New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5764475	42 (0.800)	6 (0.120)	4/232	NT	14.0%	coding (400/1317 nt)	ctpA	carboxy‑terminal‑processing protease
	?	NC_002947	= 5764490	34 (0.690)					coding (415/1317 nt)	ctpA	carboxy‑terminal‑processing protease

CCGCATTCGGCCTACCTCGGCCCCGAGGACTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCAAGGTCGGCGAGAAAATCACCCTGACCTTGGTGCGCGACGGCGGCAACCCG  >  NC_002947/5764334‑5764624                                                                                                                                              |                                                                                                                                                      ccGCATTCGGCCTACCTCGGCCCCGAGGACTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGcc                                                                                                                                               >  2:929349/1‑150 (MQ=255)      ttCGGCCTACCTCGGCCCCGAGGACTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGt                                                                                                                                          >  2:835476/1‑150 (MQ=255)         ggCCTACCTCGGCCCCGAGGACTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTCCCTGATCGTTAGGTCTCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCa                                                                                                                                       <  2:397605‑M2/150‑2 (MQ=255)          gCCTACCTCGGCCCCGAGGACTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCag                                                                                                                                      >  1:1077266‑M2/1‑148 (MQ=255)              aCCTCGGCCCCGAGGACTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCaggctg                                                                                                                                  >  2:174993‑M2/1‑144 (MQ=255)              aCCTCGGCCCCGAGGACTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAATAGGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCaggctg                                                                                                                                  >  1:1155893‑M2/1‑144 (MQ=255)              aCCTCGGCCCCGAGGACTTCCAGGAGCTGCAGGAAAGCACCAGCGGAGAGTACGCCGGGTTGGGCTTTTAGGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCaggctg                                                                                                                                  >  1:526183‑M2/1‑144 (MQ=255)                cTCGGCCCCGAGGACTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCGGCCTgcacgccggcacgcgaggctggg                                                                                                                                <  1:176264‑M1/150‑24 (MQ=255)                cTCGGCCCCGAGGACTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTgcacgccggcacgcgaggctggg                                                                                                                                <  2:672410‑M1/150‑24 (MQ=255)                 tCGGCCCCGAGGACTTCAAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTg                                                                                                                               >  1:280008/1‑150 (MQ=255)                   ggCCCCGAGGACTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGAc                                                                                                                             <  2:280008/150‑1 (MQ=255)                         gAGGACTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATc                                                                                                                       >  2:975237/1‑150 (MQ=255)                           ggACTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCT‑GCACGCCGGCACGCgaggctggggtgtcgtcgat                                                                                                                    <  2:486143‑M2/150‑21 (MQ=255)                            gACTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCT‑GCACGCCGGCACGCgaggctggggtgtcgtcgatt                                                                                                                   >  1:486143‑M2/1‑129 (MQ=255)                              cTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCaa                                                                                                                  <  1:250520/150‑1 (MQ=255)                               ttCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGCAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTc                                                                                                                                                      >  1:573667/1‑113 (MQ=255)                               ttCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTc                                                                                                                                                      <  2:573667/113‑1 (MQ=255)                               ttCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCaggctg                                                                                                                                  <  1:50673‑M2/133‑7 (MQ=255)                               ttCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCaggctg                                                                                                                                  >  2:50673‑M2/1‑127 (MQ=255)                                tCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGCCTTGCAGGCTGGTGACCTGATCGTCAAGa                                                                                                                <  1:397605/150‑1 (MQ=255)                                          gCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGgcgc                                                                                                      >  1:1188482/1‑150 (MQ=255)                                             ggAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGACGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGcccc                                                                                                   >  1:1241741/1‑150 (MQ=255)                                                aaGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGAc                                                                                                >  1:232637/1‑150 (MQ=255)                                                         cggcgAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCa                                                                                       <  1:1349134/150‑1 (MQ=255)                                                                      gggCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGaa                                                                          <  2:314129/150‑1 (MQ=255)                                                                        gCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGt                                                                                                                                <  2:751652/94‑1 (MQ=255)                                                                        gCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGt                                                                                                                                >  1:751652/1‑94 (MQ=255)                                                                             gCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCg                                                                   >  1:686558/1‑150 (MQ=255)                                                                                ttGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTgcacgccggcacgcgaggctggg                                                                                                                                <  2:1013768‑M1/86‑24 (MQ=255)                                                                                ttGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTgcacgccggcacgcgaggctggg                                                                                                                                >  1:1013768‑M1/1‑63 (MQ=255)                                                                                ttGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGt                                                                                                                                <  1:1200427/86‑1 (MQ=255)                                                                                ttGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGt                                                                                                                                >  2:1200427/1‑86 (MQ=255)                                                                                        ggCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCATACCATGACCGAAGCCGTCGACAAGATgcgc                                                        <  1:929349/150‑1 (MQ=255)                                                                                          ccAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGAc                                                                              >  1:1012718/1‑126 (MQ=255)                                                                                          ccAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGAc                                                                              <  2:1012718/126‑1 (MQ=255)                                                                                          ccAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGa                                                             >  1:646907/1‑143 (MQ=255)                                                                                          ccAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGa                                                             <  2:646907/143‑1 (MQ=255)                                                                                           cAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAAc                                                                                                           <  1:197052/96‑1 (MQ=255)                                                                                           cAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAAc                                                                                                           >  2:197052/1‑96 (MQ=255)                                                                                                 gACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCAAGGTc                                               >  2:706347/1‑150 (MQ=255)                                                                                                  aCGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCAAGGTCg                                              <  1:835476/150‑1 (MQ=255)                                                                                                    ggCTTCCTCACGGTAGCTACGCCACTCGCCGCCACTCCACACTCGCGCGCCGGCGTGAAGGCTGGAGACCTAATCGACAAGACCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCAAGGTCGGc                                            <  2:299448/150‑1 (MQ=255)                                                                                                      cTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCa                                                                                                                                       <  1:76043‑M2/57‑2 (MQ=255)                                                                                                      cTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCa                                                                                                                                       >  2:76043‑M2/1‑56 (MQ=255)                                                                                                      cTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCaa                                                   >  1:100124/1‑141 (MQ=255)                                                                                                      cTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCaa                                                   <  2:100124/141‑1 (MQ=255)                                                                                                      cTTCATCAAGGCAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTCATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGCCCATGACCGACGACGTCGCCCAGCCGCGCCGCAAGATCGGCga                                          >  2:504945/1‑150 (MQ=255)                                                                                                          atcaAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCAAGGTCGGCGAGaaa                                      >  2:1284062/1‑150 (MQ=255)                                                                                                                gtcgTTTCGCCAATCGACGACCCCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCAAGGTCGGCGAGAAAATCAcc                                <  1:504945/147‑1 (MQ=255)                                                                                                                gTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCAAGGTCGGCGAGAAAATCAcc                                <  2:782150/150‑1 (MQ=255)                                                                                                                   gTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGAcc                                                                                                                            <  2:270236/55‑1 (MQ=255)                                                                                                                   gTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGAcc                                                                                                                            >  1:270236/1‑55 (MQ=255)                                                                                                                        gCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGt                                                                                                                                          <  2:882922/36‑1 (MQ=255)                                                                                                                        gCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGt                                                                                                                                          >  1:882922/1‑36 (MQ=255)                                                                                                                        gCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCAAGGTCGGCGAGAAAATCACCCTGACCtt                        >  1:382182/1‑150 (MQ=255)                                                                                                                           aaTCGACGACACCCCAGCCTcgcgtgccggcgtgcaggctggggtgtcgtcgattggcgaaactaccttgatgaagccgtcttcctggcctacttcaatgcccagcccgccgaactcgccgctggtgctttcctgcagctcctggaagtc                     >  1:486143‑M1/1‑20 (MQ=255)                                                                                                                            aTCGACGACACCCCAGCCTcgcgtgccggcgtgcaggctggggtgtcgtcgattggcgaaactaccttgatgaagccgtcttcctggcctacttcaatgcccagcccgccgaactcgccgctggtgctttcctgcagctcctggaagtcc                    <  2:486143‑M1/150‑132 (MQ=255)                                                                                                                                       cccAGCCTCGCGTGCCGGCGTGCaggctggggtgtcgtcgattggcgaaactaccttgatgaagccgtcttcctggcctacttcaatgcccagcccgccgaactcgccgctggtgctttcctgcagctcctggaagtcctcggggccgag         <  2:672410‑M2/150‑128 (MQ=255)                                                                                                                                       cccAGCCTCGCGTGCCGGCGTGCaggctggggtgtcgtcgattggcgaaactaccttgatgaagccgtcttcctggcctacttcaa                                                                         <  2:1013768‑M2/86‑64 (MQ=255)                                                                                                                                       cccAGCCTCGCGTGCCGGCGTGCaggctggggtgtcgtcgattggcgaaactaccttgatgaagccgtcttcctggcctacttcaa                                                                         >  1:1013768‑M2/1‑23 (MQ=255)                                                                                                                                       cccAGCCTCGCGTGCCGGCGTGCaggccggggtgtcgtcgattggcgaaactaccttgatgaagccgtcttcctggcctacttcaatgcccagcccgccgaactcgccgctggtgctttcctgcagctcctggaagtcctcggggccgag         <  1:176264‑M2/150‑128 (MQ=255)                                                                                                                                       cccAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCAAgg                                                 >  2:605689/1‑110 (MQ=255)                                                                                                                                       cccAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCAAgg                                                 <  1:605689/110‑1 (MQ=255)                                                                                                                                         cAGCCTgcacgccggcacgcgaggctggggtgtcgtcgattggcgaaactaccttgatgaagccgtcttcctggcctacttcaatgcccagcccgccgaactcgccgctggtgctttcctgcagctcctggaagtcctcggggccgaggt       >  2:174993‑M1/1‑6 (MQ=255)                                                                                                                                         cAGCCTgcacgccggcacgcgaggctggggtgtcgtcgattggcgaaactaccttgatgaagccgtcttcctggcctacttcaatgcccagcccgccgaactcgccgctggtgctttcctgcagctcctggaa                        >  2:50673‑M1/1‑6 (MQ=255)                                                                                                                                         cAGCCTgcacgccggcacgcgaggctggggtgtcgtcgattggcgaaactaccttgatgaagccgtcttcctggcctacttcaatgcccagcccgccgaactcgccgctggtgctttcctgcagctcctggaa                        <  1:50673‑M1/133‑128 (MQ=255)                                                                                                                                         cAGCCTgcacgccggcacgcgaggctggggtgtcgtcgattggcgaaactaccttgatgaagccgtcttcctggcctacttcaatgcccagcccgccctattcgccgctggtgctttcctgcagctcctggaagtcctcggggccgaggt       >  1:1155893‑M1/1‑6 (MQ=255)                                                                                                                                         cAGCCTgcacgccggcacgcgaggctggggtgtcgtcgattggcgaaactaccttgatgaagccgtcttcctggcctacctaaaagcccaacccggcgtactctccgctggtgctttcctgcagctcctggaagtcctcggggccgaggt       >  1:526183‑M1/1‑6 (MQ=255)                                                                                                                                         cAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCAAGGTCGGCGAGAAAATCACCCTGACCTTGGTGCGCGAcgg            <  1:287327/145‑1 (MQ=255)                                                                                                                                         cAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCAAGGTCGGCGAGAAAATCACCCTGACCTTGGTGCGCGAcgg            >  2:287327/1‑145 (MQ=255)                                                                                                                                            ccTCGCGTGCCGGCGTGCAGGCTGCTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGAGCGGCAAGGTCGGAGAGAACAGCACCCTGACCCTGGGGCGCGACGGCGGCAAcc    >  1:338982/1‑150 (MQ=255)                                                                                                                                             cTgcacgccggcacgcgaggctggggtgtcgtcgattggcgaaactaccttgatgaagccgtcttcctggcctacttcaatgcccagcccgccgaactcgccgctggtgctttcctgcagctcctggaagtcctcggggccgaggtaggc   >  1:1077266‑M1/1‑2 (MQ=255)                                                                                                                                              tgcacgccggcacgcgaggctggggtgtcgtcgattggcgaaactaccttgatgaag                                                                                               >  2:76043‑M1/1‑1 (MQ=255)                                                                                                                                              tgcacgccggcacgcgaggctggggtgtcgtcgattggcgaaactaccttgatgaag                                                                                               <  1:76043‑M1/57‑57 (MQ=255)                                                                                                                                              tgcacgccggcacgcgaggctggggtgtcgtcgattggagacctaacgatcagggagccgtcttcctggcctacttcaatgcccagcccgccgaactcgccgctggtgctttcctgcagctcctggaagtcctcggggccgaggtaggcc  <  2:397605‑M1/150‑150 (MQ=255)                                                                                                                                              |                                                                                                                                                      CCGCATTCGGCCTACCTCGGCCCCGAGGACTTCCAGGAGCTGCAGGAAAGCACCAGCGGCGAGTTCGGCGGGCTGGGCATTGAAGTAGGCCAGGAAGACGGCTTCATCAAGGTAGTTTCGCCAATCGACGACACCCCAGCCTCGCGTGCCGGCGTGCAGGCTGGTGACCTGATCGTCAAGATCAACGGCGCCCCGACCCGCGGCCAGACCATGACCGAAGCCGTCGACAAGATGCGCGGCAAGGTCGGCGAGAAAATCACCCTGACCTTGGTGCGCGACGGCGGCAACCCG  >  NC_002947/5764334‑5764624

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.