New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 550663736 (0.680)13 (0.320) 11/188 NT 29.7% intergenic (+48/‑151) PP_4839/cycA iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
?NC_002947 = 5506650 34 (0.850)intergenic (+61/‑138) PP_4839/cycA iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease

Only 100 of 103 total aligned reads displayed.

CTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGC  >  NC_002947/5506491‑5506785
                                                                                                                                                  |                                                                                                                                                    
ctggGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAg                                                                                                                                                   <  1:1280394/150‑1 (MQ=255)
 tggGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAgg                                                                                                                                                  <  1:641788/150‑1 (MQ=255)
   ggggTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGa                                                                                                                                                <  2:1180642/150‑1 (MQ=255)
     ggTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAcc                                                                                                                                              >  1:801290/1‑150 (MQ=255)
         aTGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGt                                                                                                                                          <  1:923113/150‑1 (MQ=255)
            ttCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggt                                                                                                                                              <  1:638589‑M1/143‑9 (MQ=255)
            ttCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggt                                                                                                                                              >  2:638589‑M1/1‑135 (MQ=255)
            ttCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgt                                                                                                                                       <  1:2768‑M2/150‑3 (MQ=255)
            ttCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgt                                                                                                                                       <  1:259272‑M2/150‑3 (MQ=255)
                cGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtagga                                                                                                                                   <  1:1293341‑M1/150‑20 (MQ=255)
                    ggtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgg                                                                                                                               >  1:921092‑M2/1‑140 (MQ=255)
                    ggtggGGGTGGCGATGGTGGTGATGTGGCGGGAGGTTGGTATGGTGGTGAGGCGCAGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCTTACGAGGGACCGCGTTgtaggagcgg                                                                                                                               >  2:691376‑M2/1‑140 (MQ=255)
                     gtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcggg                                                                                                                              <  2:481731‑M1/150‑25 (MQ=255)
                     gtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcggg                                                                                                                              >  1:78510‑M2/1‑139 (MQ=255)
                     gtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcggg                                                                                                                              <  1:480704‑M2/150‑12 (MQ=255)
                     gtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcggg                                                                                                                              >  1:46890‑M2/1‑139 (MQ=255)
                           gtgtCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacc                                                                                                                        <  1:1210863‑M2/150‑18 (MQ=255)
                              tCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgc                                                                                                                     >  2:1210863‑M2/1‑130 (MQ=255)
                                gATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtagg                                                                                                                                    <  2:993162‑M1/133‑19 (MQ=255)
                                gATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtagg                                                                                                                                    >  1:993162‑M1/1‑115 (MQ=255)
                                gATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcga                                                                                                                   <  1:635429‑M2/150‑23 (MQ=255)
                                  tggtggTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaa                                                                                                                  >  1:1073940‑M2/1‑126 (MQ=255)
                                  tggtggTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaa                                                                                                                  <  2:1073940‑M2/149‑24 (MQ=255)
                                   ggtggtGTTGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAGCCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaaga                                                                                                                >  2:1266484‑M2/1‑125 (MQ=255)
                                    gtggtgATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCGTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagag                                                                                                               >  2:302800‑M2/1‑124 (MQ=255)
                                              ggggggTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAg                                                                                                     <  1:48643/150‑1 (MQ=255)
                                              ggggggTGGAGAGTTGGGTGGGGAGGCGCGGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCCCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAg                                                                                                     <  2:47686/150‑1 (MQ=37)
                                                 gggTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCg                                                                                                           >  1:599445/1‑141 (MQ=255)
                                                 gggTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCg                                                                                                           <  2:599445/141‑1 (MQ=255)
                                                        tAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCt                                                                                           <  2:480704/150‑1 (MQ=255)
                                                              aagggtgAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCg                                                                                     <  2:669667/147‑1 (MQ=255)
                                                                  gtgAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgg                                                                                                                               >  2:204209‑M1/1‑81 (MQ=255)
                                                                  gtgAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgg                                                                                                                               <  1:204209‑M1/104‑24 (MQ=255)
                                                                    gAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACg                                                                                                                                                     >  1:286720/1‑80 (MQ=255)
                                                                    gAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACg                                                                                                                                                     <  2:286720/80‑1 (MQ=255)
                                                                     aGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGc                                                                              >  1:470302/1‑150 (MQ=255)
                                                                       gcgcCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgg                                                                                                                               >  1:548497‑M1/1‑76 (MQ=255)
                                                                       gcgcCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgg                                                                                                                               <  2:548497‑M1/99‑24 (MQ=255)
                                                                       gcgcCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCag                                                                            >  2:719944/1‑150 (MQ=255)
                                                                          ccgccgGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCagagg                                                                         >  2:802665/1‑149 (MQ=255)
                                                                              cgGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGAt                                                                     <  2:470302/150‑1 (MQ=255)
                                                                                  tCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaaga                                                                                                                <  2:720845‑M2/103‑26 (MQ=255)
                                                                                  tCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaaga                                                                                                                >  1:720845‑M2/1‑78 (MQ=255)
                                                                                   gttGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAACCCCGCTCCTACGAGGGACCGCGTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTc                                                                <  2:1047407/149‑1 (MQ=255)
                                                                                       gCCAGCGCTTGAGCCTTGTGTTGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggcca                                                                                                           >  2:570151‑M1/1‑60 (MQ=255)
                                                                                       gCCAGCGCTTGAGCCTTGTGTTGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggcca                                                                                                           <  1:570151‑M1/103‑44 (MQ=255)
                                                                                          aGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGcccc                                                         >  2:670677/1‑150 (MQ=255)
                                                                                           gcgcTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGCTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCg                                                        >  1:1358622/1‑150 (MQ=255)
                                                                                                 gAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTgg                                                  >  2:638590/1‑150 (MQ=255)
                                                                                                 gAGCATTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCCGACTGGTACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTgg                                                  <  1:312986/150‑1 (MQ=37)
                                                                                                   gCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGaa                                                <  2:259272/150‑1 (MQ=255)
                                                                                                    ccTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGt                                                                         <  1:730350/124‑1 (MQ=255)
                                                                                                    ccTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGt                                                                         >  2:730350/1‑124 (MQ=255)
                                                                                                              ccTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTta                                     >  2:262421/1‑150 (MQ=255)
                                                                                                              ccTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTta                                     >  1:1011494/1‑150 (MQ=255)
                                                                                                               cTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTAC                                                                                                                                                      >  1:129707‑M1/1‑36 (MQ=255)
                                                                                                               cTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTAC                                                                                                                                                      <  2:129707‑M1/36‑1 (MQ=255)
                                                                                                                  tgCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggc                                                                                                             <  2:432997‑M2/74‑29 (MQ=255)
                                                                                                                  tgCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggc                                                                                                             >  1:432997‑M2/1‑46 (MQ=255)
                                                                                                                     tGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccggtacaggcaacacaaggctcaagcgctggc                                                                             >  2:570151‑M2/1‑43 (MQ=255)
                                                                                                                     tGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccggtacaggcaacacaaggctcaagcgctggc                                                                             <  1:570151‑M2/103‑61 (MQ=255)
                                                                                                                     tGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGaaaa                                                                                 >  1:962372/1‑99 (MQ=255)
                                                                                                                     tGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGaaaa                                                                                 <  2:962372/99‑1 (MQ=255)
                                                                                                                     tGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCt                                                                   <  1:214477/113‑1 (MQ=255)
                                                                                                                     tGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCt                                                                   >  2:214477/1‑113 (MQ=255)
                                                                                                                       gCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagca                                                                                                        <  2:432997‑M1/74‑47 (MQ=255)
                                                                                                                       gCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagca                                                                                                        >  1:432997‑M1/1‑28 (MQ=255)
                                                                                                                         ctctTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagacgccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccac                          >  2:302800‑M1/1‑26 (MQ=255)
                                                                                                                         ctctTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAACCTAGCCGGc                          >  2:336377/1‑150 (MQ=255)
                                                                                                                          tctTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaaga                                                                        <  2:720845‑M1/103‑79 (MQ=255)
                                                                                                                          tctTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaaga                                                                        >  1:720845‑M1/1‑25 (MQ=255)
                                                                                                                          tctTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggcttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacaacaccacc                         >  2:1266484‑M1/1‑25 (MQ=255)
                                                                                                                            ttCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccacca                        >  1:1073940‑M1/1‑23 (MQ=255)
                                                                                                                            ttCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccacca                        <  2:1073940‑M1/149‑127 (MQ=255)
                                                                                                                             tCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatc                      <  1:635429‑M1/150‑129 (MQ=255)
                                                                                                                               gcgGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcga                    >  2:1210863‑M1/1‑20 (MQ=255)
                                                                                                                                  ggTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacac                 <  1:1210863‑M1/150‑134 (MQ=255)
                                                                                                                                  ggTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAg                                                                                                     >  2:1295899/1‑66 (MQ=255)
                                                                                                                                  ggTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAg                                                                                                     <  1:1295899/66‑1 (MQ=255)
                                                                                                                                  ggTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGa                 <  2:1358622/150‑1 (MQ=255)
                                                                                                                                   gTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGAc                >  1:1300973/1‑150 (MQ=255)
                                                                                                                                        cccGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccac           >  1:46890‑M1/1‑11 (MQ=255)
                                                                                                                                        cccGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccac           <  1:480704‑M1/150‑140 (MQ=255)
                                                                                                                                        cccGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccac           >  1:78510‑M1/1‑11 (MQ=255)
                                                                                                                                        cccGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccac           <  2:481731‑M2/150‑127 (MQ=255)
                                                                                                                                        cccGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccaccgccacccccac           <  2:222026‑M2/150‑127 (MQ=255)
                                                                                                                                         ccGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccacc          >  1:921092‑M1/1‑10 (MQ=255)
                                                                                                                                         ccGCTCCTACaacgcggtccctcgtaagagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggctgcgcctcaccaccataccaacctcccgccacatcaccaccatcgccacccccacc          >  2:691376‑M1/1‑10 (MQ=255)
                                                                                                                                         ccGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcac                                                        >  2:204209‑M2/1‑23 (MQ=255)
                                                                                                                                         ccGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcac                                                        <  1:204209‑M2/104‑82 (MQ=255)
                                                                                                                                         ccGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgc                                                             >  1:548497‑M2/1‑23 (MQ=255)
                                                                                                                                         ccGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgc                                                             <  2:548497‑M2/99‑77 (MQ=255)
                                                                                                                                         ccGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaagaag          >  2:1390613/1‑150 (MQ=255)
                                                                                                                                         ccGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaagaag          >  1:1065664/1‑150 (MQ=255)
                                                                                                                                          cGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAagaaga         >  1:608270/1‑150 (MQ=255)
                                                                                                                                             tCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccaccagcg      <  1:1293341‑M2/150‑132 (MQ=255)
                                                                                                                                              ccTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatc                      >  1:993162‑M2/1‑18 (MQ=255)
                                                                                                                                                 aCaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccaccagcgggaa  <  1:259272‑M1/150‑149 (MQ=255)
                                                                                                                                                 aCaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccaccagcgggaa  <  1:2768‑M1/150‑149 (MQ=255)
                                                                                                                                                 aCGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGc  <  2:608270/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
CTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGC  >  NC_002947/5506491‑5506785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.