New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1425 =	49 (0.930)	3 (0.060)	3/232	NT	6.0%	coding (396/792 nt)	parA	chromosome partition protein
	?	NC_002947	1453 =	48 (0.970)					coding (368/792 nt)	parA	chromosome partition protein

CGGGCGGCGATACGCTTGATGTTATCCACAAGGTCGCTGAGACCTTCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCGGTCAGG‑TCACGGTTGGCCGGCAGCAACTGGAAGCCTCCGTGCTCGGAGTAGTG  >  NC_002947/1309‑1598                                                                                                                                                   |                                                                                                                                                   cGGGCGGCGATACGCTTGATGTTATCCACAAGGTCGCTGAGACCTTCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATg                                                                                                                                               >  1:756118/1‑150 (MQ=255)    gcggcgATACGCTTGATGTTATCCACAAGGTCGCTGAGACCTTCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAg                                                                                                                                            <  1:450440/150‑1 (MQ=255)         gATACGCTTGATGTTATCCACAAGGTCGCTGAGACCTTCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTa                                                                                                                                       >  1:251250/1‑150 (MQ=255)           tACGCTTGATGTTATCCACAAGGTCGCTGAGACCTTCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGt                                                                                                                                     >  2:1243257/1‑150 (MQ=255)           caaccgtgacctgaccgccgctgaggtggtgctgctggaaatgcaggtcaaggaaagccgtctgcgcaacgccctggcgcctattcgcgataactacgactacatcctcatcgacagcgacggcgggcagtcgatgAGGATGTAGTCGTa                                                                                                                                       <  2:278726‑M2/14‑1 (MQ=255)              gCTTGATGTTATCCACAAGGTCGCTGAGACCTTCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTAt                                                                                                                                  >  2:477124/1‑150 (MQ=255)                     ctgaccgccgctgaggtggtgctgctggaaatgcaggtcaaggaaagccgtctgcgcaacgccctggcgcctattcgcgataactacgactacatcctcatcgacagcgacggcgggcagtcgatgAGGATGTAGTCGTAGTTATCGCGa                                                                                                                             >  2:1070508‑M2/127‑150 (MQ=255)                         tCCACAAGGTCGCTGAGACCTTCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACAAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑TCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGgc                                                                                                                       <  2:444253/150‑1 (MQ=255)                             cgctgaggtggtgctgctggaaatgcaggtcaaggaaagccgtctgcgcaacgccctggcgcctattcgcgataactacgactacatcctcatcgacagcgacggcgggcagtcgatgAGGATGTAGTCGTAGTTATCGCGAATAGgcgc                                                                                                                     <  1:1070508‑M2/32‑1 (MQ=255)                             caAGGTCGCTGAGACCTTCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCa                                                                                                                   >  2:224536/1‑150 (MQ=255)                                      tGAGACCTTCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATc                                                                                                                                 >  1:1317948/1‑127 (MQ=255)                                      tGAGACCTTCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATc                                                                                                                                 <  2:1317948/127‑1 (MQ=255)                                           ccTTCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGa                                                                                                     <  2:756118/150‑1 (MQ=255)                                            cTTCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAgg                                                                                                                                                  <  2:673077/104‑1 (MQ=255)                                            cTTCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCAACGACAGCGACGGCG‑G‑GCAGTCGATGAgg                                                                                                                                                  >  1:673077/1‑104 (MQ=255)                                             ttCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGtt                                                                                                                                    >  1:1082072/1‑117 (MQ=255)                                             ttCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGtt                                                                                                                                    <  2:1082072/117‑1 (MQ=255)                                                    gCGGAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTcc                                                                                            <  1:133645/150‑1 (MQ=255)                                                           aCTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCt                                                                                     <  1:224536/150‑1 (MQ=255)                                                             tCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATcg                                                                                                                                <  1:1308790/105‑1 (MQ=255)                                                             tCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATcg                                                                                                                                >  2:1308790/1‑105 (MQ=255)                                                             tCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGc                                                                                   >  1:1004760/1‑150 (MQ=255)                                                               acacTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCAt                                                                                 >  2:934869/1‑150 (MQ=255)                                                               acacTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCAt                                                                                 >  2:509939/1‑150 (MQ=255)                                                                cacTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCAtt                                                                                <  1:1035150/150‑1 (MQ=255)                                                                       tGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATGGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGGATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCGTTTCcagga                                                                         >  2:228945/1‑148 (MQ=255)                                                                         gggATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCagcagc                                                                       <  2:502247/150‑1 (MQ=255)                                                                           gATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGcac                                                                     <  1:934869/150‑1 (MQ=255)                                                                             tAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGcacca                                                                   >  1:483000/1‑150 (MQ=255)                                                                                tCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCt                                                                >  1:186336/1‑150 (MQ=255)                                                                                     gcgcctattcgcgataactacgactacatcctCATCGACTGCC‑CGCCG‑TCGCTGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAgcg                                                           <  1:1070508‑M1/118‑1 (MQ=255)                                                                                     ccATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAgcg                                                           <  2:251250/150‑1 (MQ=255)                                                                                      cATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTcc                                                                             <  1:696988/131‑1 (MQ=255)                                                                                      cATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTcc                                                                             >  2:696988/1‑131 (MQ=255)                                                                                      cATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAgcgg                                                          >  1:941440/1‑150 (MQ=255)                                                                                      cATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAgcgg                                                          <  2:1004760/150‑1 (MQ=255)                                                                                       aTCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGcac                                                                     <  1:1010055/138‑1 (MQ=255)                                                                                       aTCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGcac                                                                     >  2:1010055/1‑138 (MQ=255)                                                                                       aTCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAgcggc                                                         >  2:331525/1‑150 (MQ=255)                                                                                           gAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCggtc                                                     >  1:454146/1‑150 (MQ=255)                                                                                             tcgcgataactacgactacatcctCATCGACTGCC‑CGCCGTC‑GCTGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCggtcag                                                   >  2:1070508‑M1/25‑150 (MQ=255)                                                                                                 aCCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCggtcagg‑tca                                              >  1:176220/1‑150 (MQ=255)                                                                                                   cAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGGCGTACAGCCATTACCTGCATTTCCAGCAGCACCACCTCAGCGGCGGTCAGG‑TCACg                                            >  2:749363/1‑150 (MQ=255)                                                                                                       tacgactacatcctCATCGACTGCC‑CGCCG‑TCGCTGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCGGTCAGG‑TCACGGTTg                                        <  2:278726‑M1/136‑1 (MQ=255)                                                                                                       gCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCGGTCAGG‑TCACGGTTg                                        <  1:477124/150‑1 (MQ=255)                                                                                                         aTTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCa                                                                                  >  2:398732/1‑107 (MQ=255)                                                                                                         aTTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCa                                                                                  <  1:398732/107‑1 (MQ=255)                                                                                                           tCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCGGTCAGG‑TCACGGtt                                         <  1:55448/145‑1 (MQ=255)                                                                                                           tCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCGGTCAGG‑TCACGGtt                                         >  2:55448/1‑145 (MQ=255)                                                                                                           tCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGAGGCGGTATGG‑TCGAGGTTGGcca                                    >  2:1371316/1‑149 (MQ=255)                                                                                                              gCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGAGTTGCGCAGACGGCTTTCCGTGACCGCCATTTCCAGCAGCACCACCTCAGCGGCGGTCAGG‑TCACGGTTGGCCGgca                                 <  1:1243257/150‑1 (MQ=255)                                                                                                                gTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCggtcag                                                   >  2:935418/1‑131 (MQ=255)                                                                                                                gTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCggtcag                                                   <  1:935418/131‑1 (MQ=255)                                                                                                                      atggACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCa                                                              <  1:1143090/111‑1 (MQ=255)                                                                                                                      ATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCa                                                              <  2:1143090‑M1/114‑1 (MQ=255)                                                                                                                       TCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTa                                                                                                                                       <  2:744775‑M1/40‑1 (MQ=255)                                                                                                                       TCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTa                                                                                                                                       >  1:744775‑M1/1‑40 (MQ=255)                                                                                                                            aGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCGGTCCGGATCCCCG‑TGGCCGGCAGCAACTGGAAGCCt                   <  1:749363/150‑1 (MQ=255)                                                                                                                                  ggcg‑g‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCGGTCAGG‑TCACGGTTGGCCGGCAGCAACTGGAAGCCTCCGTGc             >  2:1080558/1‑150 (MQ=255)                                                                                                                                     g‑g‑gCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGAc                                                                                                    >  2:1008523/1‑61 (MQ=255)                                                                                                                                     g‑g‑gCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGAc                                                                                                    <  1:1008523/61‑1 (MQ=255)                                                                                                                                          cAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCGGTCAGG‑TCACGGtt                                         <  2:500968/116‑1 (MQ=255)                                                                                                                                          cAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCGGTCAGG‑TCACGGtt                                         >  1:500968/1‑116 (MQ=255)                                                                                                                                            gtcgatgAGGATGTAGTAGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCGGTCAGG‑TCACGGTTGGCCGGCAGCAACTGGAAGCCTCCGTGCTCGGagta     <  2:176220‑M2/143‑1 (MQ=255)                                                                                                                                              cgatgAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCGGCCAGG‑TCACGGTTGGCCGGCAGCAACTGGAAGCCTCCGTGCTCGGagtagt   <  1:509939‑M2/145‑1 (MQ=255)                                                                                                                                               gatgAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCAt                                                                                 <  2:108615‑M2/68‑1 (MQ=255)                                                                                                                                               gatgAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCAt                                                                                 >  1:108615‑M2/5‑72 (MQ=255)                                                                                                                                               gatgAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCGGTCAGG‑TCACGGTTGGCCGGCAGCAACTGGAAGCCTCCGTGCTCGGAGTAGTg  >  2:1111331‑M2/5‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                   CGGGCGGCGATACGCTTGATGTTATCCACAAGGTCGCTGAGACCTTCCAGTGCGTAGTACTCACACTGCATGGGGATAATCACGCCATCGGAAGCGACCAGAGCATTCAGCGTGAGCATCGACAGCGACGGCG‑G‑GCAGTCGATGAGGATGTAGTCGTAGTTATCGCGAATAGGCGCCAGGGCGTTGCGCAGACGGCTTTCCTTGACCTGCATTTCCAGCAGCACCACCTCAGCGGCGGTCAGG‑TCACGGTTGGCCGGCAGCAACTGGAAGCCTCCGTGCTCGGAGTAGTG  >  NC_002947/1309‑1598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.