New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3219398	63 (1.200)	5 (0.100)	5/228	NT	7.5%	intergenic (‑98/+80)	nfxB/PP_2821	HTH‑type transcriptional regulator NfxB/hypothetical protein
	?	NC_002947	= 3219419	65 (1.340)					intergenic (‑119/+59)	nfxB/PP_2821	HTH‑type transcriptional regulator NfxB/hypothetical protein

GAGCAGGCGCTCATCGGTAGGGAGGTGCATCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGATATAGCCGATGGCATTGGCCTCGCTGCCCACCTTGGC  >  NC_002947/3219271‑3219567                                                                                                                                                      |                                                                                                                                                     gAGCAGGCGCTCATCGGTAGGGAGGTGCATCATAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGc                                                                                                                                                     >  2:1248586‑M2/1‑149 (MQ=255)    cAGGCGCTCATCGGTAGGGAGGTGCATCAGAAGATTCCACACTGCATATCGTGCGGAGATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGcctg                                                                                                                                                  <  2:1262785‑M2/150‑5 (MQ=255)       gcgcTCATCGGTAGGGAGGTGCATCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGcctgcga                                                                                                                                               <  1:762158‑M2/150‑8 (MQ=255)        cgcTCATCGGTAGGGAGGTGCATCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGcctgcgag                                                                                                                                              >  2:1273267‑M2/1‑142 (MQ=255)         gcTCATCGGTAGGGAGGTGCATCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGcctgcgagc                                                                                                                                             <  2:725589‑M2/150‑10 (MQ=255)          cTCATCGGTAGGGAGGTGCATCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAgcg                                                                                                                                            <  1:725589/150‑1 (MQ=255)             aTCGGTAGGGAGGTGCATCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCa                                                                                                                                         >  2:719986/1‑150 (MQ=255)              tCGGTAGGGAGGTGCATCAGAAGATTCCACACTACATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAg                                                                                                                                        <  1:90435/150‑1 (MQ=255)                 gTAGGGAGGTGCATCAGAGGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGgcg                                                                                                                                     >  2:950162/1‑150 (MQ=255)                 gTAGGGAGGTGCATCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGcctgc                                                                                                                                                 >  1:598838‑M2/1‑133 (MQ=255)                 gTAGGGAGGTGCATCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGcctgc                                                                                                                                                 <  2:598838‑M2/138‑6 (MQ=255)                              tCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCgg                                                                                                                        <  1:427791/150‑1 (MQ=255)                              tCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCgg                                                                                                                        >  1:309098/1‑150 (MQ=255)                               cAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGt                                                                                                                       <  1:719986/150‑1 (MQ=255)                                      ttCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAg                                                                                                                <  2:62228/150‑1 (MQ=255)                                      ttCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAg                                                                                                                <  2:309098/150‑1 (MQ=255)                                         cacaCTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTc                                                                                                             >  2:1146493/1‑150 (MQ=255)                                         cacaCTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTc                                                                                                             >  1:47690/1‑150 (MQ=255)                                          acacTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGACCAAATAATGGCTCAATCAAGGCTCGCAGGTGGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCa                                                                                                            >  2:103160/1‑150 (MQ=255)                                           cacTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAg                                                                                                           <  1:450441/150‑1 (MQ=255)                                           cacTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAg                                                                                                           >  1:839266/1‑150 (MQ=255)                                           cacTGCATATCGTGCGGGACTTGTAACTAAAAACGTGTCATAGGTCTCCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAg                                                                                                           <  2:13230/150‑1 (MQ=255)                                            acTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAgg                                                                                                          >  2:1340261/1‑150 (MQ=255)                                               gCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGa                                                                                                       <  2:754911/150‑1 (MQ=255)                                                   atCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAggcg                                                                                                   <  2:596942/150‑1 (MQ=255)                                                       tGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGa                                                                                               >  1:892470/1‑150 (MQ=255)                                                         cGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAggg                                                                                                         >  1:242772/1‑138 (MQ=255)                                                         cGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAggg                                                                                                         <  2:242772/138‑1 (MQ=255)                                                             cATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTca                                                                                         <  1:1410466/150‑1 (MQ=255)                                                              aTTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTcag                                                                                        >  1:730968/1‑150 (MQ=255)                                                               ttGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTcagg                                                                                       <  2:45800/150‑1 (MQ=255)                                                                    aatgaaAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGcc                                                                                                                  >  2:1297795/1‑118 (MQ=255)                                                                    aatgaaAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGcc                                                                                                                  <  1:1297795/118‑1 (MQ=255)                                                                     atgaaAACGGCTCATAGGGCACGCATTTGAGCAAATAATGGATCAATCAAGGCTCGCAGGTCGCAG‑CCCTGGAGGGACTTGCGTGCGAGCGCCATGCGCGGCCTCCCCCGGTATGCCAGGTGAGGGGATGCGGCGAAGCTcagggcaggg                                                                                 >  1:754533/1‑150 (MQ=255)                                                                        aaaaCGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGa                                                                              >  1:761874/1‑150 (MQ=255)                                                                          aaCGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAGCCCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGaa                                                                             <  1:1331204/150‑1 (MQ=255)                                                                          aaCGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAag                                                                            <  1:1262785/150‑1 (MQ=255)                                                                            cGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAagag                                                                          <  2:761874/150‑1 (MQ=255)                                                                               cTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAag                                                                            <  2:1313134/145‑1 (MQ=255)                                                                               cTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAag                                                                            >  1:1313134/1‑145 (MQ=255)                                                                                tCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACt                                                                      >  2:1394699/1‑150 (MQ=255)                                                                                  aTAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTcag                                                                                        <  1:707081/130‑1 (MQ=255)                                                                                  aTAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTcag                                                                                        >  2:707081/1‑130 (MQ=255)                                                                                  aTAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACttt                                                                    <  2:309370/150‑1 (MQ=255)                                                                                    aGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGa                                                                  <  1:510222/150‑1 (MQ=255)                                                                                                  aGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACg                                                    >  2:998738/1‑150 (MQ=255)                                                                                                          atGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGCAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGgt                                            <  1:1146493/150‑1 (MQ=255)                                                                                                             gCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTc                                         <  1:998738/150‑1 (MQ=255)                                                                                                             gCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTc                                         <  2:892470/150‑1 (MQ=255)                                                                                                             gCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTc                                         >  1:664108/1‑150 (MQ=255)                                                                                                             gCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTc                                         >  1:664326/1‑150 (MQ=255)                                                                                                              cTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCg                                        >  1:844164/1‑150 (MQ=255)                                                                                                               tcaatcaaGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCt                                                                                                                                   >  2:1035625/1‑58 (MQ=255)                                                                                                               tcaatcaaGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCt                                                                                                                                   <  1:1035625/58‑1 (MQ=255)                                                                                                               tcaatcaaGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGa                                       >  1:916674/1‑150 (MQ=255)                                                                                                               tcaatcaaGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGa                                       <  2:664326/150‑1 (MQ=255)                                                                                                               tcaatcaaGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGa                                       <  2:664108/150‑1 (MQ=255)                                                                                                               tcaatcaaGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGa                                       <  2:47690/150‑1 (MQ=255)                                                                                                                  atcaaGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTcagggcag                                                                                   <  2:627844/103‑1 (MQ=255)                                                                                                                  atcaaGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTcagggcag                                                                                   >  1:627844/1‑103 (MQ=255)                                                                                                                  atcaaGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGatat                                    >  2:477670/1‑150 (MQ=255)                                                                                                                    caaGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGATATAg                                  <  1:943426/150‑1 (MQ=255)                                                                                                                     aaGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGcctacgagccttgattgagccattatttgctcaaatgggtgccccatgagccgttttcattcacaatgcccgcacgataagcagtgtggaatcttctgatgcagctccctaccgatg                                 <  1:708735‑M2/150‑118 (MQ=255)                                                                                                                     aaGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGATATAGc                                 >  2:1157294/1‑150 (MQ=255)                                                                                                                        gCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGATATAGCCGa                              <  1:1340261/150‑1 (MQ=255)                                                                                                                        gCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGATATAGCCGa                              <  1:207216/150‑1 (MQ=255)                                                                                                                            gCAGGTCGCAG‑CCCTGCAGGGGCTTGcctgcgagccttgattgagccattatttgctcaaatgggtgccctat                                                                                                       >  2:1315562‑M2/1‑26 (MQ=255)                                                                                                                            gCAGGTCGCAG‑CCCTGCAGGGGCTTGcctgcgagccttgattgagccattatttgctcaaatgggtgccctat                                                                                                       <  1:1315562‑M2/73‑48 (MQ=255)                                                                                                                              aGGTCGCAG‑CCCTGCAGGGGCTTGcctgcgagccttgattgagccattatttgctcaaatgggtgccctatga                                                                                                     >  1:892161‑M2/1‑24 (MQ=255)                                                                                                                              aGGTCGCAG‑CCCTGCAGGGGCTTGcctgcgagccttgattgagccattatttgctcaaatgggtgccctatga                                                                                                     <  2:892161‑M2/73‑50 (MQ=255)                                                                                                                                gTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGATATAGCCGATGGCATTg                      <  1:950162/150‑1 (MQ=255)                                                                                                                                     aG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGATATAGCCGATGGCAttcacaat                 <  2:730968/150‑7 (MQ=255)                                                                                                                                        cccTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCTGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGatat                                    <  2:390681/129‑1 (MQ=255)                                                                                                                                        cccTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCTGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGatat                                    >  1:390681/1‑129 (MQ=255)                                                                                                                                         ccTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGATATAGCCGATGGCATTGGCCTCGCt              >  1:365956/1‑150 (MQ=255)                                                                                                                                          cTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGATATAGCCGATGGCATTGGCCTCGCTg             >  2:348252/1‑150 (MQ=255)                                                                                                                                             cAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGgtgt                                          <  2:416366/118‑1 (MQ=255)                                                                                                                                             cAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGgtgt                                          >  1:416366/1‑118 (MQ=255)                                                                                                                                                gggCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGgtgt                                          >  1:381430/1‑115 (MQ=255)                                                                                                                                                gggCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGgtgt                                          <  2:381430/115‑1 (MQ=255)                                                                                                                                                   cTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGa                                       >  1:385360/1‑115 (MQ=255)                                                                                                                                                   cTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGa                                       <  2:385360/115‑1 (MQ=255)                                                                                                                                                     tGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGATATAGCCGATGGCATTGGCCTCGCTGCCCACCTTGGc  <  2:844164/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     GAGCAGGCGCTCATCGGTAGGGAGGTGCATCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGTCGCAG‑CCCTGCAGGGGCTTGCCTGCGAGCGCCAGGCGCTGCCTCCCCCGGTATGCCAGGTCAGGGGAGGCGGCGAAGCTCAGGGCAGGGTGAAGAGCACTTTGACCTTGTCGTTGACGGCAGAGGTGTCGATATAGCCGATGGCATTGGCCTCGCTGCCCACCTTGGC  >  NC_002947/3219271‑3219567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.