New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2808398 =	51 (0.970)	4 (0.080)	4/232	NT	8.2%	coding (356/375 nt)	PP_2462	hypothetical protein
	?	NC_002947	2808428 =	41 (0.830)					intergenic (+11/+141)	PP_2462/PP_mr35	hypothetical protein/cspA regulatory region

AGGCACGCAAGGCCAGCGGCTCGCAGATGGCGCGCATTCTCAAGCCGCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAA  >  NC_002947/2808281‑2808577                                                                                                                                                    |                                                                                                                                                      aGGCACGCAAGGCCAGCGGCTCGCAGATGGCGCGCATTCTCAAGCCGCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGc                                                                                                                                                     >  2:838638/1‑150 (MQ=255)    cACGCAAGGCCAGCGGCTCGCAGATGGCGCGCATTCTCAAGCCGCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAAc                                                                                                                                                  <  1:482295/150‑1 (MQ=255)     aCGCAAGGCCAGCGGCTCGCAGATGGCGCGCATTCTCAAACCGCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGTACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGAAACt                                                                                                                                                 >  1:193266/1‑150 (MQ=255)      ctgcgaaaccgactgtagggtgaatggcacgggctttgcccgtgttcgcgggtgaacccgctcctacaaggcgaccgcgcaggcttttcacattttgcgcaaggcagttgcccccgcgtgcatgaaacgctgatgacgcgggggaccctg                                                                                                                                                >  2:661811‑M2/143‑144 (MQ=255)       tgcgaaaccgactgtagggtgaatggcacgggctttgcccgtgttcgcgggtgaacccgctcctacaaggcgaccgcgcaggcttttcacattttgcgcaaggcagttgccCCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGc                                                                                                                                               <  2:984166‑M1/39‑1 (MQ=255)       tgcgaaaccgactgtagggtgaatggcacgggctttgcccgtgttcgcgggtgaacccgctcctacaaggcgaccgcgcaggcttttcacattttgcgcaaggcagttgccCCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGc                                                                                                                                               >  1:984166‑M1/112‑150 (MQ=255)         aaGGCCAGCGGCTCGCAGATGGCGCGCATTCTCAAGCCGCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCt                                                                                                                                             >  2:710472/1‑150 (MQ=255)                tcGGCTCGCACATGGCCCGCATTCTCAAGCCGCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCaa                                                                                                                                      <  2:75177/149‑1 (MQ=255)                   gCTCGCAGATGGCGCGCATTCTCAAGCCGCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAAt                                                                                                                                   <  1:814498/150‑1 (MQ=255)                                gcgcATTCTCAAGCCGCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTgc                                                                                                                      <  2:605369/150‑1 (MQ=255)                                gcgcATTCTCAAGCCGCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTgc                                                                                                                      >  2:787721/1‑150 (MQ=255)                                gcgcATTCTCAAGCCGCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGACCAGGGTAGGGTAACCCGCGTCAACTGCGGTTGGTACGCGCGGGGCCAACTGCCTTGCGCAAAATGTGAAAAGCCTgc                                                                                                                      >  1:455504/1‑150 (MQ=255)                                      tctcAAGCCGCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTc                                                                                                                <  2:138182/150‑1 (MQ=255)                                              cGCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTa                                                                                                        <  1:15828/150‑1 (MQ=255)                                               gCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCt                                                                                                                        <  1:1267226/133‑1 (MQ=255)                                               gCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCt                                                                                                                        >  2:1267226/1‑133 (MQ=255)                                                   gacgTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGc                                                                                                   >  2:462896/1‑150 (MQ=255)                                                    acgTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCg                                                                                                  <  2:143621/150‑1 (MQ=255)                                                        ggTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGtt                                                                                              <  2:512416/150‑1 (MQ=255)                                                          tCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTa                                                                                                        >  2:362014/1‑138 (MQ=255)                                                          tCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTa                                                                                                        <  1:362014/138‑1 (MQ=255)                                                          tCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCa                                                                                            <  2:645561/150‑1 (MQ=255)                                                            aCCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCAcc                                                                                          >  1:625801/1‑150 (MQ=255)                                                             cccTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCAccc                                                                                         >  1:146273/1‑150 (MQ=255)                                                              ccTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCcg                                                                                        >  2:1285591/1‑150 (MQ=255)                                                                tGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCcgcg                                                                                      >  1:42363/1‑150 (MQ=255)                                                                    gTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAaca                                                                                  <  2:42363/150‑1 (MQ=255)                                                                       ccGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACgg                                                                               <  2:625801/150‑1 (MQ=255)                                                                        cGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACggg                                                                              <  1:782425/150‑1 (MQ=255)                                                                              gAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGc                                                                        <  2:51024/150‑1 (MQ=255)                                                                                  gcCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGt                                                                    <  1:874900/150‑1 (MQ=255)                                                                                  gcCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGt                                                                    <  2:146273/150‑1 (MQ=255)                                                                                    ctgaacctgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCTTTGCCCGTgt                                                                  <  1:1285591/150‑2 (MQ=255)                                                                                      gaacctgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGC‑GGTCCACCAGCGAACACGGGCAAAGCCCGTGCCAt                                                               <  2:743482/150‑1 (MQ=255)                                                                                                  ggACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAg                                                    >  1:661811/1‑150 (MQ=255)                                                                                                    aCGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTc                                                  >  1:1219311/1‑150 (MQ=255)                                                                                                        gcagggcaggGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCgg                                                                                                 >  1:1313174/1‑99 (MQ=255)                                                                                                        gcagggcaggGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCgg                                                                                                 <  2:1313174/99‑1 (MQ=255)                                                                                                          agggcagggTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCTCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTc                                            <  2:739732/150‑1 (MQ=255)                                                                                                             gcagttgcccccgcgtgcatcaaccgcagttgacgcgggGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCa                                         <  2:984166‑M2/111‑1 (MQ=255)                                                                                                             gcagttgcccccgcgtgcatcaaccgcagttgacgcgggGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCa                                         >  1:984166‑M2/40‑150 (MQ=255)                                                                                                             gcagggTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCa                                         >  1:363044/1‑150 (MQ=255)                                                                                                              cagggtccCCCGCGTCATCAGCGTTTCATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAg                                        >  2:661811‑M1/9‑150 (MQ=255)                                                                                                              cagggTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAg                                        <  2:363044/150‑1 (MQ=255)                                                                                                                 ggTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGc                                                                        <  2:334393/115‑1 (MQ=255)                                                                                                                 ggTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGc                                                                        >  1:334393/1‑115 (MQ=255)                                                                                                                    aaCCCGCGTCCACTGCGGTTGATGCAAGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGCGCCATTCACCCTACAGTCGGTTTCGCAGGCAATc                                  <  2:455504/150‑1 (MQ=255)                                                                                                                      cccgcgtgcatcaaccgcagttgacgcgggGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCggg                                                                                                >  2:1425640‑M2/31‑86 (MQ=255)                                                                                                                      cccgcgtgcatcaaccgcagttgacgcgggGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCggg                                                                                                <  1:1425640‑M2/56‑1 (MQ=255)                                                                                                                      CCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCCTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATccc                                >  1:1153773‑M1/1‑150 (MQ=255)                                                                                                                       CCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCt                                                                                                            <  1:1152153‑M1/73‑1 (MQ=255)                                                                                                                       CCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCt                                                                                                            >  2:1152153‑M1/1‑73 (MQ=255)                                                                                                                       CCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGc                                                                                                   <  1:73831‑M1/82‑1 (MQ=255)                                                                                                                       CCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGc                                                                                                   >  2:73831‑M1/1‑82 (MQ=255)                                                                                                                       CCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCgg                                                                                                 <  1:729290‑M1/84‑1 (MQ=255)                                                                                                                       CCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCAccc                                                         >  1:39402‑M1/1‑124 (MQ=255)                                                                                                                       CCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCAccc                                                         <  2:39402‑M1/124‑1 (MQ=255)                                                                                                                       CCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCg                               <  1:852738‑M1/150‑1 (MQ=255)                                                                                                                       CCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGCTCGCCTTGTAGGAGCgg                                                                                                 >  2:729290‑M1/1‑84 (MQ=255)                                                                                                                        CGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGc                                                                                                                          <  2:668057‑M1/58‑1 (MQ=255)                                                                                                                        CGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGc                                                                                                                          >  1:668057‑M1/1‑58 (MQ=255)                                                                                                                                     gTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAgatgat                 >  2:1263627/1‑150 (MQ=255)                                                                                                                                             acgcgggGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTAGCAGGCAATCCCGCCCCTTCAGATGATTCATCAcc         >  2:1375188‑M2/8‑150 (MQ=255)                                                                                                                                                    ggCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATaaaa  <  2:1086730/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      AGGCACGCAAGGCCAGCGGCTCGCAGATGGCGCGCATTCTCAAGCCGCACGACGTGGTCACCCTGGAGTACCGCTCCGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAA  >  NC_002947/2808281‑2808577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.