New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	447140 =	53 (1.010)	6 (0.150) +TTACGTCTTCAGGTTCAGCGTGGTCCCT	4/190	NT	11.7%	intergenic (+17/‑285)	PP_0368/PP_0369	acyl‑CoA dehydrogenase/diguanylate cyclase
	?	NC_002947	= 3252686	64 (1.220)					intergenic (+173/+70)	ureG/PP_2851	urease accessory protein/hypothetical protein

GTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGCAGTGAGGCTTGTCCGGTTGCCCTTCATAGCGGTCATGGTGCCGCACCCAGTCCATGGTCCCA  >  NC_002947/3252539‑3252831                                                                                                                                                    |                                                                                                                                                  gTCCGCAGAGAGGGGAACGCGTGGGCTGGCACCGGCTCTGCCGGTGTTTGCGGGTGTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACggg                                                                                                                                                 <  2:890568/150‑1 (MQ=25) gTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACggg                                                                                                                                                 <  1:818448/150‑1 (MQ=255)         agagACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACcgc                                                                                                                                         >  1:421594/1‑150 (MQ=255)            gaCCAACGCGGTGGCTGCTGCCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCa                                                                                                                                      <  1:434395/150‑1 (MQ=255)             aCCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAg                                                                                                                                     <  2:873551/150‑1 (MQ=255)             aCCAACGCGGTGGCTGGCACCGGCTCTGCCGGGGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAAAAATGCACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCCTCCCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAg                                                                                                                                     >  2:63129/1‑150 (MQ=25)              ccAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAgg                                                                                                                                    <  2:421594/150‑1 (MQ=255)               cAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGCGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCACGc                                                                                                                                   >  1:437841/1‑150 (MQ=255)                aaCGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGcc                                                                                                                                  >  2:280922/1‑150 (MQ=255)                aaCGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGAAGGTTAGAATGAAGCCGGGAGGGCCGTCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGcc                                                                                                                                  >  1:1095887/1‑150 (MQ=25)                aaCGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAAAGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGGAAACCCGCTCCCACGGGGCGACCGCGCAGGcc                                                                                                                                  >  2:128649/1‑150 (MQ=255)                  cgcgGTGGCTGGCACCGGCTCTGGCGGTGTTCGCGGGCTCACCCGTGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGt                                                                                                                                <  2:187308/150‑1 (MQ=255)                  cgcgGTGGCTGGCACCGGCTCTGCCGGTGTTCGGGGGTTTACCCGCGAATACGGTAGCGGACGCAGCCAGTAATTTCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGt                                                                                                                                <  1:602570/150‑1 (MQ=25)                           gaacACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACggg                                                                                                                                                 <  2:620876/121‑1 (MQ=255)                           gaacACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACggg                                                                                                                                                 >  1:620876/4‑124 (MQ=255)                               aCCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCa                                                                                                                   >  2:1232342/1‑150 (MQ=255)                                     tctGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAg                                                                                                             >  2:637662/1‑150 (MQ=255)                                          cGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGcc                                                                                                        >  1:923944/1‑150 (MQ=255)                                          cGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGcc                                                                                                        >  1:226710/1‑150 (MQ=255)                                          cGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGcc                                                                                                        >  2:957268/1‑150 (MQ=255)                                           ggTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGAAGGCCGTCGAATGTTg                                                                                                                       <  2:79305/134‑1 (MQ=255)                                           ggTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGAAGGCCGTCGAATGTTg                                                                                                                       >  1:79305/1‑134 (MQ=255)                                           cgtattCGCGGGTAAACCCGCGAACACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGccc                                                                                                       >  1:712353/5‑150 (MQ=25)                                            gtgtTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGcccc                                                                                                      >  1:1228784/1‑150 (MQ=255)                                               ttCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCca                                                                                                   <  1:846163/150‑1 (MQ=255)                                                  tcgtgTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAg                                                                                                <  2:1295815/146‑1 (MQ=255)                                                      gTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTACTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGgtgt                                                                                            <  2:480147/150‑1 (MQ=255)                                                       tttACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGtgtg                                                                                           >  2:810817/1‑150 (MQ=255)                                                        ttACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAgg                                                                                                                                    >  1:864993/1‑108 (MQ=255)                                                        ttACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAgg                                                                                                                                    <  2:864993/108‑1 (MQ=255)                                                        ttACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGCGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGc                                                                                          <  2:923944/150‑1 (MQ=255)                                                          ccccGCAGATACGGTAGCGGCCGCAACAATGACCGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGTGCGACCGCGCAGCCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGAgt                                                                                        <  1:1422484/149‑1 (MQ=25)                                                          aCCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCgt                                                                                        <  1:807095/150‑1 (MQ=255)                                                           cccGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCgtg                                                                                       <  1:810817/150‑1 (MQ=255)                                                            ccGCGAATACGGTAGCGGCCGCAACAATGAATGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAg                                                                                                                                     <  2:1265066/103‑1 (MQ=255)                                                            ccGCGAATACGGTAGCGGCCGCAACAATGAATGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAg                                                                                                                                     >  1:1265066/1‑103 (MQ=255)                                                             cgcgAACACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGtt                                                                                     <  2:712353/150‑1 (MQ=255)                                                              gcgAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCAGGCATCTTCGCGGGTAAATCCGCACCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTg                                                                                    >  1:883677/1‑150 (MQ=255)                                                               ggAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGc                                                                                   <  1:1232342/149‑1 (MQ=255)                                                                 aaTACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCa                                                                                 <  2:1228784/150‑1 (MQ=255)                                                                    aCGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGca                                                                              >  2:99131/1‑150 (MQ=255)                                                                      ggTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGcatc                                                                            >  1:892710/1‑150 (MQ=255)                                                                        tAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTGCGTGTGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGcatcat                                                                          <  2:549450/150‑1 (MQ=255)                                                                              ccGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGa                                                                    <  2:1339235/150‑1 (MQ=255)                                                                                 caacaaTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAgg                                                                                                                                    >  1:1362549/1‑83 (MQ=255)                                                                                 caacaaTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAgg                                                                                                                                    <  2:1362549/83‑1 (MQ=255)                                                                                  aacaaTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGAcagc                                                                >  2:884872/1‑150 (MQ=255)                                                                                       tGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAACCCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCGCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGCAGTGa                                                           <  1:63129/150‑1 (MQ=255)                                                                                        gAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGCAGTGAg                                                          <  2:892710/150‑1 (MQ=255)                                                                                                 gTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCgtg                                                                                       <  1:62928/112‑1 (MQ=255)                                                                                                 gTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCgtg                                                                                       >  2:62928/1‑112 (MQ=255)                                                                                                    gAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGCAGTGAGGCTTGTCCGGtt                                              <  1:637662/150‑1 (MQ=255)                                                                                                      aaTTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGAc                                                                   >  1:1053712/1‑127 (MQ=255)                                                                                                      aaTTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGAc                                                                   <  2:1053712/127‑1 (MQ=255)                                                                                                       aTTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGTAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGCAGTGAGGCTTGTCCGGTTGcc                                           <  2:1376664/150‑1 (MQ=255)                                                                                                            ctagcagcGCCGGCCTCTTCGCGGGTAAACGCGCTCCTACGGGGCCACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCCTCATCTGTGACAGCAGTGAGGCTTGTCCGGTTGCCCTTCa                                      <  2:191591/148‑1 (MQ=255)                                                                                                            ccAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGCAGTGAGGCTTGTCCGGTTGCCCTTCa                                      <  2:1033569/150‑1 (MQ=255)                                                                                                             cagcagGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGagggaccacgctgaacctgaagacgtaaaaaacccgcctgccctgaccgggaggcgggt                                                                                        <  1:1303872‑M2/99‑60 (MQ=255)                                                                                                             cagcagGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGagggaccacgctgaacctgaagacgtaaaaaacccgcctgccctgaccgggaggcgggt                                                                                        >  2:1303872‑M2/1‑40 (MQ=255)                                                                                                              agcagGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGAGATGTGGGTGGTCCGGTTGCCCTTCATa                                    >  2:685000/1‑150 (MQ=38)                                                                                                                      cggccTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGCAGTGAGGCTTGTCCGGTTGCCCTTCATAGCGGTCAt                            <  1:372372/150‑1 (MQ=255)                                                                                                                         ccTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGCAGTGAGGCTTGTCCGGTTGCCCTTCATAGCGGTCATGGt                         <  1:312340/150‑1 (MQ=255)                                                                                                                          ctctTCGCGGGTAAACCCGCTCCTACGagggaccacgctgaacctgaagacgtaaaaaacccgcctgccctgaccggga                                                                                               >  1:389593‑M2/1‑27 (MQ=255)                                                                                                                          ctctTCGCGGGTAAACCCGCTCCTACGagggaccacgctgaacctgaagacgtaaaaaacccgcctgccctgaccggga                                                                                               <  2:389593‑M2/79‑53 (MQ=255)                                                                                                                          ctctTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGa                                                                                                                <  2:1348084/62‑1 (MQ=255)                                                                                                                          ctctTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGa                                                                                                                >  1:1348084/1‑62 (MQ=255)                                                                                                                          ctctTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGCAGTGAGGCTTGTCCGGTTGCCCTTCATAGCGGTCATGGTg                        <  1:99131/150‑1 (MQ=255)                                                                                                                           tctTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGCAGTGAGGCTTGTCCGGTTGCCCTTCATAGCGGTCATGGTGc                       <  2:1095887/150‑1 (MQ=255)                                                                                                                                  gggTAAACCCGCTCCTACGagggaccacgctgaacctgaagacgtaaaaaaccc                                                                                                                <  2:899730‑M2/54‑36 (MQ=255)                                                                                                                                  gggTAAACCCGCTCCTACGagggaccacgctgaacctgaagacgtaaaaaaccc                                                                                                                >  1:899730‑M2/1‑19 (MQ=255)                                                                                                                                    gTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGCAGTGAGGCTTGCCCGGTTGCCCTTCATAGCGGTCATGGTGCCGCACCCAg              >  1:785456/1‑150 (MQ=255)                                                                                                                                          ccGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGgt                                                                                              >  1:507211/1‑64 (MQ=255)                                                                                                                                          ccGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGgt                                                                                              <  2:507211/64‑1 (MQ=255)                                                                                                                                             cTCCTACGGGGCGCCCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGCAGTGAGGCTTGTCCGGTTGCCCTTCATAGCGGTCATGGTGCCGCACCCAGTCCATGGTc     <  1:128649/150‑1 (MQ=255)                                                                                                                                                cTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGCAGTGAGGCTTGTCCGGTTGCCCTTCATAGCGGTCATGGTGCCGCACCCAGTCCATGGTCCCa  >  2:796120/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGCGACCGCGCAGGCCGTCGAATGTTGAGCAGGACAGTTGCCCCCCACAGGTGTGCGTGTTGCCAGCATCATCTGTGACAGCAGTGAGGCTTGTCCGGTTGCCCTTCATAGCGGTCATGGTGCCGCACCCAGTCCATGGTCCCA  >  NC_002947/3252539‑3252831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.