New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5053118 = | 47 (0.890) | 6 (0.120) | 5/226 | NT | 11.5% | coding (1381/1833 nt) | gsiA | glutathione ABC transporter ATP‑binding protein |
? | NC_002947 | 5053171 = | 49 (1.020) | coding (1328/1833 nt) | gsiA | glutathione ABC transporter ATP‑binding protein |
GAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACTTTTACCGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTAAAGCCCATGCACTCTGAGCGGCTCAATGATCGATTGAGC > NC_002947/5052972‑5053262 | atccagatggtcttccaggatccttattcgagcctgaatccacggcagactgtagctcaatcgatcattgagccgctcagagtgcatgggctttacgatgccaagcgatgtgaagaggtcgccattgagttgctcgtaaaagtgggGCTg < 2:604491‑M1/4‑1 (MQ=255) aagcccaagcccAGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACTTTTACCGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGc > 2:947193/1‑150 (MQ=255) aagcccaagcccAGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACTTTTACCGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGc > 2:273319/1‑150 (MQ=255) caagcccaGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACTTTTACCGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGcc > 1:256025/1‑150 (MQ=255) aagcccaGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACTTTTACCGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCa < 2:1325269/150‑1 (MQ=255) ccaGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACTTTTACCGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAgaga > 2:523500/1‑150 (MQ=255) ccttattcgagcctgaatccacggcagactgtagctcaatcgatcattgagccgctcagagtgcatgggctttacgatgccaagcgatgtgaagaggtcgccattgagttgctcgtaaaagtgggGCTGCCCGCCAGAGAACTCGTGCgg < 1:271173‑M1/25‑1 (MQ=255) aGCAACAGATTCACAATTTGGACTTTTACCGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCaa < 1:808660/150‑1 (MQ=255) cctgaatccacggcagactgtagctcaatcgatcattgagccgctcagagtgcatgggctttacgatgccaagcgatgtgaagaggtcgccattgagttgctcgtaaaagtgggGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAag < 1:832873‑M1/36‑1 (MQ=255) tCACAATTTGGACTTTTACCGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCt < 1:949074/108‑1 (MQ=255) tCACAATTTGGACTTTTACCGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCt > 2:949074/1‑108 (MQ=255) acaATTTGGACTTTGACCGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATcggcg < 1:352952/150‑1 (MQ=255) gcagactgtagctcaatcgatcattgagccgctcagagtgcatgggctttacgatgccaagcgatgtgaagaggtcgccattgagttgctcgtaaaagtgggGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATcggcgg > 2:271173‑M1/103‑150 (MQ=255) gactgtagctcaatcgatcattgagccgctcagagtgcatgggctttacgatgccaagcgatgtgaagaggtcgccattgagttgctcgtaaaagtgggGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCa > 2:832873‑M1/100‑150 (MQ=255) tGGACTTTTACCGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGc > 2:402747/1‑150 (MQ=255) gACTTTTACCGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGccc < 1:677493/150‑1 (MQ=255) cTTTTACCGATACCTCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCa > 1:964217/1‑150 (MQ=255) ttttACCGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCAc > 1:945962/1‑150 (MQ=255) cGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCTTGCCAGAGAACTCGTGCGGCAAGCGCAAAGCAGCATCGGCGGGCAGCCCCACTTTTAc < 2:195634/150‑1 (MQ=255) cGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTAc > 1:644522/1‑150 (MQ=255) cGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTAc > 2:651048/1‑150 (MQ=255) aTACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGa < 1:651048/150‑1 (MQ=255) aTACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCATGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGa < 1:96385/150‑1 (MQ=255) aTCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCaa < 2:964217/150‑1 (MQ=255) aTCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTCTACGAGCaa > 1:1055158/1‑150 (MQ=255) tCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAAc > 2:1047476/1‑150 (MQ=255) tCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAAc > 2:1143753/1‑150 (MQ=255) ccAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACt > 1:83057/1‑150 (MQ=255) cAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTc > 2:453922/1‑150 (MQ=255) cAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTc > 1:604491/1‑150 (MQ=255) gCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATg < 1:523500/150‑1 (MQ=255) aaaCCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGa < 1:273319/150‑1 (MQ=255) aaCCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGAc > 1:269837/1‑150 (MQ=255) cGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCACGCGAGATCGGGCGTCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACctc > 2:397958/1‑150 (MQ=255) tCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCaa > 2:197598/1‑136 (MQ=255) tCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCaa < 1:197598/136‑1 (MQ=255) tCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTca < 2:256025/150‑1 (MQ=255) tCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCAc < 1:131786/116‑1 (MQ=255) tCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCAc > 2:131786/1‑116 (MQ=255) cGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCt < 1:453922/150‑1 (MQ=255) cAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTgg > 1:1050869/1‑150 (MQ=255) tGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGt < 1:947193/150‑1 (MQ=255) cTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTaaa > 2:1031394/1‑150 (MQ=255) cTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTaaa > 1:112019/1‑150 (MQ=255) ctcAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGTAAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTAAAGCCCa < 1:882938/150‑1 (MQ=255) ctcAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTAAAGCCCa < 2:269837/150‑1 (MQ=255) tcAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTAAAGCCCAt > 2:406228/1‑150 (MQ=255) gagCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTAAAGCCCATGCACTCTGa < 2:83057/150‑1 (MQ=255) gCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTAAAGCCCATGCACTCTGAgg > 1:915213/1‑149 (MQ=255) gCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTAAAGCCCATGCACTCTGAGc < 2:915213/150‑1 (MQ=255) cattgagttgctcgtaaaagtgggGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCa < 2:1156074‑M1/51‑1 (MQ=255) cattgagttgctcgtaaaagtgggGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCa > 1:1156074‑M1/25‑75 (MQ=255) cacacaCGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTCTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTAAAGCCCATGCACTCTGAGCGGCTCAATGATc < 2:1055158/150‑1 (MQ=255) cacacGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTAAAGCCCATGCACTCTGAGCGGCTCAATGATCGa < 1:406228/150‑1 (MQ=255) gTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGa > 2:75832/1‑87 (MQ=255) gTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGa < 1:75832/87‑1 (MQ=255) gTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTAAAGCCCATGCACTCTGAGCGGCTCAATGATCGATTGAg > 2:462820/1‑150 (MQ=255) gTTGACGCTGCCAGACAGAGAACTAGTGCGGCAAGCGCCAAGCAGCATTGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTAAAGCCCATGCACTCTGAGCGGCTCAATGATCGATTGAg > 2:1235747/1‑150 (MQ=255) ttGACGCTGCCCGCCAGAGAGCTCTTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGa < 1:739204/71‑1 (MQ=255) ttGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGa > 2:739204/1‑71 (MQ=255) ttGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTAAAGCCCATGCACTCTGAGCGGCTCAATGATCGATTGAGc > 2:1199255/1‑150 (MQ=255) ttGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTGCACAGCGCGTGGCATCGTAAAGCCCATGCACTCTGAGCGGCTCTATGATCGATTGAGc < 1:254420/150‑1 (MQ=255) | GAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACTTTTACCGATACATCCAAGGCCGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCAGAGAACTCGTGCGGCAAGCGCCAAGCAGCATCGGCGGGCAGCCCCACTTTTACGAGCAACTCAATGGCGACCTCTTCACATCGCTTGGCATCGTAAAGCCCATGCACTCTGAGCGGCTCAATGATCGATTGAGC > NC_002947/5052972‑5053262 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |