New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1862545 | 53 (1.010) | 5 (0.100) | 4/238 | NT | 9.0% | coding (189/1068 nt) | PP_1666 | hypothetical protein |
? | NC_002947 | = 1862562 | 50 (0.980) | coding (206/1068 nt) | PP_1666 | hypothetical protein |
GGCTGAAAATGTCTCCGGCCTTTATCAGGTGCGCGAGCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTTCGACCCAGGTAGCACCGAGCGGGCCTTGCGCAAGGCTGGCCTGGCACTGTGGGGCAGTAA > NC_002947/1862416‑1862706 | ggCTGAAAATGTCTCCGGCCTTTATCAGGTGCGCGAGCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTggc > 2:1151876‑M2/1‑147 (MQ=255) cTGAAAATGTCTCCGGCCTTTATCAGGTGCGCGAGCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCg > 1:1405194/1‑150 (MQ=255) aaaTGTCTCCGGCCTTTATCAGGTGCGCGAGCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCt < 2:1421605/150‑1 (MQ=255) aaTGTCTCCGGCCTTTATCAGGTGCGCGAGCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGCCTGACCGGTGCCCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTg < 1:1150713/150‑1 (MQ=255) tGTCTCCGGCCTTTATCAGGTGCGCGAGCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTgcg > 2:1035011/1‑150 (MQ=255) ctcCGGCCTTTATCAGGTGCGCGAGCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCaa < 1:331567/150‑1 (MQ=255) tcCGGCCTTTATCAGGTGCGCGAGCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAg > 2:911952/1‑150 (MQ=255) tcCGGCCTTTATCAGGTGCGCGAGCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAg < 1:911952/150‑1 (MQ=255) tcCGGCCTTTATCAGGTGCGCGAGCCGGCCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACACTAAGGCCGTGCAGAGCCCTGCATTGGCGGGGCCGCGCAAg > 2:111459/1‑150 (MQ=255) cGGCCTTTATCAGGTGCGCGAGCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGa > 2:57251/1‑150 (MQ=255) cGGCCTTTATCAGGTGCGCGAGCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGa < 1:1418044/150‑1 (MQ=255) ggCCTTTAGCAGGTGCGCGAGCCGGTCACCGGGCCGGGCGCCGGAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGAGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGAc < 2:525903/150‑1 (MQ=255) gCCTTTATCAGGTGCGCGAGCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGAcc < 1:1402369/150‑1 (MQ=255) tCAGGTGCGCGAGCCGGTGACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCa < 2:153070/150‑1 (MQ=255) gcgAGCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAAtcatca < 2:370478/150‑1 (MQ=255) gCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTg < 1:519270‑M2/112‑2 (MQ=255) gCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTg > 2:519270‑M2/1‑111 (MQ=255) gCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCa > 1:17693/1‑150 (MQ=255) cGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTggc < 2:470690‑M2/112‑4 (MQ=255) cGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTggc > 1:470690‑M2/1‑109 (MQ=255) ggTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGt < 1:1035011/150‑1 (MQ=255) ggTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGt < 1:57251/150‑1 (MQ=255) gTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTg < 2:1308697/150‑1 (MQ=255) gTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTg > 2:269851/1‑150 (MQ=255) ccgggcGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTTACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGaa < 1:1282680/150‑1 (MQ=255) ggcGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGaa > 1:636175/1‑147 (MQ=255) ggcGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGaa < 2:636175/147‑1 (MQ=255) ggcGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGcc > 1:633495/1‑150 (MQ=255) gCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGc > 1:1136909/1‑94 (MQ=255) gCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGc < 2:1136909/94‑1 (MQ=255) tACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTc < 1:1426290/150‑1 (MQ=255) cAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGtt < 2:77231/150‑1 (MQ=255) aaaGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGaa < 1:346263/117‑1 (MQ=255) aaaGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGaa > 2:346263/1‑117 (MQ=255) cccTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTTCGAcc < 2:17693/150‑1 (MQ=255) ccTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAatcatc < 2:334573/94‑1 (MQ=255) ccTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAatcatc > 1:334573/1‑94 (MQ=255) cTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGGGCCCTGCATTGGCCGAGCTGCGCAAGGACCCCCAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGCGTTCGACCCa > 2:367878/1‑150 (MQ=255) gTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCg < 1:809856/56‑1 (MQ=255) gTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCg > 2:809856/1‑56 (MQ=255) gTGCAGCGTCTGACCGGTGACACTAATGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTTCGACCCAGGTAGCACCGAg > 1:1261208/1‑150 (MQ=255) cAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTTCGACCCAGGTAGCACCGAGCgg < 1:584546/150‑1 (MQ=255) cAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTTCGACCCAGGTAGCACCGAGCgg > 1:1335052/1‑150 (MQ=255) gCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTTCGACCCAGGTAGCACCGAGCGGGc > 1:1116889/1‑150 (MQ=255) ttaCCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTTCGACCCAGGTAGCACCGAGCGGGCCTTgc < 1:111459/148‑1 (MQ=255) aCCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTTCGACCCAGGTAGAACCGAGCGGGCCTTgcgc > 1:541625/1‑150 (MQ=255) cGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTTCGACCCAGGTAGCACCGAGCGGGCCTTGCGCaa > 2:560506/1‑150 (MQ=255) gACCCTAAGGACGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGACGCCGGCCCAACCAAGTCGCCAATGGGTGAGGTTGACCCATGTCGCACCCAGCGGGCCGTTCGTAAGGct > 2:87685/1‑150 (MQ=255) cccTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGa < 2:1145127/93‑1 (MQ=255) cccTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGa > 1:1145127/1‑93 (MQ=255) ccTAAGGCCGTGCAGAGCCCTGCATTggccttagggtcaccggtcagacgctgcaccaacgtatccagggctttgactgtggccgcggtacgggcttcggcgcccggcccggtgaccggctcgcgcacctgataaaggccggagacattt < 1:212724‑M2/150‑125 (MQ=255) ccTAAGGCCGTGCAGAGCCCTGCATTggccttagggtcaccggtcagacgctgcaccaacgtatccagggctttgactgtggccgcggtacgggcttcggcgcccggcccggtgac < 2:1283530‑M2/116‑91 (MQ=255) ccTAAGGCCGTGCAGAGCCCTGCATTggccttagggtcaccggtcagacgctgcaccaacgtatccagggctttgactgtggccgcggtacgggcttcggcgcccggcccggtgac > 1:1283530‑M2/1‑26 (MQ=255) ccTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCg > 2:523044/1‑96 (MQ=255) ccTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCg < 1:523044/96‑1 (MQ=255) ccTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTTCGACCCAg > 1:55417/1‑118 (MQ=255) ccTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTTCGACCCAGGTAGCACCGAGCGGGCCTTGCGCAAGGctggc > 1:1171028/1‑150 (MQ=255) ccTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTACGACCCAg < 2:55417/118‑1 (MQ=255) tAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAg > 2:1141654/1‑64 (MQ=255) tAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAg < 1:1141654/64‑1 (MQ=255) gCCGTGCAGAGCCCTGCATTggccttagggtcaccggtcatacgctgcaccaac > 1:49277‑M2/1‑20 (MQ=255) gCCGTGCAGAGCCCTGCATTggccttagggtcaccggtcagacgctgcaccaac < 2:49277‑M2/54‑35 (MQ=255) cccTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTTCGACCCAGGTAGCACCGAGCGGGCCTTGCGCAAGGCTGGCCTGGCACTGTGGGGCAg > 1:1191895/1‑150 (MQ=255) cTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAatc > 1:964573/1‑38 (MQ=255) cTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAatc < 2:964573/38‑1 (MQ=255) tGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTTCGACCCAGGTAGCACCGAGCGGGCCTTGCGCAAGGCTGGCCTGGCACTGTGGGGCAGTaa > 2:1305601/1‑150 (MQ=255) | GGCTGAAAATGTCTCCGGCCTTTATCAGGTGCGCGAGCCGGTCACCGGGCCGGGCGCCGAAGCCCGTACCGCGGCCACAGTCAAAGCCCTGGATACGTTGGTGCAGCGTCTGACCGGTGACCCTAAGGCCGTGCAGAGCCCTGCATTGGCCGAGCTGCGCAAGGACCCACAGCAAATCATCAACCAGGTGGGCAGCGAAGCCGGCCCGCCCGAGTCGGTAGTGGTCGAGTTCGACCCAGGTAGCACCGAGCGGGCCTTGCGCAAGGCTGGCCTGGCACTGTGGGGCAGTAA > NC_002947/1862416‑1862706 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |