154‑M2/40‑150 (MQ=255) tccagcaggcgcagcggcacctcctgcgcgcggctggTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTaaa > 2:134494‑M2/38‑147 (MQ=255) tccagcaggcgcagcggcacctcctgcgcgcggctggTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTaaa < 1:134494‑M2/110‑1 (MQ=255) tccagcaggcgcagcggcacctcctgcgcgcggctgcTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATtc > 1:966572‑M2/38‑150 (MQ=255) cctccagcaggcgcagcggcacctcctgcgcctgcTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGc > 1:598902‑M2/36‑120 (MQ=255) cctccagcaggcgcagcggcacctcctgcgcctgcTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGc < 2:598902‑M2/85‑1 (MQ=255) gcaggcgcagcggcacctcctgcgcgcggctggTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGc < 2:147259‑M2/105‑1 (MQ=255) gcaggcgcagcggcacctcctgcgcgcggctggTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGc > 1:147259‑M2/34‑138 (MQ=255) TGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAGCCTAAGGGCAAGAGCg < 1:1003379‑M2/150‑1 (MQ=255) | TGAAACTCGCGTGCAGGTGCTCAAAGAGCCGGATCGTGATCCGACCAGTCAATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAGCCTAAGGGCAAGAGCG > NC_002947/4537441‑4537739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |