New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5755142	62 (1.180)	5 (0.100)	5/236	NT	7.7%	coding (200/1437 nt)	glnG	two‑component system DNA‑binding response regulator GlnL/GlnG
	?	NC_002947	= 5755156	60 (1.190)					coding (214/1437 nt)	glnG	two‑component system DNA‑binding response regulator GlnL/GlnG

CTGGAAAAAGCCCTGCAACAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTATCGCTGGTCA  >  NC_002947/5755000‑5755291                                                                                                                                                  |                                                                                                                                                      cTGGAAAAAGCCCTGCAACAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGTTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAg                                                                                                                                                >  1:99567/1‑150 (MQ=255)  tGGAAAAAGCCCTGCAACAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGa                                                                                                                                               >  2:668699/1‑150 (MQ=255)  tGGAAAAAGCCCTGCAACAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGa                                                                                                                                               >  1:94293/1‑150 (MQ=255)       ataGCCGTGCAACGTGAAGGCAGGACCACCCAGAGCTTCGACAGTGCATACGGTGTCATTGGGCGCCTGGCACGGAAGCAACCCGACGTGATCATTTCCGACATTCGCATGGCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCTGAGATCcgc                                                                                                                                          <  2:296336/148‑1 (MQ=255)       aaaGCCCTGCAACAGGAAGGCATGACCTTCCAGAGCTTCGACAGCGCAGACGGTGTGATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCcgc                                                                                                                                          <  2:360269/150‑1 (MQ=255)       aaaGCCCTGCAACAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCCTTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCcgc                                                                                                                                          <  2:1189847/150‑1 (MQ=255)       aaaGCCCTGCAACAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCcgc                                                                                                                                          >  1:962831/1‑150 (MQ=255)       aaaGCCCTGCAACAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACAGTCGCATGCATGGCACCAGCGGCCTGGAC‑‑‑CTGCTGGCGCAGATCcgc                                                                                                                                          <  2:133338/150‑1 (MQ=255)         aGCCCTGCAACAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGa                                                                                                                                        >  1:668699‑M2/1‑149 (MQ=255)          gCCCTGCAACAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGag                                                                                                                                       <  1:240360‑M2/150‑3 (MQ=255)            ccTGCAACAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGagca                                                                                                                                     >  2:240360‑M2/1‑146 (MQ=255)              tGCAACAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGagcagc                                                                                                                                   >  2:814445/1‑150 (MQ=255)              tGCAACAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGag                                                                                                                                       >  1:1335239‑M2/1‑144 (MQ=255)              tGCAACAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGag                                                                                                                                       <  2:1335239‑M2/146‑3 (MQ=255)                 aaCAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGACCTGCTGCTcgcggatctgcgccagcagg                                                                                                                                   <  2:303354‑M1/150‑21 (MQ=255)                    aGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCcgc                                                                                                                             <  1:626899/150‑1 (MQ=255)                    aGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCcgc                                                                                                                             <  2:94293/150‑1 (MQ=255)                    aGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCcgc                                                                                                                             >  1:1253666/1‑150 (MQ=255)                    aGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCCAG‑‑‑CTCATGACCCGGATCCGCGGACAGCACCcgc                                                                                                                             >  2:1374288/1‑150 (MQ=255)                          gCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGc                                                                                                                       >  1:962150/1‑150 (MQ=255)                            aTGACCACCCAGAGCTTCGACAGCGCAGACGGGGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCg                                                                                                                     >  1:1138728/1‑150 (MQ=255)                                  accCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGtcatc                                                                                                               <  1:724088/150‑1 (MQ=255)                                   cccAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGa                                                                                                                                        >  2:877086‑M2/1‑123 (MQ=255)                                   cccAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGa                                                                                                                                        <  1:877086‑M2/124‑2 (MQ=255)                                    ccAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGtcatcat                                                                                                             <  2:1253666/150‑1 (MQ=255)                                      ggagCTTCGACAGCGCAGACGGTGTCATGGTGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCTTGCCGGtcatcatca                                                                                                           <  2:99567/149‑1 (MQ=255)                                         gCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGa                                                                                                        >  1:833400/1‑150 (MQ=255)                                               aCAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGccc                                                                                                  >  2:110694/1‑150 (MQ=255)                                               aCAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCCGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGccc                                                                                                  >  2:692023/1‑150 (MQ=255)                                                cAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCa                                                                                                 <  2:962831/150‑1 (MQ=255)                                                      aGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGa                                                                                           <  1:704672/150‑1 (MQ=255)                                                       gACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGAc                                                                                          <  1:1057162/150‑1 (MQ=255)                                                        aCGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGgcg                                                                                                                                                   >  2:694559/1‑92 (MQ=255)                                                        aCGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGgcg                                                                                                                                                   <  1:694559/92‑1 (MQ=255)                                                          ggTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTg                                                                                       >  1:497031/1‑150 (MQ=255)                                                                aTGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCa                                                                                                 >  1:793094/1‑134 (MQ=255)                                                                aTGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCa                                                                                                 <  2:793094/134‑1 (MQ=255)                                                                aTGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAgc                                                                                 >  1:240660/1‑150 (MQ=255)                                                                aTGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCATACCTAGAAAgc                                                                                 >  1:555165/1‑150 (MQ=255)                                                                 tGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAgcg                                                                                >  1:1409409/1‑150 (MQ=255)                                                                         cTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTg                                                                                       <  2:314685/135‑1 (MQ=255)                                                                         cTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTg                                                                                       >  1:314685/1‑135 (MQ=255)                                                                                   aGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAg                                                              >  1:336060/1‑150 (MQ=255)                                                                                    gCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAgg                                                             <  2:240660/150‑1 (MQ=255)                                                                                        cccGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGt                                                         >  2:634450/1‑150 (MQ=255)                                                                                        cccGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGt                                                         <  2:1409409/150‑1 (MQ=255)                                                                                        cccGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGt                                                         <  1:1374288/150‑1 (MQ=255)                                                                                        cccGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTCGCGGATCTGCGCCagcaggtcgag                                                                                                                              <  2:564542‑M2/81‑12 (MQ=255)                                                                                        cccGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTCGCGGATCTGCGCCagcaggtcgag                                                                                                                              >  1:564542‑M2/1‑70 (MQ=255)                                                                                                  tCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGt                                               >  1:415737/1‑150 (MQ=255)                                                                                                   cATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCCTCATGACCGCCCACTCCGACCTGGACAGCGCCGTCGCCTCGTACCAAGCCGGTGCCCTCGAGTa                                              >  2:252922/1‑150 (MQ=255)                                                                                                   cATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTa                                              <  1:657599/150‑1 (MQ=255)                                                                                                        ccGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGc                                         >  1:1179215/1‑150 (MQ=255)                                                                                                         cGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGcc                                        >  1:1377098/1‑150 (MQ=255)                                                                                                             aTTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTcatcatcat                                                                                                          >  2:1373595/1‑80 (MQ=255)                                                                                                             aTTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTcatcatcat                                                                                                          <  1:1373595/80‑1 (MQ=255)                                                                                                                 gCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGcaaa                                >  2:1288329/1‑147 (MQ=255)                                                                                                                  cATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTcgcggatctgcgccagcaggtcga                                                                                                                               <  2:754958‑M1/54‑25 (MQ=255)                                                                                                                  cATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTcgcggatctgcgccagcaggtcga                                                                                                                               >  1:754958‑M1/1‑30 (MQ=255)                                                                                                                   aTGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATtc                              >  1:948408/1‑150 (MQ=255)                                                                                                                   aTGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATtc                              <  1:634450/150‑1 (MQ=255)                                                                                                                     gCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATtcga                            >  2:1000184/1‑150 (MQ=255)                                                                                                                      ccTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATtcgac                           <  2:1377098/150‑1 (MQ=255)                                                                                                                       cTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCg                                                           <  2:1357543/117‑1 (MQ=255)                                                                                                                       cTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCg                                                           >  1:1357543/1‑117 (MQ=255)                                                                                                                       cTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATtcgacg                          >  2:218216/1‑150 (MQ=255)                                                                                                                            aCCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATtcgacgtcgac                     >  1:226977/1‑150 (MQ=255)                                                                                                                            aCCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATtcgacgtcgac                     >  1:283453/1‑150 (MQ=255)                                                                                                                             ccAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATtcgacgtcgacg                    >  2:630026/1‑150 (MQ=255)                                                                                                                                    ccTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTcatcatcat                                                                                                          <  1:475775/57‑1 (MQ=255)                                                                                                                                    ccTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTcatcatcat                                                                                                          >  2:475775/1‑57 (MQ=255)                                                                                                                                     cTCGAC‑‑‑CTGCTggcgcagatccgcgagcaggtcgaggccgctggtgccaggcatgcgaatgtcggaaatgatcacgtcggg                                                                                 <  2:564542‑M1/81‑71 (MQ=255)                                                                                                                                     cTCGAC‑‑‑CTGCTggcgcagatccgcgagcaggtcgaggccgctggtgccaggcatgcgaatgtcggaaatgatcacgtcggg                                                                                 >  1:564542‑M1/1‑11 (MQ=255)                                                                                                                                     cTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTa            >  1:1273884/1‑150 (MQ=255)                                                                                                                                     cTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTa            >  2:142418/1‑150 (MQ=255)                                                                                                                                      tCGAC‑‑‑CTGCTGGCGCAGATCCGCGagcaggtcgaggccgctggtgccaggcatg                                                                                                           >  1:754958‑M2/1‑24 (MQ=255)                                                                                                                                      tCGAC‑‑‑CTGCTGGCGCAGATCCGCGagcaggtcgaggccgctggtgccaggcatg                                                                                                           <  2:754958‑M2/54‑31 (MQ=255)                                                                                                                                      tCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTAt           >  1:1211275/1‑150 (MQ=255)                                                                                                                                      tCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTAt           >  2:1270352/1‑150 (MQ=255)                                                                                                                                          c‑‑‑cTGCTGGCGCAGATCCGCGagcagcaggtcgaggccgctggtgccaggcatgcgaatgtcggaaatgatcacgtcgggttgctgacgtgccaggcgccccatgacaccgtctgcgctgtcgaagctctgggtggtcatgccttcctgtt       <  2:303354‑M2/150‑131 (MQ=255)                                                                                                                                          c‑‑‑cTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTATCGCt       <  2:835616/150‑1 (MQ=255)                                                                                                                                               tGCTcgcggatctgcgccagcaggtcgaggccgctggtgccaggcatgcgaatgtcggaaatgatcacgtcgggttgctgacgtgccaggcgccccatgacaccgtctgcgctgtcgaagctctgggtggtcatgccttcctgttgcagg     >  2:240360‑M1/1‑4 (MQ=255)                                                                                                                                                 cTcgcggatctgcgccagcaggtcgaggccgctggtgccaggcatgcgaatgtcggaaatgatcacgtcgggttgctgacgtgccaggcgccccatgacaccgtctgcgctgtcgaagctctgggtggtcatgccttcctgttgcagggc   <  1:240360‑M1/150‑149 (MQ=255)                                                                                                                                                 cTcgcggatctgcgccagcaggtcgaggccgctggtgccaggcatgcgaatgtcggaaatgatcacgtcgggttgctgacgtgccaggcgccccatgacaccgtctgcgctgtcgaagctctgggtggtcatgccttcctgttgca       <  2:1335239‑M1/146‑145 (MQ=255)                                                                                                                                                 cTcgcggatctgcgccagcaggtcgaggccgctggtgccaggcatgcgaatgtcggaaatgatcacgtcgggttgctgacgtgccaggcgccccatgacaccgtctgcgctgtcgaagctctgggtggtcatgccttcctgttgca       >  1:1335239‑M1/1‑2 (MQ=255)                                                                                                                                                  tcgcggatctgcgccagcaggtcgaggccgctggtgccaggcatgcgaatgtcggaaatgatcacgtcgggttgctgacgtgccaggcgccccatgacaccgtctgcgctgtcgaagctctgggtggtcatgccttcctgttgcagggct  >  1:668699‑M1/1‑1 (MQ=255)                                                                                                                                                  tcgcggatctgcgccagcaggtcgaggccgctggtgccaggcatgcgaatgtcggaaatgatcacgtcgggttgctgacgtgccaggcgccccatgacaccgtctgcgctgtcgaagctctggg                            >  2:877086‑M1/1‑1 (MQ=255)                                                                                                                                                  tcgcggatctgcgccagcaggtcgaggccgctggtgccaggcatgcgaatgtcggaaatgatcacgtcgggttgctgacgtgccaggcgccccatgacaccgtctgcgctgtcgaagctctggg                            <  1:877086‑M1/124‑124 (MQ=255)                                                                                                                                                  |                                                                                                                                                      CTGGAAAAAGCCCTGCAACAGGAAGGCATGACCACCCAGAGCTTCGACAGCGCAGACGGTGTCATGGGGCGCCTGGCACGTCAGCAACCCGACGTGATCATTTCCGACATTCGCATGCCTGGCACCAGCGGCCTCGAC‑‑‑CTGCTGGCGCAGATCCGCGAGCAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTATCGCTGGTCA  >  NC_002947/5755000‑5755291

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.