New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5947161 =50 (0.950)14 (0.290) 13/226 NT 22.4% intergenic (‑97/+109) ubiD/rho 3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
?NC_002947 5947230 = 51 (1.060)intergenic (‑166/+40) ubiD/rho 3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho

TCGCCGCGCTGTTCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGT  >  NC_002947/5947012‑5947308
                                                                                                                                                     |                                                                                                                                                     
tCGCCGCGCTGTTCCAGGCCACGGATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATc                                                                                                                                                       >  2:1172987/1‑150 (MQ=255)
caagctgctgcacccgatggacgaaatcgctgccatcgagttcctggtcgacaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggc                                                                                                                                                       <  2:1152149‑M1/1‑1 (MQ=255)
 aagctgctgcacccgatggacgaaatcgctgccatcgagttcctggtcgacaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggcc                                                                                                                                                      <  1:267369‑M1/2‑1 (MQ=255)
  gccgcGCTGTTCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATccc                                                                                                                                                     >  1:1261998/1‑150 (MQ=255)
   gctgctgcacccgatggacgaaatcgctgccatcgagttcctggtcgacaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCt                                                                                                                                                    >  1:164021‑M1/147‑150 (MQ=255)
      gctgcacccgatggacgaaatcgctgccatcgagttcctggtcgacaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTcg                                                                                                                                                 <  2:1390976‑M1/7‑1 (MQ=255)
       ctgcacccgatggacgaaatcgctgccatcgagttcctggtcgacaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTc                                                                                                                                                  >  2:634705‑M1/143‑148 (MQ=255)
       ctgcacccgatggacgaaatcgctgccatcgagttcctggtcgacaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTc                                                                                                                                                  <  1:634705‑M1/6‑1 (MQ=255)
         gcacccgatggacgaaatcgctgccatcgagttcctggtcgacaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattgcggccgccttgcggCCCTTCGCgg                                                                                                                                              >  1:404378‑M1/141‑150 (MQ=255)
               aGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGccc                                                                                                                                      >  1:1181387/1‑150 (MQ=255)
                         tGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTATCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATTCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACaa                                                                                                                            <  2:464347/150‑1 (MQ=255)
                              tCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGcc                                                                                                                       <  1:227264/150‑1 (MQ=255)
                                  gcAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTATAGTT‑‑ATTCCCGCTCCTACAAGGGCCGCaa                                                                                                                   >  1:714354/1‑150 (MQ=255)
                                  atcgagttcctggtcgacaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCaa                                                                                                                   <  1:681545‑M1/35‑1 (MQ=255)
                                       gttcctggtcgacaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCGGGCAAGCCCGCTCCTACAAGGGCCGCAATGa                                                                                                                >  1:155868‑M1/111‑150 (MQ=255)
                                         gcgATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCtg                                                                                                            >  1:1149707/1‑150 (MQ=255)
                                            gtacgggatggaGGAGCCGGGTGGTGGCGGTATGGGTGGGGGTGCAGAGTGTGGGGCCGTTCGGGCCTGGTTTGGGGGTGAAAATGCGTTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGc                                                                                                         <  2:1185822/143‑1 (MQ=255)
                                                cgacaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCGGGCAAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAg                                                                                                       >  1:1087213‑M1/102‑150 (MQ=255)
                                                  acaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgctttgcatCCCTTCGCGG‑‑AAGCCCGCTCCTACAAg                                                                                                                           <  2:1175519‑M1/27‑1 (MQ=255)
                                                  acaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgctttgcatCCCTTCGCGG‑‑AAGCCCGCTCCTACAAg                                                                                                                           >  1:1175519‑M1/100‑126 (MQ=255)
                                                  acaagctcaagcagaccaagaccaacgatgagttcttcctgtagctgcagcgcaagtaagcgagcgtttcgggctggattgattggggccgccttgcggCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGc                                                                                                   <  1:248615‑M1/51‑1 (MQ=255)
                                                       aGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCt                                                                                              <  1:107447/150‑1 (MQ=255)
                                                        tcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCtt                                                                                             <  2:646077‑M1/57‑1 (MQ=255)
                                                         gAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGcc                                                                                                                       <  1:746069/123‑1 (MQ=255)
                                                         gAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGcc                                                                                                                       >  2:746069/1‑123 (MQ=255)
                                                            ccTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGccc                                                                                         >  2:892069/1‑150 (MQ=255)
                                                             cTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGcc                                                                                                                       <  2:702291/119‑1 (MQ=255)
                                                             cTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGcc                                                                                                                       >  1:702291/1‑119 (MQ=255)
                                                              tCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCtgtg                                                                                                          >  1:500886/1‑131 (MQ=255)
                                                              tCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCtgtg                                                                                                          <  2:500886/131‑1 (MQ=255)
                                                              agaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCGGGCAAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAg                                                                                                    <  2:369887‑M1/52‑1 (MQ=255)
                                                              agaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCGGGCAAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAg                                                                                                    >  1:369887‑M1/88‑139 (MQ=255)
                                                                gtgtTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGa                                                                                     >  1:737475/1‑150 (MQ=255)
                                                                accaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCgg                                                                                                                                              <  2:612805‑M1/10‑1 (MQ=255)
                                                                accaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCgg                                                                                                                                              >  1:612805‑M1/86‑95 (MQ=255)
                                                                 ccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGaa                                                                                    >  2:248615‑M1/85‑150 (MQ=255)
                                                                  gtTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTAGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAg                                                                                   <  2:1261998/150‑1 (MQ=255)
                                                                    tGGGCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGCTTGGGGGTGAAAATGCATTGGTGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAggg                                                                                 <  2:498222/150‑1 (MQ=255)
                                                                      gCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGcc                                                                               >  1:915249/1‑150 (MQ=255)
                                                                         aacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCa                                                                            >  1:646077‑M1/77‑150 (MQ=255)
                                                                          tATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCaa                                                                           >  2:236732/1‑150 (MQ=255)
                                                                             cggtcggGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAggc                                                                        <  2:1354863/150‑1 (MQ=255)
                                                                             atgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAggc                                                                        >  2:681545‑M1/73‑150 (MQ=255)
                                                                               gtcggGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATTCCTTCGACA‑‑ATGCCATGGCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGAGAAGGTGCGCAAggcgg                                                                      >  1:1390976/1‑150 (MQ=255)
                                                                               gtcggGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAggcgg                                                                      >  2:584372/1‑150 (MQ=255)
                                                                                 cggGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGcc                                                                    <  1:1172987/150‑1 (MQ=255)
                                                                                  ggggTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCa                                                                                                        <  1:1060618/113‑1 (MQ=255)
                                                                                  ggggTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCa                                                                                                        >  2:1060618/1‑113 (MQ=255)
                                                                                   gggTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGcccc                                                                  <  2:647738/150‑1 (MQ=255)
                                                                                   gggTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AACCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGACGGccac                                                                  >  2:865343/1‑148 (MQ=255)
                                                                                     ttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCgg                                                                                                                                              >  1:1070898‑M1/65‑74 (MQ=255)
                                                                                     ttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCgg                                                                                                                                              <  2:1070898‑M1/10‑1 (MQ=255)
                                                                                     gTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCtg                                                                                                            <  1:694284/106‑1 (MQ=255)
                                                                                     gTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCtg                                                                                                            >  2:694284/1‑106 (MQ=255)
                                                                                     gTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCCTTGCGGcccttc                                                                <  2:1181387/150‑4 (MQ=255)
                                                                                     gTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCcaa                                                                >  1:495902/1‑150 (MQ=255)
                                                                                      tGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCcaat                                                               <  1:892069/150‑1 (MQ=255)
                                                                                         agagTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAgg                                                                         <  2:1265820/137‑1 (MQ=255)
                                                                                         agagTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAgg                                                                         >  1:1265820/1‑137 (MQ=255)
                                                                                         agagTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGAGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCGGCAAGGCGGCCCcaatcaa                                                            >  2:267369/1‑150 (MQ=255)
                                                                                               tAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGc                                                      <  1:236732/150‑1 (MQ=255)
                                                                                                aGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGcc                                                     <  1:620089/150‑1 (MQ=255)
                                                                                                       ttCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAAcg                                              <  2:622228/150‑1 (MQ=255)
                                                                                                               ttGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACATGTGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTa                                      <  2:754891/150‑1 (MQ=255)
                                                                                                               ttGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGTGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTa                                      >  2:1246583/1‑150 (MQ=255)
                                                                                                               gagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAgg                                                                                  <  2:1405481‑M1/68‑1 (MQ=255)
                                                                                                               gagcgtttcaggctggattgattggggccgccttgcggCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAgg                                                                                  >  1:1405481‑M1/39‑106 (MQ=255)
                                                                                                                 gtatGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACt                                    >  1:1420779/4‑150 (MQ=255)
                                                                                                                      ggggTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTgcgc                               <  2:737475/150‑1 (MQ=255)
                                                                                                                           gAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAg                                                                                   <  1:1354085/93‑1 (MQ=255)
                                                                                                                           gAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAg                                                                                   >  2:1354085/1‑93 (MQ=255)
                                                                                                                           gAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCAt                          <  2:495902/150‑1 (MQ=255)
                                                                                                                             aaaTGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCaatcaatc                                                          <  2:462137/116‑1 (MQ=255)
                                                                                                                             aaaTGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCaatcaatc                                                          >  1:462137/1‑116 (MQ=255)
                                                                                                                                tGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCATGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACa                     <  1:842460/150‑1 (MQ=255)
                                                                                                                                        ggCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACACGGGCTGAAATGATCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAAc             <  1:865343/150‑1 (MQ=255)
                                                                                                                                           cGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCa          >  2:152510/1‑150 (MQ=255)
                                                                                                                                                 gCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGttg    <  1:584372/150‑1 (MQ=255)
                                                                                                                                                 ccATCCCTGGGCGG‑‑AAGCCCGCCCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGttg    <  2:1149707/149‑1 (MQ=255)
                                                                                                                                                   aTCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCAGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGttggt  >  1:186084/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TCGCCGCGCTGTTCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCGTTGGT  >  NC_002947/5947012‑5947308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.