New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5965051	80 (1.520)	6 (0.120)	6/236	NT	6.7%	coding (189/696 nt)	had	(S)‑2‑haloacid dehalogenase
	?	NC_002947	= 5965075	90 (1.790)					coding (213/696 nt)	had	(S)‑2‑haloacid dehalogenase

ACACCGCGCCGGTGATTGCCACCGCGGAAGTCGTGCTGCGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGCCACCAGGTGGAGATCTTCCCAGAGGTGCAGCC  >  NC_002947/5964909‑5965200                                                                                                                                               |                                                                                                                                                      acacCGCGCCGGTGATTGCCACCGCGGAAGTCGTGCTGCGCGACTGTCTCGAGGCCAACGCACCAACCCTCGGAAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCa                                                                                                                                                <  1:1163766/150‑1 (MQ=255)   acCGCGCCGGTGATTGCCACCGCGGAAGTCGTGCTGCGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAgc                                                                                                                                              >  2:1139713/1‑150 (MQ=255)          cGGTGATTGCCACCGCGGAAGTCGTGCTGCGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTgc                                                                                                                                       >  1:54397/1‑150 (MQ=255)            gTGATTGCCACCGCGGAAGTCGTGCTGCGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTgcgc                                                                                                                                     >  1:1323142/1‑150 (MQ=255)            gTGATTGCCACCGCGGAAGTCGTGCTGCGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTgcgc                                                                                                                                     >  1:423557/1‑150 (MQ=255)              gATTGCCACCGCGGAAGTCGTGCTGCGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAg                                                                                                                                   <  2:54397/150‑1 (MQ=255)               aTTGCCACCGCGGAAGTCGTGCTGCGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCa                                                                                                                                                <  2:334166/136‑1 (MQ=255)               aTTGCCACCGCGGAAGTCGTGCTGCGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCa                                                                                                                                                >  1:334166/1‑136 (MQ=255)                    cACCGCGGAAGTCGTGCTGCGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACgcgcctgcgcagggcgctgatgcggt                                                                                                                             <  1:1037446‑M1/150‑27 (MQ=255)                          ggAAGTCGTGCTGCGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGtt                                                                                                                       >  1:486232/1‑150 (MQ=255)                            aaGTCGTGCTGCGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTc                                                                                                                     <  1:925315/150‑1 (MQ=255)                               tCGTGCTGCGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACgcgcctgcgcagggcgctgatgcggtgcttgaggccg                                                                                                                  <  1:420702‑M1/150‑38 (MQ=255)                                     tgcGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATg                                                                                                                  <  2:561275/144‑1 (MQ=255)                                     tgcGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATg                                                                                                                  >  1:561275/1‑144 (MQ=255)                                       cgcgACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGaa                                                                                                          <  1:732505/150‑1 (MQ=255)                                          gACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCAGGCCCTTGAagag                                                                                                       <  2:1059706/150‑1 (MQ=255)                                              ggCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCg                                                                                                   <  1:1368181/150‑1 (MQ=255)                                               gCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCgg                                                                                                  <  1:188838/150‑1 (MQ=255)                                               gCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCgg                                                                                                  >  1:982164/1‑150 (MQ=255)                                                 tCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCt                                                                                                              >  2:979300/1‑136 (MQ=255)                                                 tCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCt                                                                                                              <  1:979300/136‑1 (MQ=255)                                                 tCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCt                                                                                                >  2:27906/1‑150 (MQ=255)                                                    cgaccAACGCACCAACCCTCGCCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACa                                                                                             <  2:275107/147‑1 (MQ=255)                                                    aGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACa                                                                                             <  1:931812/150‑1 (MQ=255)                                                      gCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGc                                                                                           >  2:1113493/1‑150 (MQ=255)                                                        cAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGa                                                                                         >  1:1368534/1‑150 (MQ=255)                                                         aaCGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCACAAGCACCGCATCAGCGCGCTGCCCAGTCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGaa                                                                                        <  1:27906/150‑1 (MQ=255)                                                         aaCGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCACGGCCTCAAGCACCGCATAAGCCCCCTGGGGCCGCTCGGGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGaa                                                                                        >  1:319290/1‑150 (MQ=255)                                                          aCGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTc                                                                                                                     <  1:975786/120‑1 (MQ=255)                                                          aCGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTc                                                                                                                     >  2:975786/1‑120 (MQ=255)                                                          aCGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAAc                                                                                       >  2:1384616/1‑150 (MQ=255)                                                              aCCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAgca                                                                                   >  2:67727/1‑150 (MQ=255)                                                              aCCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAgca                                                                                   >  2:1181991/1‑150 (MQ=255)                                                              aCCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAgca                                                                                   >  2:809387/1‑150 (MQ=255)                                                                cAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACgcgcctgcgcagggcgctgatgcgg                                                                                                                              <  1:915556‑M1/105‑26 (MQ=255)                                                                cAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACgcgcctgcgcagggcgctgatgcgg                                                                                                                              >  2:915556‑M1/1‑80 (MQ=255)                                                                cAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAgcacg                                                                                 <  1:1245859/150‑1 (MQ=255)                                                                 aaCCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCTTGGAAGAGGTCGGCTACAGCGAACAgcacgc                                                                                <  1:1341412/150‑1 (MQ=255)                                                                     cTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAg                                                                            <  2:982164/150‑1 (MQ=255)                                                                     cTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAg                                                                            >  2:1349837/1‑150 (MQ=255)                                                                      tCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGcc                                                                                                                >  2:1011033/1‑113 (MQ=255)                                                                      tCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGcc                                                                                                                <  1:1011033/113‑1 (MQ=255)                                                                            gCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTgg                                                                     >  2:1414451/1‑150 (MQ=255)                                                                                gCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCaa                                                                 <  1:1139713/150‑1 (MQ=255)                                                                                 ccGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAAc                                                                >  1:1104227/1‑150 (MQ=255)                                                                                       gAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGt                                                                                                                        >  2:1173831/1‑88 (MQ=255)                                                                                       gAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGt                                                                                                                        <  1:1173831/88‑1 (MQ=255)                                                                                         acacCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCtt                                                        <  1:1384616/150‑1 (MQ=255)                                                                                           acCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACgcgcctgcgcagggcgctgatgcggtgcttga                                                                                                                       >  1:406979‑M1/1‑53 (MQ=255)                                                                                           acCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACgcgcctgcgcagggcgctgatgcggtgcttga                                                                                                                       <  2:406979‑M1/85‑33 (MQ=255)                                                                                           acCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCg                                                      >  2:1382605/1‑150 (MQ=255)                                                                                            ccTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCCTGCCCCGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGa                                                     <  2:486232/150‑1 (MQ=255)                                                                                             cTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGaa                                                    <  2:717898/150‑1 (MQ=255)                                                                                             cTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGaa                                                    >  2:1034787/1‑150 (MQ=255)                                                                                             cTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGaa                                                    <  2:423557/150‑1 (MQ=255)                                                                                             cTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGaa                                                    >  1:717898/1‑150 (MQ=255)                                                                                              tGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAg                                                   <  1:925643/150‑1 (MQ=255)                                                                                                ttCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGTAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGaa                                                             <  1:1268847/138‑1 (MQ=255)                                                                                                ttCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGTAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGaa                                                             >  2:1268847/1‑138 (MQ=255)                                                                                                    ccATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTcc                                             <  1:1034787/150‑1 (MQ=255)                                                                                                    ccATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTcc                                             <  1:1349837/150‑1 (MQ=255)                                                                                                     cATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCt                                            >  1:1062899/1‑150 (MQ=255)                                                                                                     cATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCt                                            <  2:1368534/150‑1 (MQ=255)                                                                                                       tCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGc                                          <  1:3934/150‑1 (MQ=255)                                                                                                             ggcgcCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGccc                                    <  2:884158/149‑1 (MQ=255)                                                                                                              gcgcCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCg                                   <  2:1323142/150‑1 (MQ=255)                                                                                                                  cTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGccac                               >  1:164890/1‑150 (MQ=255)                                                                                                                   tGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGccacc                              >  2:336250/1‑150 (MQ=255)                                                                                                                    ggagCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGTCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGccacca                             <  2:325197/147‑1 (MQ=255)                                                                                                                    ggTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGccacca                             <  1:1414451/150‑1 (MQ=255)                                                                                                                      tGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGCCACCAgg                           >  1:1248991/1‑150 (MQ=255)                                                                                                                          aGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGCCACCAGGTGga                       <  1:655954/150‑1 (MQ=255)                                                                                                                           gCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGCCACCAGGTGgag                      >  1:1265811/1‑150 (MQ=255)                                                                                                                           gCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGCCACCAGGTGgag                      >  1:666828/1‑150 (MQ=255)                                                                                                                                gCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGCCACCAGGTGGAGATCtt                 >  2:362669/1‑150 (MQ=255)                                                                                                                                  ccGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGgc                                                                          >  1:1243326/1‑91 (MQ=255)                                                                                                                                  ccGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGgc                                                                          <  2:1243326/91‑1 (MQ=255)                                                                                                                                   cGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCgtgcttgaggccgggctctgcttgcaccaggcgctcgcggatggcgaacaggtgttccaccggcacgctgccgagggttggtgcgttggcctcgagccagtcgcgcagcacga              <  1:420702‑M2/150‑114 (MQ=255)                                                                                                                                   cGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGCCACCAGGTGGAGATCTTccc              <  1:1113493/150‑1 (MQ=255)                                                                                                                                        tCAAGCACCGCATCAGCGCCCTGCGCAGGCGCgtgcttgaggccgggctctgcttgcaccaggcgctcgcggatggcgaacaggt                                                                          >  1:406979‑M2/1‑32 (MQ=255)                                                                                                                                        tCAAGCACCGCATCAGCGCCCTGCGCAGGCGCgtgcttgaggccgggctctgcttgcaccaggcgctcgcggatggcgaacaggt                                                                          <  2:406979‑M2/85‑54 (MQ=255)                                                                                                                                        tCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTgg                                                                     <  2:978096/90‑1 (MQ=255)                                                                                                                                        tCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTgg                                                                     >  1:978096/1‑90 (MQ=255)                                                                                                                                        tCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAgtg                                                 <  2:978761/110‑1 (MQ=255)                                                                                                                                        tCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAgtg                                                 >  1:978761/1‑110 (MQ=255)                                                                                                                                         cAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGaa                                                    >  2:1055392/1‑106 (MQ=255)                                                                                                                                         cAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGaa                                                    <  1:1055392/106‑1 (MQ=255)                                                                                                                                          aaGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGCCACCAgg                           <  1:433745/130‑1 (MQ=255)                                                                                                                                          aaGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGCCACCAgg                           >  2:433745/1‑130 (MQ=255)                                                                                                                                           aGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGCCACCAGGTGGAGATCTTCCCAGAGGTGc      >  2:76383/1‑150 (MQ=255)                                                                                                                                             cACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGCCACCAGGTGGAGATCTTCCCAGAGGTGCAg    >  1:720467/1‑150 (MQ=255)                                                                                                                                              aCCGCATCAGCGCCCTGCGCAGGCGCgtgcttgaggccgggctctgcttgcaccaggcgctcgcggatggcgaacaggtgttccaccggcacgctgccgagggttggtgcgttggcctcgagccagtcgcgcagcacgacttccgcggtg   <  1:1037446‑M2/150‑125 (MQ=255)                                                                                                                                               ccGCATCAGCGCCCTGCGCAGGCGCgtgcttgaggccgggctctgcttgcaccaggcgctcgcggatggcgaacaggtgttccaccggcacgctgccgagggttg                                               <  1:915556‑M2/105‑81 (MQ=255)                                                                                                                                               ccGCATCAGCGCCCTGCGCAGGCGCgtgcttgaggccgggctctgcttgcaccaggcgctcgcggatggcgaacaggtgttccaccggcacgctgccgagggttg                                               >  2:915556‑M2/1‑25 (MQ=255)                                                                                                                                               ccGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAgtgt                                                >  1:418068/1‑104 (MQ=255)                                                                                                                                               ccGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAgtgt                                                <  2:418068/104‑1 (MQ=255)                                                                                                                                               ccGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGCCACCAGGTGGAGATCTTCCCAGAGGTGCAGcc  <  1:336250/150‑1 (MQ=255)                                                                                                                                               ccGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGCCACCAGGTGGAGATCTTCCCAGAGGTGCAGcc  >  1:1075125/1‑150 (MQ=255)                                                                                                                                               |                                                                                                                                                      ACACCGCGCCGGTGATTGCCACCGCGGAAGTCGTGCTGCGCGACTGGCTCGAGGCCAACGCACCAACCCTCGGCAGCGTGCCGGTGGAACACCTGTTCGCCATCCGCGAGCGCCTGGTGCAAGCAGAGCCCGGCCTCAAGCACCGCATCAGCGCCCTGCGCAGGCGCGTGCTGTTTCATGCCCTGGAAGAGGTCGGCTACAGCGAACAGCACGCACAGGCGCTGGCCAACGAAGGCTTCGAAGTGTTCCTGCATGCCCGCCACCAGGTGGAGATCTTCCCAGAGGTGCAGCC  >  NC_002947/5964909‑5965200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.