New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 578495253 (1.010)6 (0.120) 6/228 NT 11.0% intergenic (+62/‑101) kefA/PP_5068 intermediate mechanosensitive channel protein/hypothetical protein
?NC_002947 = 5784997 48 (0.990)intergenic (+107/‑56) kefA/PP_5068 intermediate mechanosensitive channel protein/hypothetical protein

GTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGC  >  NC_002947/5784807‑5785093
                                                                                                                                                  |                                                                                                                                              
gtgtTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAAc                                                                                                                                            >  2:1072109/1‑150 (MQ=255)
 tgtTCCTGATGGATGCGAAGGGCAGCAAGCAGAGACTGACACGTGGGAATGATGCAATATCGGATGGCACTATTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAAcc                                                                                                                                           <  1:1027415/150‑1 (MQ=255)
   ttCCTGAGGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCg                                                                                                                                         <  1:310199/150‑1 (MQ=255)
     ccTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCt                                                                                                                                       <  1:967274/150‑1 (MQ=255)
       tGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTcc                                                                                                                                     <  1:1072109/150‑1 (MQ=255)
              tgCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCg                                                                                                                              >  2:332645/1‑150 (MQ=255)
                 gAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGgc                                                                                                                           >  1:84500/1‑150 (MQ=255)
                 gAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGgc                                                                                                                           >  2:1277248/1‑150 (MQ=255)
                 aggtggCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGTCTTCGAGAGCTTCTCCCGCGTTCGCGTGTAAACCCGCTCCTAAATCTGgc                                                                                                                           >  1:916421/5‑150 (MQ=255)
                   aGGGCAGCAAGCAGCAATTGATTCCGCTGGAACAGCCAAAATCGGATGGTTTGGCGTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGTCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGgcgc                                                                                                                         <  1:1156302/150‑1 (MQ=255)
                               agcaaTTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTgg                                                                                                             <  2:903027/150‑1 (MQ=255)
                               agcaaTTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTgg                                                                                                             <  1:972708/150‑1 (MQ=255)
                                      gATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGgggcggg                                                                                                      >  1:986227/1‑150 (MQ=255)
                                           cGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCtgt                                                                                                               <  2:248241/136‑1 (MQ=255)
                                           cGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGATCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCtgt                                                                                                               >  1:248241/1‑136 (MQ=255)
                                                    cAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGaaa                                                                                         <  1:332645/150‑1 (MQ=255)
                                                                    gCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGccc                                                                        <  1:357791/150‑1 (MQ=255)
                                                                      aCTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGTGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCa                                                                      <  1:316340/150‑1 (MQ=255)
                                                                       cTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTAGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCAt                                                                     >  1:33093/1‑150 (MQ=255)
                                                                          cTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTgg                                                                  <  1:1104197/150‑1 (MQ=255)
                                                                                    aaTGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTgagcccgcccccacagcggccagcgcccgatttaggagcgggtttacc                                                                                                >  2:43082‑M1/1‑63 (MQ=255)
                                                                                    aaTGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTgagcccgcccccacagcggccagcgcccgatttaggagcgggtttacc                                                                                                <  1:43082‑M1/111‑49 (MQ=255)
                                                                                       gggCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAg                                                     <  1:1423724/150‑1 (MQ=255)
                                                                                       gggCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAg                                                     <  2:84500/150‑1 (MQ=255)
                                                                                         gCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCaa                                                                               <  2:1380485/122‑1 (MQ=255)
                                                                                         gCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGa                                                   >  2:744059/1‑150 (MQ=255)
                                                                                         gCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCCCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGa                                                   >  1:662749/1‑150 (MQ=255)
                                                                                         gCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCACTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCaa                                                                               >  1:1380485/1‑122 (MQ=255)
                                                                                           tCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGc                                                 >  1:983256/1‑150 (MQ=255)
                                                                                            cGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGa                                                   >  2:1244897/1‑147 (MQ=255)
                                                                                            cGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGa                                                   <  1:1244897/147‑1 (MQ=255)
                                                                                              aaTACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGt                                              >  2:537675/1‑150 (MQ=255)
                                                                                                   tttATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCTTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGgggcg                                                                                                        >  2:349165/1‑88 (MQ=255)
                                                                                                   tttATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCTTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGgggcg                                                                                                        <  1:349165/88‑1 (MQ=255)
                                                                                                   tttATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTgagcccgcccccacagcggccagcgcccgatttaggagcgggtttacccgcgaa                                                                                          <  2:794522‑M1/102‑55 (MQ=255)
                                                                                                   tttATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTgagcccgcccccacagcggccagcgcccgatttaggagcgggtttacccgcgaa                                                                                          >  1:794522‑M1/1‑48 (MQ=255)
                                                                                                   tttATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGGCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGt                                         >  2:1026762/1‑150 (MQ=255)
                                                                                                   tttATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCAcc                                                              <  1:1354855/129‑1 (MQ=255)
                                                                                                   tttATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCAcc                                                              >  2:1354855/1‑129 (MQ=255)
                                                                                                   tttATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGt                                         >  1:259517/1‑150 (MQ=255)
                                                                                                       ttGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGaaa                                     <  1:1277248/150‑1 (MQ=255)
                                                                                                       ttGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGaaa                                     <  1:142424/150‑1 (MQ=255)
                                                                                                       ttGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGaaa                                     >  1:275570/1‑150 (MQ=255)
                                                                                                            tgCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTgagcccgcccccacagcggccagcgcccgatttaggagcgg                                                                                                       <  1:192279‑M1/80‑42 (MQ=255)
                                                                                                            tgCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTgagcccgcccccacagcggccagcgcccgatttaggagcgg                                                                                                       >  2:192279‑M1/1‑39 (MQ=255)
                                                                                                            tgCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCaa                                                      >  1:547819/1‑128 (MQ=255)
                                                                                                            tgCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCaa                                                      <  2:547819/128‑1 (MQ=255)
                                                                                                            tgCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCt                                >  1:733033/1‑150 (MQ=255)
                                                                                                              cAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCg                              >  1:107279/1‑150 (MQ=255)
                                                                                                                      cTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCAACGCACCCGCCATCACCAGAAAGGTCATAGGCACAGATTCCAAGGAGCAGTCCCGTGAAAGCCCCCCACCAAccc                      >  1:878934/1‑148 (MQ=255)
                                                                                                                        gCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCAc                    >  1:942626/1‑150 (MQ=255)
                                                                                                                           aGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCtt                 <  1:537675/150‑1 (MQ=255)
                                                                                                                            gggCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTc                <  2:259517/150‑1 (MQ=255)
                                                                                                                            gggCTTCGCCCTCGTTCGCGGCTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCACAACCACCTCTCCTTc                <  2:733033/150‑1 (MQ=255)
                                                                                                                              gCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGa              <  2:986227/150‑1 (MQ=255)
                                                                                                                                  cGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCAGTGAAAGCCCTCGACCAACTCACCTTCGACAAc          <  1:744059/150‑1 (MQ=255)
                                                                                                                                     ccTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGc       >  1:817929/1‑150 (MQ=255)
                                                                                                                                        cGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTc    <  2:977402/150‑1 (MQ=255)
                                                                                                                                          ttCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCacccgcgaacgagggcgaagccctcgcagccattttgcacacaataaa                                                   >  1:794522‑M2/1‑54 (MQ=255)
                                                                                                                                          ttCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCacccgcgaacgagggcgaagccctcgcagccattttgcacacaataaa                                                   <  2:794522‑M2/102‑49 (MQ=255)
                                                                                                                                          ttCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTcgc  >  2:1171428/1‑150 (MQ=255)
                                                                                                                                             gcgGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGa                             <  2:491508/120‑1 (MQ=255)
                                                                                                                                             gcgGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGa                             >  1:491508/1‑120 (MQ=255)
                                                                                                                                                ggTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCacccgcgaacgagggcgaagccctcgcagccattttgcacacaataaagtattcgagcccatt                                    >  2:43082‑M2/1‑48 (MQ=255)
                                                                                                                                                ggTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCacccgcgaacgagggcgaagccctcgcagccattttgcacacaataaagtattcgagcccatt                                    <  1:43082‑M2/111‑64 (MQ=255)
                                                                                                                                                  |                                                                                                                                              
GTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGC  >  NC_002947/5784807‑5785093

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.