New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5199072	37 (0.700)	5 (0.100)	5/234	NT	11.0%	coding (311/912 nt)	PP_4579	LysR family transcriptional regulator
	?	NC_002947	= 5199112	46 (0.920)					coding (351/912 nt)	PP_4579	LysR family transcriptional regulator

TCAGCCTGACCCCGGAAGGCAGCAAGGTACTGGAATACGCCGAACGCATGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGA  >  NC_002947/5198925‑5199221                                                                                                                                                    |                                                                                                                                                      tCAGCCTGACCCCGGAAGGCAGCAAGGTACTGGAATACGCCGAACGCATGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCTACACCTGGa                                                                                                                                                     >  1:521912/1‑150 (MQ=255) tCAGCCTGACCCCGGAAGGCAGCAAGGTACTGGAATACGCCGAACGCATGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGa                                                                                                                                                     >  1:1094694/1‑150 (MQ=255)  cAGCCTGACCCCGGAAGGCAGCAAGGTACTGGAATACGCCGAACGCATGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGAt                                                                                                                                                    <  2:553485/150‑1 (MQ=255)    gCCTGACCCCGGAAGGCAGCAAGGTACTGGAATACGCCGAACGCATGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATCCTGTGATCCACACCTGGAtct                                                                                                                                                  >  2:7669/1‑148 (MQ=255)           cccGGAAGGCAGCAAGGGACGGGAATACGCCGAACGCATGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCt                                                                                                                                           >  2:59497/1‑150 (MQ=255)                         aGGTACTGGAATACGCCGAACGCATGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGa                                                                                                                             <  2:1370529/150‑1 (MQ=255)                         aGGTACTGGAATACGCCGAACGCATGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGa                                                                                                                             <  2:412783/150‑1 (MQ=255)                             aCTGGAGTACGCCGAACGCATGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGCCAGCGACCGGGCCAAGTTCGGGCGCATTCGCATCGGGGTGAGGGATACTATGATCCACACCTGGTTGAGCGCGCTGGTGGCGGAGCTGACCGa                                                                                                                         >  1:1029665/1‑150 (MQ=255)                                          gAACGCATGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCAcag                                                                                                            <  2:1050089‑M2/150‑4 (MQ=255)                                            aCGCATGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCAcaggt                                                                                                          >  1:59497‑M2/1‑145 (MQ=255)                                                 tGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGtgggtagcgctcggtcagctccgccaccagcgcgctcatccaggtgtgga                                                                                                     <  2:183063‑M1/150‑51 (MQ=255)                                                 tGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGtgggtagcgctcggtcagctccgccaccagcgcgctcatccaggtgtgga                                                                                                     >  1:183063‑M1/1‑100 (MQ=255)                                                 tGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGaaa                                                                                                     >  1:944121/1‑150 (MQ=255)                                                   cTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATc                                                                                                   >  1:618971/1‑150 (MQ=255)                                                        aaCCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACt                                                                                              >  1:913302/1‑150 (MQ=255)                                                        aaCCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACt                                                                                              >  1:454204/1‑150 (MQ=255)                                                          ccGGCAAGGCCATGAAGCAATCGCTGCAAAGCGACCGGGACAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACtgg                                                                                            <  2:944121/150‑1 (MQ=255)                                                           cgtcAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACtggt                                                                                           <  1:57722/147‑1 (MQ=255)                                                               aaGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGcc                                                                                       <  1:1050089/150‑1 (MQ=255)                                                                   ccATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGgatgagcgctcggtcagctccgccaccagcgcgctcatccagg                                                                                                            >  1:70505‑M1/1‑82 (MQ=255)                                                                   ccATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGgatgagcgctcggtcagctccgccaccagcgcgctcatccagg                                                                                                            <  2:70505‑M1/125‑44 (MQ=255)                                                                   ccACGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATAGGCATCGTGGTGATGGATACTGTGATCCACACCTGtgggtagcgatcggtcagctccgccaccagcgcgctcatccaggtgtggatcacagtatccatcaccc                                                                                   <  1:1224153‑M1/150‑69 (MQ=255)                                                                    cATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGaa                                                                                                >  2:1254297/1‑136 (MQ=255)                                                                    cATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGaa                                                                                                <  1:1254297/136‑1 (MQ=255)                                                                      tGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACcg                                                                                >  1:1176766/1‑150 (MQ=255)                                                                              tCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAAc                                                                        <  2:913302/150‑1 (MQ=255)                                                                              tCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAAc                                                                        <  2:618971/150‑1 (MQ=255)                                                                                          gACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTGGCGCGagcag                                                            >  2:662901/1‑150 (MQ=255)                                                                                                gCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAg                                                      >  1:897764/1‑150 (MQ=255)                                                                                                gCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAg                                                      >  1:1059707/1‑150 (MQ=255)                                                                                                 ccAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAGa                                                     >  1:588428/1‑150 (MQ=255)                                                                                                  cAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCAcaggtg                                                                                                         >  1:1400580‑M2/1‑91 (MQ=255)                                                                                                  cAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCAcaggtg                                                                                                         <  2:1400580‑M2/97‑7 (MQ=255)                                                                                                            cgcATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGTGTGTTCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAGAAGGGCTTTCtt                                          <  1:513439/150‑1 (MQ=255)                                                                                                             gcATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCAcaggtg                                                                                                         <  1:1165931‑M2/86‑7 (MQ=255)                                                                                                             gcATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCAcaggtg                                                                                                         >  2:1165931‑M2/1‑80 (MQ=255)                                                                                                              cATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAGCTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGa                                        <  1:771891/150‑1 (MQ=255)                                                                                                               aTTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACtgg                                                                                            <  1:221549/97‑1 (MQ=255)                                                                                                               aTTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACtgg                                                                                            >  2:221549/1‑97 (MQ=255)                                                                                                               aTTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACcgc                                                                               <  2:916922/110‑1 (MQ=255)                                                                                                               aTTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACcgc                                                                               >  1:916922/1‑110 (MQ=255)                                                                                                                ttCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGAGGAGCTGACCGAGAGATACGCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACg                                      >  1:1242751/1‑150 (MQ=255)                                                                                                                 tCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGt                                     <  2:454204/150‑1 (MQ=255)                                                                                                                        ggggTGATGGATAATGTGATCCACACCTGGATGAGCGCGCTGGTAGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAAGCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAGAAGGGCTTTCCTGACGCTATCTTg                              <  2:1029665/150‑1 (MQ=255)                                                                                                                         gggTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGATCGCTACCCAcaggtgtggatcacagtatccatcaccacgatgcctatgcgcccgaccttggcccggtcgctgtccagcgattgcttcgtgg                             <  1:1224153‑M2/150‑83 (MQ=255)                                                                                                                         gggTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGc                             <  2:897764/150‑1 (MQ=255)                                                                                                                          ggTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGATACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGATGCAGAAGGGCTTTCTTGACGTTATCTCGCa                            <  2:521912/150‑1 (MQ=255)                                                                                                                               tGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCGACGCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCg                       >  2:126269/1‑150 (MQ=255)                                                                                                                                   tACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTAGACACTGAGACCGCGCTGAACTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACtt                   >  1:1314760/1‑150 (MQ=255)                                                                                                                                     cTGTGATCCACAACTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTtgc                 >  2:837768/1‑150 (MQ=255)                                                                                                                                        tgATCCACACCTGGATGAGCGCGCTGGTGGCGGCGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGGGCAGCTGCAGAAGGGCTTTCTTGAAGTTATCTTGCAGACCGACTtgctgc              >  2:497873/1‑150 (MQ=255)                                                                                                                                          aTCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTgcgc            >  2:941091/1‑150 (MQ=255)                                                                                                                                           tCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCAcaggtgtggatcacagtatccatcaccccgatgcgaatgcgcccgaccttggcccggtcgctgtccagcgattgcttcatggccttggcggtttccagca           <  2:183063‑M2/150‑101 (MQ=255)                                                                                                                                           tCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCAcaggtgtggatcacagtatccatcaccccgatgcgaatgcgcccgaccttggcccggtcgctgtccagcgattgcttcatggccttggcggtttccagca           >  1:183063‑M2/1‑50 (MQ=255)                                                                                                                                              acacCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGc        >  2:665548/1‑150 (MQ=255)                                                                                                                                               cacCTGtgggtagcgctcggtcagctccgccaccagcgcgctcatccaggtgtggatcacagtatccatcaccccgatgcgaatgcgcccgaccttg                                                            >  1:1400580‑M1/1‑6 (MQ=255)                                                                                                                                               cacCTGtgggtagcgctcggtcagctccgccaccagcgcgctcatccaggtgtggatcacagtatccatcaccccgatgcgaatgcgcccgaccttg                                                            <  2:1400580‑M1/97‑92 (MQ=255)                                                                                                                                               cacCTGtgggtagcgctcggtcagctccgccaccagcgcgctcatccaggtgtggatcacagtatccatcaccccgatgcgaatgc                                                                       <  1:1165931‑M1/86‑81 (MQ=255)                                                                                                                                               cacCTGtgggtagcgctcggtcagctccgccaccagcgcgctcatccaggtgtggatcacagtatccatcaccccgatgcgaatgc                                                                       >  2:1165931‑M1/1‑6 (MQ=255)                                                                                                                                                acCTGtgggtagcgctcggtcagctccgccaccagcgcgctcatccaggtgtggatcacagtatccatcaccccgatgcgaatgcgcccgaccttggcccggtcgctgtccagcgattgcttcatggccttggcggtttccagcatgcgt      >  1:59497‑M1/1‑5 (MQ=255)                                                                                                                                                 ccTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTCATCaggtgtggatcacagtatccatcaccccgatgcgaatgcgcccgaccttggcccggtcgctgtccagcgattgcttcatgg                               >  1:70505‑M2/1‑44 (MQ=255)                                                                                                                                                 ccTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTCATCaggtgtggatcacagtatccatcaccccgatgcgaatgcgcccgaccttggcccggtcgctgtccagcgattgcttcatgg                               <  2:70505‑M2/125‑82 (MQ=255)                                                                                                                                                  cTGtgggtagcgctcggtcagctccgccaccagcgcgctcatccaggtgtggatcacagtatccatcaccccgatgcgaatgcgcccgaccttggcccggtcgctgtccagcgattgcttcatggccttggcggtttccagcatgcgttc    <  2:1050089‑M1/150‑148 (MQ=255)                                                                                                                                                  cTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATc    <  2:1176766/150‑1 (MQ=255)                                                                                                                                                    ggATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGa  <  2:1094694/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      TCAGCCTGACCCCGGAAGGCAGCAAGGTACTGGAATACGCCGAACGCATGCTGGAAACCGCCAAGGCCATGAAGCAATCGCTGGACAGCGACCGGGCCAAGGTCGGGCGCATTCGCATCGGGGTGATGGATACTGTGATCCACACCTGGATGAGCGCGCTGGTGGCGGAGCTGACCGAGCGCTACCCACAGGTGGAAATCGAACTGGTGGCCGACACCGCGCTGAACTTGCGCGAGCAGCTGCAGAAGGGCTTTCTTGACGTTATCTTGCAGACCGACTTGCTGCGCGAGCAATCGA  >  NC_002947/5198925‑5199221

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.