New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4861173 =45 (0.860)13 (0.310) 10/196 NT 25.1% intergenic (‑79/+158) ligA/PP_4275 DNA ligase/cell division protein ZipA
?NC_002947 4861264 = 42 (1.010)intergenic (‑170/+67) ligA/PP_4275 DNA ligase/cell division protein ZipA

Only 100 of 132 total aligned reads displayed.

GCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCG  >  NC_002947/4861025‑4861320
                                                                                                                                                    |                                                                                                                                                   
gCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCGGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGC                                                                                                                                                    <  1:1079107‑M1/150‑1 (MQ=255)
 cACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCC                                                                                                                                                   >  1:874273‑M1/1‑150 (MQ=255)
       gtagCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCG                                                                                                                                             >  2:524701‑M1/1‑150 (MQ=255)
       ccgcccagaccatcgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccaGCCTCTTcg                                                                                                                                             <  1:689769‑M1/9‑1 (MQ=255)
          gCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGG                                                                                                                                          <  2:655017‑M1/150‑1 (MQ=255)
          cccagaccatcgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCgg                                                                                                                                          >  1:988809‑M1/139‑150 (MQ=255)
                  tgtgCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCC                                                                                                                                  >  1:474899‑M1/1‑150 (MQ=255)
                   tcgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCg                                                                                                                                 <  2:1279458‑M1/21‑1 (MQ=255)
                    cgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGc                                                                                                                                >  1:569713‑M1/129‑150 (MQ=255)
                       tGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCC                                                                                                                             >  1:1205450‑M1/1‑150 (MQ=255)
                        cactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccaGCCTCTTCGCGGGTAAACCCGCTccc                                                                                                                            >  2:689769‑M1/125‑150 (MQ=255)
                           taccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTcgc                                                                                                                                            >  2:1052534‑M1/122‑131 (MQ=255)
                               cTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGATCCCACAAggg                                                                                                                     >  1:772557/1‑150 (MQ=255)
                                tCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGc                                                                                                                    >  1:631760/1‑150 (MQ=255)
                                tCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGc                                                                                                                    <  2:1251889/150‑1 (MQ=255)
                                tCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGc                                                                                                                    <  1:220580/150‑1 (MQ=255)
                                          gTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGcc                                                                                                          <  1:524701/150‑1 (MQ=255)
                                           tcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGccc                                                                                                         <  2:829871‑M1/45‑1 (MQ=255)
                                              gAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAg                                                                                                      >  2:1366777/1‑150 (MQ=255)
                                                gtcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccaGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAggg                                                                                                    <  1:1129142‑M1/50‑1 (MQ=255)
                                                  cgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGGCGTCACATGCCCTAGGGCg                                                                                                  >  2:483665‑M1/99‑150 (MQ=255)
                                                   tACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCgg                                                                                                 <  2:979507/150‑1 (MQ=255)
                                                      gggTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCGTCTTCGCGGGTAAACCCGCTCCtacaggtacatcaacgccctagggcatgtga                                                                                              >  1:1357556‑M1/1‑119 (MQ=255)
                                                      gggTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGa                                                                                              <  1:1002462/150‑1 (MQ=255)
                                                         tttCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCACACAAGGGCGTCACATGCCCTAGGGCGGTGATGt                                                                                           >  2:731931/1‑150 (MQ=255)
                                                         tttCGGCGGTCATGGGATTTGTCTTCGCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCACACAAGGGCGTCACATGCCCTAGGGCGGTGATGt                                                                                           >  2:19261/1‑150 (MQ=255)
                                                           tCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTAc                                                                                         <  2:184009/150‑1 (MQ=255)
                                                              gcggTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTg                                                                                      >  2:1318138/1‑150 (MQ=255)
                                                               cggTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGt                                                                                     <  1:419806/150‑1 (MQ=255)
                                                                ggTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTa                                                                                                       <  2:1007051/131‑1 (MQ=255)
                                                                ggTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTa                                                                                                       >  1:1007051/1‑131 (MQ=255)
                                                                 gTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAg                                                                                   >  2:964721‑M2/1‑149 (MQ=255)
                                                                 gTCATGGAACTCGCCTTCTCTTGCCAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCTTCTTCGCGGATAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAg                                                                                   >  1:1130174‑M2/1‑149 (MQ=255)
                                                                    ccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTAc                                                                                         >  1:1255933‑M1/81‑141 (MQ=255)
                                                                    ccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccaGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAg                                                                                <  1:913550‑M1/70‑1 (MQ=255)
                                                                     tGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAATTAGTGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagc                                                                               <  1:824874‑M2/150‑6 (MQ=255)
                                                                     cagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGc                                                                               >  2:677482‑M1/80‑150 (MQ=255)
                                                                      agaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGgagag                                                                              >  2:708807‑M1/79‑148 (MQ=255)
                                                                      agaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCg                                                                              >  2:836394‑M1/79‑150 (MQ=255)
                                                                       ggATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCtacaggtacatcaccgccctagggcatgtgacgcccttgtgggagcgg                                                                             <  2:1299067‑M1/150‑49 (MQ=255)
                                                                       gaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCgg                                                                             >  1:1003749‑M1/78‑150 (MQ=255)
                                                                        gATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGTGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCtacaggtacatcaccgccctagggcatgtgacgcccttgtgggagcggg                                                                            <  1:807851‑M1/150‑50 (MQ=255)
                                                                         aTTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCtacaggtacatcaccgccctagggcatgtgacgcccttgtgggagcgggt                                                                           <  2:1279786‑M1/150‑51 (MQ=255)
                                                                          tttGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtt                                                                          <  1:1298382‑M2/150‑11 (MQ=255)
                                                                            tGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggttta                                                                        <  2:534937‑M2/150‑13 (MQ=255)
                                                                              tcttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacc                                                                      <  2:320709‑M2/150‑15 (MQ=255)
                                                                              tcttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGGCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacc                                                                      <  2:1028553‑M2/150‑15 (MQ=255)
                                                                              tcttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTACCACAAGGGCGCCACATGCCCCAGGGCGCTGATGTACCTGTAggcgcgggtttacc                                                                      <  2:38306‑M2/150‑15 (MQ=255)
                                                                                ttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTAGCTGTAggagggggtttacccg                                                                    <  1:468636‑M2/150‑17 (MQ=255)
                                                                                 tctcTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgc                                                                   >  2:1205450‑M2/1‑133 (MQ=255)
                                                                                 tctcTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgc                                                                   >  1:1318138‑M2/1‑133 (MQ=255)
                                                                                  ctctTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcg                                                                  <  2:1135769‑M2/150‑19 (MQ=255)
                                                                                    ctTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCAAGGTCTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCACCtacaggtacatcaccgccctagggcatgtgacgcccttgtgggagcgggtttaccagcgaa                                                                <  1:1330799‑M1/150‑62 (MQ=255)
                                                                                       gcaaagcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagag                                                             >  1:404358‑M2/1‑127 (MQ=255)
                                                                                         gacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCgg                                                                                                                                          >  1:1387615‑M1/60‑71 (MQ=255)
                                                                                         gacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCgg                                                                                                                                          <  2:1387615‑M1/12‑1 (MQ=255)
                                                                                          aagcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgg                                                                             <  2:443742‑M2/131‑8 (MQ=255)
                                                                                          aagcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgg                                                                             >  1:443742‑M2/1‑124 (MQ=255)
                                                                                            gcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGCGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCgg                                                        <  1:1366777/150‑1 (MQ=255)
                                                                                             caaaAGAGCAGCTTGGGGTGGTGCATGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGc                                                       >  1:802783/1‑150 (MQ=255)
                                                                                              aaaaGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGca                                                      >  1:106863/1‑150 (MQ=255)
                                                                                              aaaaGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTGTACCCGCGAAGAGGCCGGcc                                                      >  2:608102/1‑149 (MQ=255)
                                                                                               aaaGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGC                                                                                                                                <  2:792408‑M1/75‑1 (MQ=255)
                                                                                                 agagCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAg                                                   <  2:1134337/150‑1 (MQ=255)
                                                                                                     gagcTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCaa                                               <  2:1423190/149‑1 (MQ=255)
                                                                                                         gagggcgtgctggccggttcgggtatcgtcgttgcctgtgccaGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAacgac                                           >  2:913550‑M1/44‑150 (MQ=255)
                                                                                                             ggtggtGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgg                                                                             >  1:1187436‑M2/1‑105 (MQ=255)
                                                                                                              gtggtgCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCtacaggtacatcaccgccctagggcatgtgacgcccttgtgggagcgg                                                                             >  1:237786‑M1/1‑63 (MQ=255)
                                                                                                              gtggtgCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCtacaggtacatcaccgccctagggcatgtgacgcccttgtgggagcgg                                                                             <  2:237786‑M1/111‑49 (MQ=255)
                                                                                                              gtggtgCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGGGATGTACCTGTGGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATAc                                      >  1:1279458/1‑150 (MQ=255)
                                                                                                                 gggCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCg                                   >  1:59673/3‑150 (MQ=255)
                                                                                                                    cGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtaaacccgctc                                                                 <  1:868540‑M2/117‑20 (MQ=255)
                                                                                                                    cGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAACAGGCCGGCACAGGCAACGACGATACCCGAAc                                <  2:874273/150‑1 (MQ=255)
                                                                                                                          gTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCa                          <  2:445009/150‑1 (MQ=255)
                                                                                                                          gTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCa                          <  1:534937/150‑1 (MQ=255)
                                                                                                                               aGGTGTCTGTTGACTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCtacaggtacatcaccgccctagggcatgtgacgcccttgtgggagcgg                                                                             <  1:305627‑M1/94‑49 (MQ=255)
                                                                                                                               aGGTGTCTGTTGACTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCtacaggtacatcaccgccctagggcatgtgacgcccttgtgggagcgg                                                                             >  2:305627‑M1/1‑46 (MQ=255)
                                                                                                                               aGGTGTCTGTTGACTGTGCCAGCCTCTTAGCGGGTAAACCCGCTCCtacaggtacatcaccgccctagggcatgtgacgcccttgtgggagcgg                                                                             >  1:1107184‑M1/1‑46 (MQ=255)
                                                                                                                                 gtgtCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCtacaggtacatcaccgccctagggcatgtgacgcccttgtgggagcgg                                                                             >  1:1208703‑M1/1‑44 (MQ=255)
                                                                                                                                 gtgtCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCtacaggtacatcaccgccctagggcatgtgacgcccttgtgggagcgg                                                                             <  2:1208703‑M1/92‑49 (MQ=255)
                                                                                                                                 gtgtCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCtacaggtacatcaccgccctagggcatgtgacgcccttgtggga                                                                                 >  1:498637‑M1/1‑44 (MQ=255)
                                                                                                                                 gtgtCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAg                                                   <  1:995132/118‑1 (MQ=255)
                                                                                                                                      tGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaa                                                                >  1:978024‑M2/1‑80 (MQ=255)
                                                                                                                                      agtTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaa                                                                <  2:978024‑M2/99‑21 (MQ=255)
                                                                                                                                           aCTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAggg                                                                                                    >  1:1047206/1‑59 (MQ=255)
                                                                                                                                           aCTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAggg                                                                                                    <  2:1047206/59‑1 (MQ=255)
                                                                                                                                           aCTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGgctgc         >  2:723397/1‑150 (MQ=255)
                                                                                                                                             tgtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTAc                                                                                         >  2:74261/1‑68 (MQ=255)
                                                                                                                                             tgtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTAc                                                                                         <  1:74261/68‑1 (MQ=255)
                                                                                                                                             tgtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgc                                                                   >  2:1328755‑M2/1‑73 (MQ=255)
                                                                                                                                             tgtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgc                                                                   <  1:1328755‑M2/90‑18 (MQ=255)
                                                                                                                                             tgtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGctc       >  1:422978/1‑150 (MQ=255)
                                                                                                                                              gtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGctct      <  2:802783/150‑1 (MQ=255)
                                                                                                                                                 ccAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTc   <  2:422978/150‑1 (MQ=255)
                                                                                                                                                  cAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCCCCTGCCCTAGGGCGGTGCTGGCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACACGCAACGACGATACCCGGACCGGCCAGCACGCCCTCAGGCTGCTCTTTCg  >  2:72062/1‑150 (MQ=38)
                                                                                                                                                  cAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTCGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCg  >  2:1258875/1‑150 (MQ=255)
                                                                                                                                                  cAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCg  >  1:1098315/1‑150 (MQ=255)
                                                                                                                                                  cAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCg  >  2:1139165/1‑150 (MQ=255)
                                                                                                                                                    GCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGa                                                                                              <  1:744551‑M1/56‑1 (MQ=255)
                                                                                                                                                    GCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGa                                                                                              >  2:744551‑M1/1‑56 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCG  >  NC_002947/4861025‑4861320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.